betaproteobacteria

Summary

Summary: A class in the phylum PROTEOBACTERIA comprised of chemoheterotrophs and chemoautotrophs which derive nutrients from decomposition of organic material.

Top Publications

  1. ncbi Ammonia-oxidizing bacteria: a model for molecular microbial ecology
    G A Kowalchuk
    Netherlands Institute of Ecology, Centre for Terrestrial Ecology, Boterhoeksestraat 48, P O Box 40, Heteren, 6666 ZG, The Netherlands
    Annu Rev Microbiol 55:485-529. 2001
  2. ncbi Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria
    Jeanette M Norton
    Department of Plants, Soils and Biometeorology, Utah State University, Logan, UT 84322 4820, USA
    Arch Microbiol 177:139-49. 2002
  3. ncbi Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria
    Cindy H Nakatsu
    Department of Agronomy, Purdue University, West Lafayette, IN 47907 2054, USA
    Int J Syst Evol Microbiol 56:983-9. 2006
  4. pmc An interdependent metabolic patchwork in the nested symbiosis of mealybugs
    John P McCutcheon
    Center for Insect Science, University of Arizona, Tucson, AZ 85721, USA
    Curr Biol 21:1366-72. 2011
  5. ncbi Phylogenetic validation of the genera Angomonas and Strigomonas of trypanosomatids harboring bacterial endosymbionts with the description of new species of trypanosomatids and of proteobacterial symbionts
    Marta M G Teixeira
    Department of Parasitology, ICB, University of Sao Paulo USP, Sao Paulo, 05508 000, SP, Brazil
    Protist 162:503-24. 2011
  6. ncbi Legume-nodulating betaproteobacteria: diversity, host range, and future prospects
    Prasad Gyaneshwar
    Department of Biological Sciences, University of Wisconsin Milwaukee, Milwaukee, WI, USA
    Mol Plant Microbe Interact 24:1276-88. 2011
  7. ncbi Acidovorax-like symbionts in the nephridia of earthworms
    Andreas Schramm
    Department of Ecological Microbiology, University of Bayreuth, D 95440 Bayreuth, Germany
    Environ Microbiol 5:804-9. 2003
  8. pmc Abundance of ammonia-oxidizing archaea and bacteria along an estuarine salinity gradient in relation to potential nitrification rates
    Anne E Bernhard
    Department of Biology, Connecticut College, New London, Connecticut, USA
    Appl Environ Microbiol 76:1285-9. 2010
  9. ncbi Nodulation of legumes by members of the beta-subclass of Proteobacteria
    L Moulin
    Laboratoire des Symbioses Tropicales et Méditerranéennes, IRD INRA CIRAD ENSAM Baillarguet, Montpellier, France
    Nature 411:948-50. 2001
  10. pmc Broad habitat range of the phylogenetically narrow R-BT065 cluster, representing a core group of the Betaproteobacterial genus Limnohabitans
    Karel Simek
    Biology Centre AS CR, Hydrobiological Institute, Ceske Budejovice, Czech Republic
    Appl Environ Microbiol 76:631-9. 2010

Research Grants

Detail Information

Publications232 found, 100 shown here

  1. ncbi Ammonia-oxidizing bacteria: a model for molecular microbial ecology
    G A Kowalchuk
    Netherlands Institute of Ecology, Centre for Terrestrial Ecology, Boterhoeksestraat 48, P O Box 40, Heteren, 6666 ZG, The Netherlands
    Annu Rev Microbiol 55:485-529. 2001
    ....
  2. ncbi Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria
    Jeanette M Norton
    Department of Plants, Soils and Biometeorology, Utah State University, Logan, UT 84322 4820, USA
    Arch Microbiol 177:139-49. 2002
    ..Electronic supplementary material to this paper can be obtained by using the Springer LINK server located at http://dx.doi.org/10.1007/s00203-001-0369-z...
  3. ncbi Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria
    Cindy H Nakatsu
    Department of Agronomy, Purdue University, West Lafayette, IN 47907 2054, USA
    Int J Syst Evol Microbiol 56:983-9. 2006
    ..Analysis of the 16S rRNA gene sequence indicated that this bacterium was a member of the class Betaproteobacteria in the Sphaerotilus-Leptothrix group...
  4. pmc An interdependent metabolic patchwork in the nested symbiosis of mealybugs
    John P McCutcheon
    Center for Insect Science, University of Arizona, Tucson, AZ 85721, USA
    Curr Biol 21:1366-72. 2011
    ..an unnamed gammaproteobacteria, for which we propose the name Candidatus Moranella endobia, lives inside the betaproteobacteria Candidatus Tremblaya princeps [8]...
  5. ncbi Phylogenetic validation of the genera Angomonas and Strigomonas of trypanosomatids harboring bacterial endosymbionts with the description of new species of trypanosomatids and of proteobacterial symbionts
    Marta M G Teixeira
    Department of Parasitology, ICB, University of Sao Paulo USP, Sao Paulo, 05508 000, SP, Brazil
    Protist 162:503-24. 2011
    ..analyses based on 16S rDNA and ITS rDNA sequences demonstrated that all of the endosymbionts belonged to the Betaproteobacteria and revealed three new species...
  6. ncbi Legume-nodulating betaproteobacteria: diversity, host range, and future prospects
    Prasad Gyaneshwar
    Department of Biological Sciences, University of Wisconsin Milwaukee, Milwaukee, WI, USA
    Mol Plant Microbe Interact 24:1276-88. 2011
    ..Alphaproteobacteria, some legumes, such as those in the large genus Mimosa, are nodulated predominantly by betaproteobacteria in the genera Burkholderia and Cupriavidus...
  7. ncbi Acidovorax-like symbionts in the nephridia of earthworms
    Andreas Schramm
    Department of Ecological Microbiology, University of Bayreuth, D 95440 Bayreuth, Germany
    Environ Microbiol 5:804-9. 2003
    ..Given the close phylogenetic relationship of the symbionts to proteolytic, free-living Acidovorax species, they may indeed play a role in protein degradation during nitrogen excretion by earthworms...
  8. pmc Abundance of ammonia-oxidizing archaea and bacteria along an estuarine salinity gradient in relation to potential nitrification rates
    Anne E Bernhard
    Department of Biology, Connecticut College, New London, Connecticut, USA
    Appl Environ Microbiol 76:1285-9. 2010
    ..However, AOA abundance did not correlate with potential nitrification rates. This lack of correlation may be due to methodological limitations or alternative energy sources...
  9. ncbi Nodulation of legumes by members of the beta-subclass of Proteobacteria
    L Moulin
    Laboratoire des Symbioses Tropicales et Méditerranéennes, IRD INRA CIRAD ENSAM Baillarguet, Montpellier, France
    Nature 411:948-50. 2001
    ..Here we report the identification of proteobacteria from the beta-subclass that nodulate legumes. This finding shows that the ability to establish a symbiosis with legumes is more widespread in bacteria than anticipated to date...
  10. pmc Broad habitat range of the phylogenetically narrow R-BT065 cluster, representing a core group of the Betaproteobacterial genus Limnohabitans
    Karel Simek
    Biology Centre AS CR, Hydrobiological Institute, Ceske Budejovice, Czech Republic
    Appl Environ Microbiol 76:631-9. 2010
    The distribution of the phylogenetically narrow R-BT065 cluster (Betaproteobacteria) in 102 freshwater lakes, reservoirs, and various ponds located in central Europe (a total of 122 samples) was examined by using a cluster-specific ..
  11. ncbi Biology bacteriocyte-associated endosymbionts of plant sap-sucking insects
    Paul Baumann
    Microbiology Section, University of California, Davis, California 95616, USA
    Annu Rev Microbiol 59:155-89. 2005
    ....
  12. pmc Biphenyl-metabolizing bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls as revealed by stable isotope probing
    Ondrej Uhlik
    Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, Institute of Chemical Technology Prague, Technicka 3, 166 28 Prague 6, Czech Republic
    Appl Environ Microbiol 75:6471-7. 2009
    ..to derive carbon from biphenyl in this nutrient-amended microcosm-based study belonged mostly to the class Betaproteobacteria and were identified as Achromobacter spp., Variovorax spp., Methylovorus spp., or Methylophilus spp...
  13. ncbi Bioenergetic models for acetate and phosphate transport in bacteria important in enhanced biological phosphorus removal
    Luke C Burow
    Advanced Wastewater Management Centre, The University of Queensland, St Lucia, QLD 4072, Australia
    Environ Microbiol 10:87-98. 2008
    ..Activity of a high-velocity Pst system in Accumulibacter spp. may further explain its ability to compete strongly in EBPR...
  14. ncbi Structure and function of the microbial community in a full-scale enhanced biological phosphorus removal plant
    Yunhong Kong
    Department of Biotechnology, Chemistry and Environmental Engineering, Aalborg University, DK 9000 Aalborg, Denmark
    Microbiology 153:4061-73. 2007
    ..that six hitherto undescribed probe-defined groups within the phylum Bacteroidetes (two groups), and classes Betaproteobacteria (two groups) and Gammaproteobacteria (two groups), were relatively abundant (>1% of total biovolume) in the ..
  15. pmc Alga-derived substrates select for distinct Betaproteobacterial lineages and contribute to niche separation in Limnohabitans strains
    Karel Simek
    Biology Centre of the Academy of Sciences of the Czech Republic, Hydrobiological Institute v v i, Na Sadkach 7, CZ 37005 Ceske Budejovice, Czech Republic
    Appl Environ Microbiol 77:7307-15. 2011
    We examined the proportions of major Betaproteobacteria subgroups within bacterial communities in diverse nonaxenic, monospecific cultures of algae or cyanobacteria: four species of cryptophyta (genera Cryptomonas and Rhodomonas), four ..
  16. pmc Structure, function, and evolution of the Thiomonas spp. genome
    Florence Arsène-Ploetze
    Genetique Moleculaire, Génomique et Microbiologie, UMR7156 CNRS and Université de Strasbourg, Strasbourg, France
    PLoS Genet 6:e1000859. 2010
    ..Our results suggest that the Thiomonas genome has evolved through the gain or loss of genomic islands and that this evolution is influenced by the specific environmental conditions in which the strains live...
  17. pmc Carbon and arsenic metabolism in Thiomonas strains: differences revealed diverse adaptation processes
    Christopher G Bryan
    Genetique Moleculaire, Génomique et Microbiologie, UMR 7156 CNRS and Université de Strasbourg, Strasbourg, France
    BMC Microbiol 9:127. 2009
    ..Ynys1 and T. perometabolis are not. Moreover, T. arsenivorans and 3As present interesting physiological traits, in particular that these strains are able to use As(III) as an electron donor...
  18. pmc Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake
    Martin W Hahn
    Institute for Limnology, Austrian Academy of Sciences, Mondseestrasse 9, A 5310 Mondsee, Austria
    Int J Syst Evol Microbiol 60:1358-65. 2010
    ..analysis of 16S rRNA gene sequences revealed the affiliation of the strain with the family Comamonadaceae (Betaproteobacteria); however, the phylogenetic position of the strain did not support an affiliation to any previously ..
  19. pmc Grassland management regimens reduce small-scale heterogeneity and species diversity of beta-proteobacterial ammonia pxidizer populations
    Gordon Webster
    Department of Molecular and Cell Biology, Institute of Medical Sciences, University of Aberdeen, Foresterhill, Aberdeen, AB25 2ZD, United Kingdom
    Appl Environ Microbiol 68:20-30. 2002
    ..The results therefore demonstrate significant effects of soil management on diversity and heterogeneity of ammonia oxidizer populations that are related to similar changes in relevant soil characteristics...
  20. pmc Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of beta-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir
    Karel Simek
    Hydrobiological Institute of the Academy of Sciences of the Czech Republic, Na Sadkach 7, CZ 37005 Ceske Budejovice, Czech Republic
    Appl Environ Microbiol 71:2381-90. 2005
    ..In contrast, increasing protistan bacterivory yielded lower proportions of R-BT065-positive and HNA bacteria substituted by increasing proportions of the class Actinobacteria, which profited from the enhanced protistan bacterivory...
  21. pmc Infection dynamics of coexisting beta- and gammaproteobacteria in the nested endosymbiotic system of mealybugs
    Marie Kono
    Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology, Tsukuba 305 8566, Japan
    Appl Environ Microbiol 74:4175-84. 2008
    ..e., "Candidatus Tremblaya princeps," and formed a compact clade in the Betaproteobacteria. Meanwhile, the latter bacterium was related to the gamma-endosymbionts of other mealybugs but belonged to ..
  22. pmc Members of a readily enriched beta-proteobacterial clade are common in surface waters of a humic lake
    Ulrike Burkert
    Leibniz Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany
    Appl Environ Microbiol 69:6550-9. 2003
    ..We suggest that the pelagic microbial community of the studied system harbors two major components with fundamentally different growth strategies...
  23. ncbi Physiological and taxonomic description of the novel autotrophic, metal oxidizing bacterium, Pseudogulbenkiania sp. strain 2002
    Karrie A Weber
    Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA
    Appl Microbiol Biotechnol 83:555-65. 2009
    ..gene sequence placed strain 2002 in a clade within the family Neisseriaceae in the order Nessieriales of the Betaproteobacteria 99.3% similar to Pseudogulbenkiania subflava. Similar to P...
  24. ncbi Radiolabelled proteomics to determine differential functioning of Accumulibacter during the anaerobic and aerobic phases of a bioreactor operating for enhanced biological phosphorus removal
    Margaret Wexler
    School of Biological Sciences, University of East Anglia, Norwich NR4 7TJ, UK
    Environ Microbiol 11:3029-44. 2009
    ..We hypothesize that this is associated with increased anaerobic phospholipid membrane biosynthesis, to accommodate intracellular polyhydroxyalkanoate granules...
  25. ncbi Tetrathiobacter kashmirensis gen. nov., sp. nov., a novel mesophilic, neutrophilic, tetrathionate-oxidizing, facultatively chemolithotrophic betaproteobacterium isolated from soil from a temperate orchard in Jammu and Kashmir, India
    Wriddhiman Ghosh
    Department of Microbiology, Bose Institute, Kolkata 700 054, India
    Int J Syst Evol Microbiol 55:1779-87. 2005
    ..strains, which revealed a high degree of similarity (> or =99%) among them and placed the cluster in the 'Betaproteobacteria'. The strains showed low levels (93.5-95...
  26. ncbi Proton motive force generation from stored polymers for the uptake of acetate under anaerobic conditions
    Aaron M Saunders
    Advanced Wastewater Management Centre, The University of Queensland, St Lucia, Queensland, Australia
    FEMS Microbiol Lett 274:245-51. 2007
    ..Stored polymers were used to generate the PMF -Accumulibacter used phosphate efflux through the Pit transporter, while Competibacter generated a PMF by proton efflux through the ATPase and fumarate reductase in the reductive TCA cycle...
  27. ncbi Microbial distribution of Accumulibacter spp. and Competibacter spp. in aerobic granules from a lab-scale biological nutrient removal system
    Romain Lemaire
    Advanced Water Management Centre, The University of Queensland, St Lucia, Brisbane, Australia
    Environ Microbiol 10:354-63. 2008
    ..was responsible for denitrification in this SBR. This is undesirable for SNDPR as savings in carbon demand cannot be fulfilled with phosphorus removal and denitrification being achieved by different groups of bacteria...
  28. pmc Diversity of bacteria growing in natural mineral water after bottling
    Alexander Loy
    Abteilung für Mikrobielle Okologie, Institut für Okologie und Naturschutz, Universitat Wien, Althanstr 14, A 1090 Vienna, Austria
    Appl Environ Microbiol 71:3624-32. 2005
    ..that Gammaproteobacteria are the most important bacterial components of natural mineral water in bottles, Betaproteobacteria dominated the growing bacterial community and accounted for 80 to 98% of all bacteria detected by FISH in ..
  29. ncbi Obtaining highly enriched cultures of Candidatus Accumulibacter phosphates through alternating carbon sources
    Huabing Lu
    Advanced Wastewater Management Centre AWMC, The University of Queensland, St Lucia, Brisbane 4072, Australia
    Water Res 40:3838-48. 2006
    ..This feeding strategy is recommended for future studies focused on describing the physiology and biochemistry of Accumulibacter, where a highly-enriched culture of this organism is of high importance...
  30. ncbi Simultaneous nitrification, denitrification, and phosphorus removal from nutrient-rich industrial wastewater using granular sludge
    Gulsum Yilmaz
    Advanced Water Management Centre AWMC, The University of Queensland, St Lucia, QLD 4072, Australia
    Biotechnol Bioeng 100:529-41. 2008
    ....
  31. pmc The bacterial community composition of the surface microlayer in a high mountain lake
    Paul Hörtnagl
    Laboratory of Aquatic Photobiology and Plankton Ecology, Institute of Ecology, University of Innsbruck, Innsbruck, Austria
    FEMS Microbiol Ecol 73:458-67. 2010
    ..The bacterial community of the SML and the ULW was dominated by Betaproteobacteria and Actinobacteria...
  32. pmc Contrasting ability to take up leucine and thymidine among freshwater bacterial groups: implications for bacterial production measurements
    Maria Teresa Perez
    Laboratory of Aquatic Photobiology and Plankton Ecology, Institute of Ecology, University of Innsbruck, Technikerstrasse 25, 6020 Innsbruck, Austria
    Environ Microbiol 12:74-82. 2010
    ..When a saturating substrate concentration in combination with a short incubation was used, 80-90% of Betaproteobacteria and 67-79% of Actinobacteria were positive for leucine uptake, whereas thymidine was taken up by < 10% of ..
  33. pmc Low intraspecific diversity in a polynucleobacter subcluster population numerically dominating bacterioplankton of a freshwater pond
    Martin W Hahn
    Institute for Limnology, Austrian Academy of Sciences, Mondseestrasse 9, A 5310 Mondsee, Austria
    Appl Environ Microbiol 71:4539-47. 2005
    ..methods were combined to investigate the microdiversity of a Polynucleobacter subcluster population (Betaproteobacteria) numerically dominating the bacterioplankton of a small, humic freshwater pond...
  34. pmc Correlation of the abundance of betaproteobacteria on mineral surfaces with mineral weathering in forest soils
    C Lepleux
    INRA, UMR 1136 INRA Nancy Université Interactions Arbres Micro organismes, Centre INRA de Nancy, Champenoux, France
    Appl Environ Microbiol 78:7114-9. 2012
    ..16S rRNA gene sequences revealed a significant correlation between apatite dissolution and the abundance of betaproteobacteria on apatite surfaces, suggesting a role for the bacteria belonging to this phylum in mineral weathering...
  35. ncbi Betaproteobacteria dominance and diversity shifts in the bacterial community of a PAH-contaminated soil exposed to phenanthrene
    Florence Martin
    CEA, DSV, iRTSV, Laboratoire de Chimie et Biologie des Metaux, Grenoble, France
    Environ Pollut 162:345-53. 2012
    ..At 337 ppm, PAH degraders became dominated after 5 days by Betaproteobacteria, including novel Acidovorax, Rhodoferax and Hydrogenophaga members, and unknown bacteria related to ..
  36. pmc Regulation of photosynthesis genes in Rubrivivax gelatinosus: transcription factor PpsR is involved in both negative and positive control
    Anne Soisig Steunou
    Centre de Génétique Moléculaire CNRS UPR 2167, 91198 Gif sur Yvette, France
    J Bacteriol 186:3133-42. 2004
    ..Inspection of the putative PpsR-binding consensus sequences revealed significant differences that may explain the different levels of expression of the two genes studied...
  37. pmc Distribution of typical freshwater bacterial groups is associated with pH, temperature, and lake water retention time
    Eva S Lindström
    Limnology Department of Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Norbyv 20, SE 75236 Uppsala, Sweden
    Appl Environ Microbiol 71:8201-6. 2005
    ..Within the beta subdivision of the Proteobacteria (Betaproteobacteria), as well as within the divisions Actinobacteria and Verrucomicrobia, different subgroups were associated ..
  38. ncbi Oxidation of arsenite by Thiomonas strains and characterization of Thiomonas arsenivorans sp. nov
    Fabienne Battaglia-Brunet
    BRGM, Environment and Process Division, Biotechnology Unit, 2 av Claude Guillemin, 45060, Orléans cedex 02, France
    Antonie Van Leeuwenhoek 89:99-108. 2006
    ..intermedia showed less than 50% homology. On the basis of phylogenetic and phenotypic characteristics, strain b6(T) (DSM 16361(T), LMG 22795(T)) is proposed as the type strain of the new species Thiomonas arsenivorans, sp. nov...
  39. ncbi Spatio-temporal niche separation of planktonic Betaproteobacteria in an oligo-mesotrophic lake
    Michaela M Salcher
    Department of Limnology, Institute of Plant Biology, University of Zurich, Seestrasse 187, CH 8802 Kilchberg, Switzerland
    Environ Microbiol 10:2074-86. 2008
    We investigated the diversity of planktonic Betaproteobacteria and the seasonal population changes of betaproteobacterial taxa in an oligo-mesotrophic lake (Piburger See, Austria)...
  40. ncbi Evidence for bacteriophage activity causing community and performance changes in a phosphorus-removal activated sludge
    Jeremy J Barr
    Advanced Water Management Centre AWMC, The University of Queensland UQ, Brisbane, QLD, Australia
    FEMS Microbiol Ecol 74:631-42. 2010
    ..These findings suggest that bacteriophage may play a significant role in determining the structure and function of bacterial communities in activated sludges...
  41. ncbi Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
    Hector Garcia Martin
    DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, California 94598, USA
    Nat Biotechnol 24:1263-9. 2006
    ..The present study provides a much needed blueprint for a systems-level understanding of EBPR and illustrates that metagenomics enables detailed, often novel, insights into even well-studied biological systems...
  42. ncbi Metatranscriptomic array analysis of 'Candidatus Accumulibacter phosphatis'-enriched enhanced biological phosphorus removal sludge
    Shaomei He
    Department of Civil and Environmental Engineering, University of Wisconsin at Madison, Madison, WI 53706, USA
    Environ Microbiol 12:1205-17. 2010
    ..Nitrous oxide reductase was among the very few Accumulibacter genes upregulated in the anaerobic sample, suggesting that its expression is likely induced by the deprivation of oxygen...
  43. pmc An Acanthamoeba sp. containing two phylogenetically different bacterial endosymbionts
    Eva Heinz
    Department of Microbial Ecology, Faculty of Life Sciences, University of Vienna, A 1090 Vienna, Austria
    Environ Microbiol 9:1604-9. 2007
    ..16S rRNA sequence analysis assigned these symbionts to the candidate genus Procabacter (Betaproteobacteria) and the genus Parachlamydia (Chlamydiae) respectively...
  44. pmc Polyphosphate kinase from activated sludge performing enhanced biological phosphorus removal
    Katherine D McMahon
    Department of Civil Engineering, University of California at Berkeley, Berkeley, California 94720 1460, USA
    Appl Environ Microbiol 68:4971-8. 2002
    ..The purified PPK has a specific activity comparable to that of other PPKs, has a requirement for Mg(2+), and does not appear to operate in reverse. PPK activity was found mainly in the particulate fraction of lysed sludge microorganisms...
  45. ncbi Organization and expression of photosynthesis genes and operons in anoxygenic photosynthetic proteobacteria
    Sylviane Liotenberg
    CNRS, Centre de Genetique Moleculaire, UPR 2167, Gif sur Yvette, F 91198, France
    Environ Microbiol 10:2267-76. 2008
    ..genes involved in photosynthesis were found clustered and organized in operons in photosynthetic Alpha- and Betaproteobacteria. The discovery of Gammaproteobacteria with a conserved photosynthetic gene cluster revives the questions on ..
  46. ncbi Mealybug beta-proteobacterial endosymbionts contain gamma-proteobacterial symbionts
    C D von Dohlen
    Present address LDN, NICHD, National Institutes of Health, MSC 4480, 9000 Rockville Pike, Bethesda, Maryland 20892, USA
    Nature 412:433-6. 2001
    ..Thus, gamma-Proteobacteria live symbiotically inside beta-Proteobacteria. This is the first report, to our knowledge, of an intracellular symbiosis involving two species of bacteria...
  47. ncbi Changes in the community structure and activity of betaproteobacterial ammonia-oxidizing sediment bacteria along a freshwater-marine gradient
    Thomas E Freitag
    School of Biological Sciences, University of Aberdeen, Cruickshank Building, St Machar Drive, Aberdeen AB24 3UU, UK
    Environ Microbiol 8:684-96. 2006
    ..No sequence with similarity to the Nitrosospira cluster 1 clade was recovered during SIP analysis. The potential role of Nitrosospira cluster 1 in autotrophic ammonia oxidation therefore remains uncertain...
  48. pmc Analysis of ammonia-oxidizing bacteria from hypersaline Mono Lake, California, on the basis of 16S rRNA sequences
    B B Ward
    Institute of Marine Sciences, University of California, Santa Cruz, California, USA
    Appl Environ Microbiol 66:2873-81. 2000
    ..Primers specific for Nitrosococcus oceanus, a marine ammonia-oxidizing bacterium in the gamma subdivision of the Proteobacteria, did not amplify target from any samples...
  49. pmc Secondary (gamma-Proteobacteria) endosymbionts infect the primary (beta-Proteobacteria) endosymbionts of mealybugs multiple times and coevolve with their hosts
    MyLo Ly Thao
    Microbiology Section, University of California Davis, Davis, CA 95616 8665, USA
    Appl Environ Microbiol 68:3190-7. 2002
    ..princeps" are useful in inferring the phylogeny of their mealybug hosts...
  50. ncbi Detailed phylogeny of ammonia-oxidizing bacteria determined by rDNA sequences and DNA homology values
    A Aakra
    Laboratory of Microbial Gene Technology, Department of Chemistry and Biotechnology, Agricultural University of Norway, As
    Int J Syst Evol Microbiol 51:2021-30. 2001
    ..This observation will probably be important for the interpretation of results from studies of natural diversity of AOB...
  51. ncbi A small population of planktonic Flavobacteria with disproportionally high growth during the spring phytoplankton bloom in a prealpine lake
    Michael Zeder
    Limnological Station Kilchberg, University of Zurich, Zurich, Switzerland
    Environ Microbiol 11:2676-86. 2009
    ..Incorporation of BrdU was low in Betaproteobacteria (2 +/- 1%), indicating that these bacteria did not incorporate the tracer...
  52. pmc Bacterial endosymbiont localization in Hyalesthes obsoletus, the insect vector of Bois noir in Vitis vinifera
    Elena Gonella
    Dipartimento di Valorizzazione e Protezione delle Risorse Agroforestali, Via Leonardo da Vinci 44, 10095 Grugliasco, Italy
    Appl Environ Microbiol 77:1423-35. 2011
    ..A high infection rate (81%) was also shown for another symbiont belonging to the Betaproteobacteria, designated the HO1-V symbiont...
  53. ncbi Heterotrophic symbionts of phototrophic consortia: members of a novel diverse cluster of Betaproteobacteria characterized by a tandem rrn operon structure
    Kristina R Pfannes
    Bereich Mikrobiologie, Department Biologie I, Ludwig Maximilians Universitat Munchen, Maria Ward Str 1a, D 80638 München, Germany
    Environ Microbiol 9:2782-94. 2007
    ..We discovered a diverse and previously unknown subgroup of Betaproteobacteria in the chemoclines of freshwater lakes. This group was absent in other freshwater and soil samples...
  54. ncbi Dechloromonas denitrificans sp. nov., Flavobacterium denitrificans sp. nov., Paenibacillus anaericanus sp. nov. and Paenibacillus terrae strain MH72, N2O-producing bacteria isolated from the gut of the earthworm Aporrectodea caliginosa
    Marcus A Horn
    Department of Ecological Microbiology, University of Bayreuth, Germany
    Int J Syst Evol Microbiol 55:1255-65. 2005
    ..nov., Flavobacterium denitrificans sp. nov. and Paenibacillus anaericanus sp. nov., respectively. MH72 is considered a new strain of Paenibacillus terrae...
  55. ncbi Biofilms of As(III)-oxidising bacteria: formation and activity studies for bioremediation process development
    C Michel
    BRGM, 3 avenue C Guillemin, BP36009, 45060, Orleans cedex 2, France
    Appl Microbiol Biotechnol 77:457-67. 2007
    ....
  56. pmc Assimilation of polysaccharides and glucose by major bacterial groups in the Delaware Estuary
    Hila Elifantz
    College of Marine Studies, University of Delaware, Lewes, DE 19958, USA
    Appl Environ Microbiol 71:7799-805. 2005
    ..In contrast, various bacterial groups dominated the assimilation of EPS. Actinobacteria and Betaproteobacteria contributed the most in the freshwater section, whereas Cytophaga-like bacteria and Alpha- and ..
  57. ncbi Confirmation of Thiomonas delicata (formerly Thiobacillus delicatus) as a distinct species of the genus Thiomonas Moreira and Amils 1997 with comments on some species currently assigned to the genus
    Yoko Katayama
    Department of Environmental and Natural Resource Science, Graduate School of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan, and Department of Microbiology, King s College and St Thomas Hospitals, London, UK
    Int J Syst Evol Microbiol 56:2553-7. 2006
    ..An emended formal description of Thiomonas delicata is given. The status of Thiomonas cuprina DSM 5495T as a member of the genus is reconsidered...
  58. pmc Identification, characterization, and classification of genes encoding perchlorate reductase
    Kelly S Bender
    Department of Microbiology, Southern Illinois University, Carbondale, IL 62901, USA
    J Bacteriol 187:5090-6. 2005
    ..The separation of perchlorate reductase as an activity distinct from chlorate reductase was further supported by DNA hybridization analysis of (per)chlorate- and chlorate-reducing strains using the pcrA gene as a probe...
  59. pmc Evaluation of PCR primer selectivity and phylogenetic specificity by using amplification of 16S rRNA genes from betaproteobacterial ammonia-oxidizing bacteria in environmental samples
    Pilar Junier
    Ecole Polytechnique Federale de Lausanne, CH 1015 Lausanne, Switzerland
    Appl Environ Microbiol 74:5231-6. 2008
    The effect of primer specificity for studying the diversity of ammonia-oxidizing betaproteobacteria (betaAOB) was evaluated...
  60. ncbi Ecophysiological differences of betaproteobacterial populations in two hydrochemically distinct compartments of a subtropical lagoon
    Cecilia Alonso
    Limnological Station, Institute of Plant Biology, Seestr 187, CH 8802 Kilchberg, Switzerland
    Environ Microbiol 11:867-76. 2009
    We studied the population sizes and substrate incorporation patterns of three phylogenetic groups of Betaproteobacteria in a coastal subtropical lagoon that is characterized by a sharp transition from humic freshwater to turbid brackish ..
  61. ncbi 16S rRNA and amoA-based phylogeny of 12 novel betaproteobacterial ammonia-oxidizing isolates: extension of the dataset and proposal of a new lineage within the nitrosomonads
    Ulrike Purkhold
    Lehrstuhl fur Mikrobiologie, Technische Universitat Munchen, D 85350 Freising, Germany
    Int J Syst Evol Microbiol 53:1485-94. 2003
    ..In addition, 17 environmentally retrieved 16S rRNA gene sequences not assigned previously and all originating exclusively from marine or estuarine sites clearly belong to this lineage...
  62. pmc Arsenite oxidase aox genes from a metal-resistant beta-proteobacterium
    Daniel Muller
    Laboratoire de Dynamique, Evolution et Expression des Génomes de Micro Organismes, FRE2326 Université Louis Pasteur CNRS, 67083 Strasbourg Cedex, France
    J Bacteriol 185:135-41. 2003
    ....
  63. ncbi Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers
    Sharon Avrahami
    Max Planck Institut fur terrestrische Mikrobiologie, Karl von Frisch Str, 35043 Marburg, Germany
    Environ Microbiol 5:691-705. 2003
    ..Obviously, ammonia oxidizers are able to adapt to soil conditions by changes in the community structure if sufficient time (several weeks) is available...
  64. ncbi High similarity between bacterioneuston and airborne bacterial community compositions in a high mountain lake area
    Anna Hervas
    Group of Limnology Department of Continental Ecology, Centre d Estudis Avançats de Blanes, CEAB CSIC, Accés Cala St Francesc, Blanes, Girona, Spain
    FEMS Microbiol Ecol 67:219-28. 2009
    ..We did not detect unusual taxa in the neuston but rather very common and widespread bacterial groups. Betaproteobacteria and Actinobacteria accounted for >75% of the community composition...
  65. ncbi Cultivation-based and molecular approaches to characterisation of terrestrial and aquatic nitrifiers
    James I Prosser
    Department of Molecular and Cell Biology, Institute of Medical Sciences, University of Aberdeen, Foresterhill, UK
    Antonie Van Leeuwenhoek 81:165-79. 2002
    ....
  66. ncbi An arsenic(III)-oxidizing bacterial population: selection, characterization, and performance in reactors
    F Battaglia-Brunet
    BRGM, Environment and Process Division, Biotechnology Unit, Orleans, France
    J Appl Microbiol 93:656-67. 2002
    ..To select an autotrophic arsenic(III)-oxidizing population, named CASO1, and to evaluate the performance of the selected bacteria in reactors...
  67. pmc Relationship of temporal and spatial variabilities of ammonia-oxidizing bacteria to nitrification rates in Monterey Bay, California
    G D O'Mullan
    Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
    Appl Environ Microbiol 71:697-705. 2005
    ..Although significant genetic variation was detected in AOB populations from both vertical and temporal samples, no significant correlation was detected between diversity and environmental variables or the rate of nitrification...
  68. ncbi Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas
    J D Coates
    Department of Microbiology, Southern Illinois University, Carbondale 62901, USA
    Nature 411:1039-43. 2001
    ..This is the first example, to our knowledge, of an organism of any type that can oxidize benzene anaerobically, and we demonstrate the potential applicability of these organisms to the treatment of contaminated environments...
  69. ncbi Reassessment of the phylogenetic relationships of Thiomonas cuprina
    Donovan P Kelly
    Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, UK
    Int J Syst Evol Microbiol 57:2720-4. 2007
    ..The properties of these three species are re-evaluated, and emended descriptions are provided for the genus Thiomonas and the species Thiomonas cuprina...
  70. ncbi Methyloversatilis universalis gen. nov., sp. nov., a novel taxon within the Betaproteobacteria represented by three methylotrophic isolates
    Marina G Kalyuzhnaya
    Department of Chemical Engineering, University of Washington, Seattle, WA 98195, USA
    Int J Syst Evol Microbiol 56:2517-22. 2006
    ..85-100%, but was below 94% with other members of the Betaproteobacteria, indicating that the isolates represent a novel taxon...
  71. ncbi Identification of genes and proteins involved in the pleiotropic response to arsenic stress in Caenibacter arsenoxydans, a metalloresistant beta-proteobacterium with an unsequenced genome
    Christine Carapito
    LSMBO, Laboratoire de Spectrométrie de Masse Bio Organique ECPM, Bâtiment R5, 67087 Strasbourg, France CNRS UMR 7509 Université Louis Pasteur, Strasbourg, France
    Biochimie 88:595-606. 2006
    ....
  72. pmc Macroscopic streamer growths in acidic, metal-rich mine waters in north wales consist of novel and remarkably simple bacterial communities
    Kevin B Hallberg
    School of Biological Sciences, University of Wales, Bangor LL57 2UW, United Kingdom
    Appl Environ Microbiol 72:2022-30. 2006
    ....
  73. ncbi Obligate bacterial endosymbionts of Acanthamoeba spp. related to the beta-Proteobacteria: proposal of 'Candidatus Procabacter acanthamoebae' gen. nov., sp. nov
    Matthias Horn
    Lehrstuhl fur Mikrobiologie, Technische Universitat Munchen, Freising, Germany
    Int J Syst Evol Microbiol 52:599-605. 2002
    ....
  74. ncbi Comparative in silico analysis of PCR primers suited for diagnostics and cloning of ammonia monooxygenase genes from ammonia-oxidizing bacteria
    Pilar Junier
    Ecole Polytechnique Federale de Lausanne, Lausanne, Switzerland
    FEMS Microbiol Ecol 64:141-52. 2008
    ..Additionally, new primers to amplify the almost complete amoCAB operon of AOB belonging to Betaproteobacteria (betaproteobacterial AOB), a primer pair for DGGE analysis of amoA and specific primers for ..
  75. ncbi Denitrifying degradation of dimethyl phthalate
    Da Wei Liang
    Department of Civil Engineering, The University of Hong Kong, Pokfulam Road, Hong Kong, China
    Appl Microbiol Biotechnol 74:221-9. 2007
    ..They clustered into a group in the alpha-subdivision of Proteobacteria most closely related to denitrifier Bradyrhizobium japonicum USDA110 and several environmental clones...
  76. ncbi Low nitrification rates in acid Scots pine forest soils are due to pH-related factors
    R A Nugroho
    Institute of Ecological Science, Faculty of Earth and Life Sciences, Vrije Universiteit, De Boelelaan 1085, 1081 HV, Amsterdam, The Netherlands
    Microb Ecol 53:89-97. 2007
    ..Our study suggests that low nitrification rates in acidic Scots pine forest soils are due to pH-related factors. Nitrosospira cluster 2 detected in these soils is presumably a urease-positive cluster type of AOB...
  77. ncbi Identification and quantification of uncultivated Proteobacteria associated with pyrene degradation in a bioreactor treating PAH-contaminated soil
    David R Singleton
    Department of Environmental Sciences and Engineering School of Public Health, CB 7431, University of North Carolina, Chapel Hill, NC 27599 7431, USA
    Environ Microbiol 8:1736-45. 2006
    ..These data indicate that the primary pyrene degraders in the bioreactor were uncultivated, low-abundance beta- and gamma-Proteobacteria not previously associated with pyrene degradation...
  78. pmc Culturable psychrotrophic bacterial communities in raw milk and their proteolytic and lipolytic traits
    Elionora Hantsis-Zacharov
    Department of Evolutionary and Environmental Biology, Faculty of Science and Science Education, University of Haifa, Mount Carmel, Haifa 31905, Israel
    Appl Environ Microbiol 73:7162-8. 2007
    ..The four minor classes were Alphaproteobacteria, Betaproteobacteria, Flavobacteria, and Sphingobacteria...
  79. ncbi Description of Pelomonas aquatica sp. nov. and Pelomonas puraquae sp. nov., isolated from industrial and haemodialysis water
    Margarita Gomila
    Area Microbiologia, Departament de Biologia, Universitat de les Illes Balears, and Institut Mediterrani d Estudis Avançats CSIC UIB, 07122 Palma de Mallorca, Illes Balears, Spain
    Int J Syst Evol Microbiol 57:2629-35. 2007
    ..Phylogenetic analysis based on 16S rRNA gene sequences indicated that these isolates belonged to the class Betaproteobacteria and were related to the genus Pelomonas, with 16S rRNA gene sequence similarities higher than 99% with the ..
  80. ncbi Chitinilyticum aquatile gen. nov., sp. nov., a chitinolytic bacterium isolated from a freshwater pond used for Pacific white shrimp culture
    Shu Chen Chang
    Department of Food Science and Technology, Tajen University, 20 Weishin Rd, Yanpu Shiang, Pingtung City 907, Taiwan, Republic of China
    Int J Syst Evol Microbiol 57:2854-60. 2007
    ..analysis of the 16S rRNA gene sequence revealed a clear affiliation of the proposed bacterium to the Betaproteobacteria, most closely related to Chitinibacter tainanensis S1(T), Deefgea rivuli WB 3...
  81. ncbi Methylibium fulvum sp. nov., a member of the Betaproteobacteria isolated from ginseng field soil, and emended description of the genus Methylibium
    Min Ho Yoon
    Department of BioEnvironmental Chemistry, College of Agriculture and Life Sciences, Chungnam National University, Daejeon 305 764, Republic of Korea
    Int J Syst Evol Microbiol 57:2062-6. 2007
    ..Comparative 16S rRNA gene sequence analysis showed that strain Gsoil 322(T) belongs to the class Betaproteobacteria and was most closely related to Methylibium petroleiphilum ATCC BAA-1232(T) (97.5 % sequence similarity)...
  82. ncbi "Bring to lab" of 19 novel species among 60 isolates retrieved from a freshwater pond
    Jaeho Song
    Division of Biology and Ocean Sciences, Inha University, Incheon 402 751, Korea
    J Microbiol Biotechnol 17:168-75. 2007
    ..the novel species, the majority of the strains (20 strains) were affiliated with the Alphaproteobacteria and Betaproteobacteria. The remaining 7 strains were affiliated with the Gammaproteobacteria, Firmicutes, Actinobacteria, and ..
  83. ncbi Methylibium subsaxonicum spec. nov., a betaproteobacterium Isolated from a hardwater rivulet
    Erko Stackebrandt
    German Collection of Microorganisms and Cell Cultures GmbH, Inhoffenstr Braunschweig, Germany
    Curr Microbiol 56:298-305. 2008
    ..16S rRNA gene sequence analysis indicated that the isolate was placed within the genus Methylibium, class Betaproteobacteria, distantly related to the type strain Methylibium petroleiphilum LMG 22953(T) (97...
  84. ncbi Undibacterium pigrum gen. nov., sp. nov., isolated from drinking water
    Peter Kampfer
    Institut fur Angewandte Mikrobiologie, Justus Liebig Universitat Giessen, D 35392 Giessen, Germany
    Int J Syst Evol Microbiol 57:1510-5. 2007
    ..and 16S rRNA gene sequence similarities, both strains clearly belong to the family Oxalobacteraceae of the Betaproteobacteria. 16S rRNA gene sequence similarities with members of the most closely related genera of this group (..
  85. ncbi Diversity of aquatic prokaryotic communities in the Cuatro Cienegas basin
    Ana E Escalante
    Departamento de Ecologia Evolutiva, Instituto de Ecologia, Universidad Nacional Autonoma de Mexico, Mexico
    FEMS Microbiol Ecol 65:50-60. 2008
    ..The most abundant phylotypes were Gamma- and Betaproteobacteria, and extreme halophiles...
  86. ncbi Leeia oryzae gen. nov., sp. nov., isolated from a rice field in Korea
    Jee Min Lim
    Korea Research Institute of Bioscience and Biotechnology, 52 Oeundong, Yusong, Daejeon 305 333, Republic of Korea
    Int J Syst Evol Microbiol 57:1204-8. 2007
    ..showed that strain HW7(T) forms a distinct lineage with respect to closely related genera within the class Betaproteobacteria and that the levels of 16S rRNA gene sequence similarity with respect to the type species of related genera ..
  87. pmc The evolution of class 1 integrons and the rise of antibiotic resistance
    Michael Gillings
    Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia
    J Bacteriol 190:5095-100. 2008
    ..We now show that class 1 integrons can be found on the chromosomes of nonpathogenic soil and freshwater Betaproteobacteria. Here they exhibit structural and sequence diversity, an absence of antibiotic resistance genes, and a ..
  88. pmc Stable isotope probing with 15N2 reveals novel noncultivated diazotrophs in soil
    Daniel H Buckley
    Department of Crop and Soil Sciences, 705 Bradfield Hall, Cornell University, Ithaca, NY 14853, USA
    Appl Environ Microbiol 73:3196-204. 2007
    ..the Rhizobiales while the other two represent deeply divergent lineages of noncultivated bacteria within the Betaproteobacteria and Actinobacteria, respectively...
  89. pmc Isolation and characterization of bacteria capable of tolerating the extreme conditions of clean room environments
    Myron T La Duc
    Biotechnology and Planetary Protection Group, M S 89, Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109, USA
    Appl Environ Microbiol 73:2600-11. 2007
    ....
  90. ncbi Rubrivivax benzoatilyticus sp. nov., an aromatic, hydrocarbon-degrading purple betaproteobacterium
    Ch V Ramana
    Department of Plant Sciences, School of Life Sciences, University of Hyderabad, PO Central University, Hyderabad 500 046, India
    Int J Syst Evol Microbiol 56:2157-64. 2006
    ..On the basis of 16S rRNA gene sequence analysis, strain JA2(T) was shown to belong to the class Betaproteobacteria, related to Rubrivivax gelatinosus (99 % sequence similarity)...
  91. ncbi Diversity of alpha-halocarboxylic acid dehalogenases in bacteria isolated from a pristine soil after enrichment and selection on the herbicide 2,2-dichloropropionic acid (Dalapon)
    Julian R Marchesi
    Cardiff School of Biosciences, Main Building, Cardiff University, PO Box 915, UK
    Environ Microbiol 5:48-54. 2003
    ..Isolates DA2 and DA4 contained putative silent dehalogenases. The investigation highlighted the endemic nature of these genes in pristine environments and how diverse these were even from spatially close samples...
  92. ncbi Identification of active methylotroph populations in an acidic forest soil by stable-isotope probing
    Stefan Radajewski
    Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, UK
    Microbiology 148:2331-42. 2002
    ..Results from the (13)CH(3)OH and (13)CH(4) SIP experiments thus provide a rational basis for further investigations into the ecology of methylotroph populations in situ...
  93. ncbi Analysis of microbial diversity in oligotrophic microbial fuel cells using 16S rDNA sequences
    Nguyet Thu Phung
    Water Environment and Remediation Research Center, Korea Institute of Science and Technology, 39 1, Hawolgok dong, Sungbuk Gu, Seoul 136 791, Republic of Korea
    FEMS Microbiol Lett 233:77-82. 2004
    ..Nearly complete 16S rDNA was amplified and sequenced. Over 80% of the clones were Proteobacteria. Betaproteobacteria were the dominant clones (46.2%) in MFCs fed with river water, and about 64...
  94. pmc Community structure of ammonia-oxidizing bacteria within anoxic marine sediments
    Thomas E Freitag
    Department of Molecular and Cell Biology, Institute of Medical Sciences, University of Aberdeen, Foresterhill, Aberdeen AB25 2ZD, Scotland, UK
    Appl Environ Microbiol 69:1359-71. 2003
    ....
  95. ncbi A molecular systematic survey of cultured microbial associates of deep-water marine invertebrates
    Karen Sfanos
    Division of Biomedical Marine Research, Harbor Branch Oceanographic Institution, 5600 U S Hwy 1 Fort Pierce, FL 34946, USA
    Syst Appl Microbiol 28:242-64. 2005
    ..The results of this research will be available online as a searchable taxonomic database (www.hboi.edu/dbmr/dbmr_hbmmd.html)...
  96. pmc Autotrophic ammonia-oxidizing bacteria contribute minimally to nitrification in a nitrogen-impacted forested ecosystem
    Fiona L Jordan
    Department of Environmental Science, University of California, Riverside, CA 92521, USA
    Appl Environ Microbiol 71:197-206. 2005
    ....
  97. ncbi Paucibacter toxinivorans gen. nov., sp. nov., a bacterium that degrades cyclic cyanobacterial hepatotoxins microcystins and nodularin
    Jarkko Rapala
    Finnish Environment Institute, PO Box 140, Fin 00251 Helsinki, Finland
    Int J Syst Evol Microbiol 55:1563-8. 2005
    ..nov., sp. nov. is proposed. The type strain is 2C20(T) (=DSM 16998(T)=HAMBI 2767(T)=VYH 193597(T))...
  98. ncbi Isolation and characterization of bacteria capable of degrading phenol and reducing nitrate under low-oxygen conditions
    Seung Hun Baek
    Department of Biological Sciences, Korean Advanced Institute of Science and Technology, 373 1 Kusong Dong, Yusong gu, Taejon 305 701, Republic of Korea
    Curr Microbiol 47:462-6. 2003
    ..In the case of the remaining eight strains, nitrate reduction was inhibited by 10 mM sodium azide. Of these strains, seven were placed into the gamma-subclass of Proteobacteria...
  99. ncbi Caldimonas taiwanensis sp. nov., a amylase producing bacterium isolated from a hot spring
    Wen Ming Chen
    Department of Seafood Science, National Kaohsiung Marine University, No 142, Hai Chuan Rd Nan Tzu, Kaohsiung City 811, Taiwan
    Syst Appl Microbiol 28:415-20. 2005
    ..Its DNA base ratio was 65.9 mol% G + C. We propose to classify strain On1(T) (= BCRC 17405T = LMG 22827T) as Caldimonas taiwanensis sp. nov...
  100. ncbi Thiobacter subterraneus gen. nov., sp. nov., an obligately chemolithoautotrophic, thermophilic, sulfur-oxidizing bacterium from a subsurface hot aquifer
    Hisako Hirayama
    Subground Animalcule Retrieval SUGAR Project, Japan Agency for Marine Earth Science and Technology JAMSTEC, 2 15 Natsushima cho, Yokosuka 237 0061, Japan
    Int J Syst Evol Microbiol 55:467-72. 2005
    ..On the basis of its physiological and molecular properties, strain C55T (=JCM12421T=DSM 16629T=ATCC BAA-941T) is proposed as the type strain of Thiobacter subterraneus gen. nov., sp. nov...
  101. ncbi Characterization of four olive-mill-wastewater indigenous bacterial strains capable of aerobically degrading hydroxylated and methoxylated monocyclic aromatic compounds
    Diana Di Gioia
    DICASM, Faculty of Engineering, University of Bologna, Viale Risorgimento 2, 40136 Bologna, Italy
    Arch Microbiol 178:208-17. 2002
    ..These features make them excellent candidates for removing the low-molecular-weight phenolic compounds persisting in the effluent following anaerobic digestion of OMWs...

Research Grants2

  1. Genome biology of Francisella tularensis populations
    Andrew Benson; Fiscal Year: 2005
    ....
  2. Butane metabolism in Pseudomonas butanovora
    Daniel Arp; Fiscal Year: 2006
    ..Studies of parallel pathways will be relevant to other metabolic pathways where toxic metabolites are necessarily produced as part of the metabolism of a growth supporting substrate. ..