Genomes and Genes
user computer interface
Summary: The portion of an interactive computer program that issues messages to and receives commands from a user.
Publications370 found, 100 shown here
- InterProScan: protein domains identifierE Quevillon
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Nucleic Acids Res 33:W116-20. 2005..O'Reilly Publishers, Sebastopol, CA, http://www.w3.org/TR/soap/] are also available to the users. Various output formats are supported and include text tables, XML documents, as well as various graphs to help interpret the results...
- TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotesV Matys
BIOBASE GmbH, Halchtersche Strasse 33, D 38304 Wolfenbuttel, Germany
Nucleic Acids Res 34:D108-10. 2006..The here described public releases, TRANSFAC 7.0 and TRANSCompel 7.0, are accessible under http://www.gene-regulation.com/pub/databases.html...
- Haploview: analysis and visualization of LD and haplotype mapsJ C Barrett
Whitehead Institute for Biomedical Research Cambridge, MA 02142, USA
Bioinformatics 21:263-5. 2005..Haploview is a software package that provides computation of linkage disequilibrium statistics and population haplotype patterns from primary genotype data in a visually appealing and interactive interface...
- miRBase: microRNA sequences, targets and gene nomenclatureSam Griffiths-Jones
The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK
Nucleic Acids Res 34:D140-4. 2006..miRBase Sequences is the primary online repository for miRNA sequence data and annotation. miRBase Targets is a comprehensive new database of predicted miRNA target genes. miRBase is available at http://microrna.sanger.ac.uk/...
- TM4: a free, open-source system for microarray data management and analysisA I Saeed
Institute for Genomic Research, Rockville, MD, USA
Biotechniques 34:374-8. 2003
- GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genesElizabeth I Boyle
Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA
Bioinformatics 20:3710-5. 2004..GO::TermFinder can be used on any system on which Perl can be run, either as a command line application, in single or batch mode, or as a web-based CGI script...
- COPASI--a COmplex PAthway SImulatorStefan Hoops
Virginia Bioinformatics Institute, Virginia Tech, Washington St 0477, Blacksburg, VA 24061, USA
Bioinformatics 22:3067-74. 2006..Therefore, there is a big need for software tools that allow access to diverse simulation and modeling methods as well as support for the usage of these methods...
- The UCSC Table Browser data retrieval toolDonna Karolchik
Center for Biomolecular Science and Engineering, University of California Santa Cruz UCSC, School of Engineering, 1156 High Street, Santa Cruz, CA 95064 1077, USA
Nucleic Acids Res 32:D493-6. 2004..The Table Browser User's Guide located on the UCSC website provides instructions and detailed examples for constructing queries and configuring output...
- Mfold web server for nucleic acid folding and hybridization predictionMichael Zuker
Department of Mathematical Sciences, Rensselaer Polytechnic Institute, Troy, NY 12180, USA
Nucleic Acids Res 31:3406-15. 2003..The portal for the mfold web server is http://www.bioinfo.rpi.edu/applications/mfold. This URL will be referred to as 'MFOLDROOT'...
- affy--analysis of Affymetrix GeneChip data at the probe levelLaurent Gautier
Center for Biological Sequence Analysis CBS, Technical University of Denmark, Building 208, 2800 Lyngby, Denmark
Bioinformatics 20:307-15. 2004..The processing of the Affymetrix GeneChip data has been a recent focus for data analysts. Alternatives to the original procedure have been proposed and some of these new methods are widely used...
- Brain-computer interfaces for communication and controlJonathan R Wolpaw
Laboratory of Nervous System Disorders, Wadsworth Center, New York State Department of Health, P O Box 509, Empire State Plaza, Albany, NY 12201 0509, USA
Clin Neurophysiol 113:767-91. 2002....
- Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotationIvica Letunic
EMBL, Meyerhofstrasse 1, 69117 Heidelberg, Germany
Bioinformatics 23:127-8. 2007..Various types of data such as genome sizes or protein domain repertoires can be mapped onto the tree. Export to several bitmap and vector graphics formats is supported. AVAILABILITY: iTOL is available at http://itol.embl.de..
- STRING 8--a global view on proteins and their functional interactions in 630 organismsLars J Jensen
European Molecular Biology Laboratory, Heidelberg, Germany
Nucleic Acids Res 37:D412-6. 2009..Version 8.0 of STRING covers about 2.5 million proteins from 630 organisms, providing the most comprehensive view on protein-protein interactions currently available. STRING can be reached at http://string-db.org/...
- MEME: discovering and analyzing DNA and protein sequence motifsTimothy L Bailey
Institute of Molecular Bioscience, The University of Queensland, St Lucia, QLD 4072, Australia
Nucleic Acids Res 34:W369-73. 2006..This article describes the freely accessible web server and its architecture, and discusses ways to use MEME effectively to find new sequence patterns in biological sequences and analyze their significance...
- BioGRID: a general repository for interaction datasetsChris Stark
Ontario Cancer Institute, Princess Margaret Hospital, 610 University Avenue, Toronto, Ontario, Canada M5G 2M9
Nucleic Acids Res 34:D535-9. 2006..User-customized graphs with embedded protein, gene and interaction attributes can be constructed with a visualization system called Osprey that is dynamically linked to the BioGRID...
- WebGestalt: an integrated system for exploring gene sets in various biological contextsBing Zhang
Graduate School in Genome Science and Technology, University of Tennessee Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
Nucleic Acids Res 33:W741-8. 2005..Exploration of all the 48 gene sets using WebGestalt is available for the public at http://genereg.ornl.gov/webgestalt/wg_enrich.php...
- BindingDB: a web-accessible database of experimentally determined protein-ligand binding affinitiesTiqing Liu
Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, 9600 Gudelsky Drive, Rockville, MD 20850, USA
Nucleic Acids Res 35:D198-201. 2007..The data in BindingDB are linked both to structural data in the PDB via PDB IDs and chemical and sequence searches, and to the literature in PubMed via PubMed IDs...
- ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic informationFabian Glaser
The George S Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv 69978, Israel
Bioinformatics 19:163-4. 2003..We present a new web server, ConSurf, which automates these algorithmic tools. ConSurf may be used for high-throughput characterization of functional regions in proteins...
- CLANS: a Java application for visualizing protein families based on pairwise similarityTancred Frickey
Max Planck Institut fuer Entwicklungsbiologie, Spemannstrasse 35, 72076 Tuebingen, Germany
Bioinformatics 20:3702-4. 2004..AVAILABILITY: CLANS can be downloaded at http://protevo.eb.tuebingen.mpg.de/download...
- The Arabidopsis Information Resource (TAIR): gene structure and function annotationDavid Swarbreck
Carnegie Institution, Department of Plant Biology, 260 Panama St, Stanford, CA 94305, USA
Nucleic Acids Res 36:D1009-14. 2008..A total of 681 new genes and 1002 new splice variants were added. Overall, 10,098 loci (one-third of all loci from the previous TAIR6 release) were updated for the TAIR7 release...
- SWISS-MODEL: An automated protein homology-modeling serverTorsten Schwede
Biozentrum der Universitat Basel, Klingelbergstr 50 70, CH 4056 Basel, Switzerland
Nucleic Acids Res 31:3381-5. 2003..The reliability of SWISS-MODEL is continuously evaluated in the EVA-CM project. The SWISS-MODEL server is under constant development to improve the successful implementation of expert knowledge into an easy-to-use server...
- Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disordersAda Hamosh
Nucleic Acids Res 33:D514-7. 2005..OMIM is an easy and straightforward portal to the burgeoning information in human genetics...
- DrugBank: a knowledgebase for drugs, drug actions and drug targetsDavid S Wishart
Department of Computing Science, University of Alberta, Edmonton, AB, Canada T6G 2E8
Nucleic Acids Res 36:D901-6. 2008..DrugBank has also significantly improved the power and simplicity of its structure query and text query searches. DrugBank is available at http://www.drugbank.ca...
- The RAST Server: rapid annotations using subsystems technologyRamy K Aziz
Fellowship for Interpretation of Genomes, Burr Ridge, IL 60527, USA
BMC Genomics 9:75. 2008..The number of prokaryotic genome sequences becoming available is growing steadily and is growing faster than our ability to accurately annotate them...
- SMART 6: recent updates and new developmentsIvica Letunic
EMBL, Meyerhofstrasse 1, 69012 Heidelberg, Germany
Nucleic Acids Res 37:D229-32. 2009..In addition to the standard web access to the database, users can now query SMART using distributed annotation system (DAS) or through a simple object access protocol (SOAP) based web service...
- Circular genome visualization and exploration using CGViewPaul Stothard
Department of Biological Sciences and Computing Science, University of Alberta Edmonton, Alberta, Canada T6G 2E8
Bioinformatics 21:537-9. 2005..AVAILABILITY: CGView (the standalone application, library or applet), sample input, sample maps and documentation can be obtained from http://wishart.biology.ualberta.ca/cgview/ CONTACT: firstname.lastname@example.org...
- SIFT: Predicting amino acid changes that affect protein functionPauline C Ng
Fred Hutchinson Cancer Research Center, 1100 Fairview Avenue N A1 162, Seattle, WA 98109, USA
Nucleic Acids Res 31:3812-4. 2003..We have shown that SIFT can distinguish between functionally neutral and deleterious amino acid changes in mutagenesis studies and on human polymorphisms. SIFT is available at http://blocks.fhcrc.org/sift/SIFT.html...
- MATCH: A tool for searching transcription factor binding sites in DNA sequencesA E Kel
BIOBASE GmbH, Halchtersche Str 33, D 38304 Wolfenbuttel, Germany
Nucleic Acids Res 31:3576-9. 2003..com/pub/programs.html#match. The same program with a different web interface can be found at http://compel.bionet.nsc.ru/Match/Match.html. An advanced version of the tool called Match Professional is available at http://www.biobase.de...
- Protein structure prediction and analysis using the Robetta serverDavid E Kim
Structural Genomics of Pathogenic Protozoa, Department of Biochemistry, University of Washington, Seattle WA 98195, USA
Nucleic Acids Res 32:W526-31. 2004..The Rosetta protein design and protein-protein docking methodologies will soon be available through the server as well...
- ExPASy: The proteomics server for in-depth protein knowledge and analysisElisabeth Gasteiger
Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1 rue Michel Servet, 1211 Geneva 4, Switzerland
Nucleic Acids Res 31:3784-8. 2003..ExPASy started to operate in 1993, as the first WWW server in the field of life sciences. In addition to the main site in Switzerland, seven mirror sites in different continents currently serve the user community...
- ACT: the Artemis Comparison ToolTim J Carver
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK
Bioinformatics 21:3422-3. 2005..ACT is part of the Artemis distribution and is similarly open source, written in Java and can run on any Java enabled platform, including UNIX, Macintosh and Windows...
- ESEfinder: A web resource to identify exonic splicing enhancersLuca Cartegni
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
Nucleic Acids Res 31:3568-71. 2003....
- AUGUSTUS: a web server for gene finding in eukaryotesMario Stanke
University of Gottingen, Institut fur Mikrobiologie und Genetik, Goldschmidtstrasse 1, 37077 Gottingen, Germany
Nucleic Acids Res 32:W309-12. 2004..The advantage of our program becomes apparent especially for larger input sequences containing more than one gene. The server is available at http://augustus.gobics.de...
- OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groupsFeng Chen
Department of Chemistry, Center for Bioinformatics, Penn Genomics Institute, University of Pennsylvania, Philadelphia, PA 19104 6018, USA
Nucleic Acids Res 34:D363-8. 2006..OrthoMCL-DB provides a centralized warehouse for orthology prediction among multiple species, and will be updated and expanded as additional genome sequence data become available...
- Neuronal ensemble control of prosthetic devices by a human with tetraplegiaLeigh R Hochberg
Department of Neurology, Massachusetts General Hospital, Brigham and Women s Hospital, and Spaulding Rehabilitation Hospital, Harvard Medical School, 55 Fruit Street, Boston, Massachusetts 02114, USA
Nature 442:164-71. 2006..These early results suggest that NMPs based upon intracortical neuronal ensemble spiking activity could provide a valuable new neurotechnology to restore independence for humans with paralysis...
- BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networksSteven Maere
Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology VIB, Ghent University, Technologiepark 927, B 9052, Ghent, Belgium
Bioinformatics 21:3448-9. 2005....
- JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 updateJan Christian Bryne
Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thormøhlensgate 55, N 5008 Bergen, Norway
Nucleic Acids Res 36:D102-6. 2008..JASPAR is available at http://jaspar.genereg.net...
- affylmGUI: a graphical user interface for linear modeling of single channel microarray dataJames M Wettenhall
Bioinformatics Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Pde, Parkville 3050, Australia
Bioinformatics 22:897-9. 2006..Output of the analysis (tables and figures) can be exported to an HTML report. The GUI provides user-friendly access to state-of-the-art methods embodied in the Bioconductor software repository...
- GeneTrail--advanced gene set enrichment analysisChristina Backes
Center for Bioinformatics, Saarland University, Building E1 1, 66041 Saarbrucken, Germany
Nucleic Acids Res 35:W186-92. 2007..GeneTrail is freely accessible at http://genetrail.bioinf.uni-sb.de...
- ProteoWizard: open source software for rapid proteomics tools developmentDarren Kessner
Spielberg Family Center for Applied Proteomics, Cedars Sinai Medical Center, USA
Bioinformatics 24:2534-6. 2008..In addition to the library, we also introduce a rapidly growing set of companion tools whose implementation helps to illustrate the simplicity of developing applications on top of the ProteoWizard library...
- The HHpred interactive server for protein homology detection and structure predictionJohannes Söding
Department of Protein Evolution, Max Planck Institute for Developmental Biology Spemannstrasse 35, 72076 Tubingen, Germany
Nucleic Acids Res 33:W244-8. 2005..A detailed help facility is available. As a demonstration, we analyze the sequence of SpoVT, a transcriptional regulator from Bacillus subtilis. HHpred can be accessed at http://protevo.eb.tuebingen.mpg.de/hhpred...
- NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteinsKim D Pruitt
National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Rm 6An 12J, 45 Center Drive, Bethesda, MD 20892 6510, USA
Nucleic Acids Res 33:D501-4. 2005....
- Ligand Depot: a data warehouse for ligands bound to macromoleculesZukang Feng
Protein Data Bank, Research Collaboratory for Structural Bioinformatics, Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, 610 Taylor Road, Piscataway, NJ 08854, USA
Bioinformatics 20:2153-5. 2004..rutgers.edu/. Version 1.0 supports multiple operating systems including Windows, Unix, Linux and the Macintosh operating system. The current drawing tool works in Internet Explorer, Netscape and Mozilla on Windows, Unix and Linux...
- Java Treeview--extensible visualization of microarray dataAlok J Saldanha
Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA
Bioinformatics 20:3246-8. 2004..An applet version is also available that can be used on any website with no special server-side setup...
- Reactome: a knowledgebase of biological pathwaysG Joshi-Tope
Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA
Nucleic Acids Res 33:D428-32. 2005..The database is publicly available under open source terms, which allows both its content and its software infrastructure to be freely used and redistributed...
- CD-Search: protein domain annotations on the flyAron Marchler-Bauer
Computational Biology Branch, NCBI, National Library of Medicine, NIH, Building 38A, Room 5S508, 8600 Rockville Pike, Bethesda, MD 20894, USA
Nucleic Acids Res 32:W327-31. 2004..CD-Search can be accessed at http://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi...
- ClusPro: a fully automated algorithm for protein-protein dockingStephen R Comeau
Bioinformatics Graduate Program, Boston University, 44 Cummington Street, Boston, MA 02215, USA
Nucleic Acids Res 32:W96-9. 2004..The program output is a short list of putative complexes ranked according to their clustering properties, which is automatically sent back to the user via email...
- APD: the Antimicrobial Peptide DatabaseZhe Wang
Eppley Institute for Research in Cancer and Allied Diseases, University of Nebraska Medical Center, 986805 Nebraska Medical Center, Omaha, NE 68198 6805, USA
Nucleic Acids Res 32:D590-2. 2004..APD is a useful tool for studying the structure-function relationship of antimicrobial peptides. The database can be accessed via a web-based browser at the URL: http://aps.unmc.edu/AP/main.html...
- Open source system for analyzing, validating, and storing protein identification dataRobertson Craig
Beavis Informatics Ltd, and Manitoba Center for Proteomics, Winnipeg, Manitoba, Canada
J Proteome Res 3:1234-42. 2004..The components of the system have been made available as open source development projects. A publicly available system has been established, comprised of a group of data analysis servers and one main database server...
- A Chado case study: an ontology-based modular schema for representing genome-associated biological informationChristopher J Mungall
Lawrence Berkeley National Laboratory, Lawrence Berkeley National Lab, Mail Stop 64R0121, Berkeley, CA 94720, USA
Bioinformatics 23:i337-46. 2007..Our question was whether we could create a relational database schema that would be successfully reused...
- SUBA: the Arabidopsis Subcellular DatabaseJoshua L Heazlewood
ARC Centre of Excellence in Plant Energy Biology, School of Biomedical, Biomolecular and Chemical Sciences, The University of Western Australia 35 Stirling Highway, Crawley 6009, Western Australia, Australia
Nucleic Acids Res 35:D213-8. 2007..The SUBA database provides a powerful means by which to assess protein subcellular localisation in Arabidopsis (http://www.suba.bcs.uwa.edu.au)...
- PlantGDB: a resource for comparative plant genomicsJon Duvick
Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011, USA
Nucleic Acids Res 36:D959-65. 2008..PlantGDB also hosts a plant genomics research outreach portal (PGROP) that facilitates access to a large number of resources for research and training...
- FireDock: a web server for fast interaction refinement in molecular dockingEfrat Mashiach
School of Computer Science, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 69978, Israel
Nucleic Acids Res 36:W229-32. 2008..We provide an option for using this protocol by automatic redirection of PatchDock candidate solutions to the FireDock web server for refinement. The FireDock web server is available at http://bioinfo3d.cs.tau.ac.il/FireDock/...
- BASys: a web server for automated bacterial genome annotationGary H Van Domselaar
Department of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada
Nucleic Acids Res 33:W455-9. 2005..The BASys server and databases can also be downloaded and run locally. BASys is accessible at http://wishart.biology.ualberta.ca/basys...
- The PredictProtein serverBurkhard Rost
CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, 650 West 168th Street BB217, New York, NY 10032, USA
Nucleic Acids Res 32:W321-6. 2004..For all services, users can submit their query either by electronic mail or interactively via the World Wide Web...
- NCBI BLAST: a better web interfaceMark Johnson
National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA
Nucleic Acids Res 36:W5-9. 2008..Here, we describe the BLAST web application's new features, explain design decisions and outline plans for future improvement...
- The PeptideAtlas projectFrank Desiere
Institute for Systems Biology, Seattle, WA, USA
Nucleic Acids Res 34:D655-8. 2006..Here we present a summary of our process and details about the Human, Drosophila and Yeast PeptideAtlas builds...
- GRAMM-X public web server for protein-protein dockingAndrey Tovchigrechko
Center for Bioinformatics, The University of Kansas, 2030 Becker Drive, Lawrence, KS 66047, USA
Nucleic Acids Res 34:W310-4. 2006..Docking problems submitted to GRAMM-X server are processed by a 320 processor Linux cluster. The server was extensively tested by benchmarking, several months of public use, and participation in the CAPRI server track...
- IDEG6: a web tool for detection of differentially expressed genes in multiple tag sampling experimentsChiara Romualdi
Department of Biology, University of Padua, 35131 Padua, Italy
Physiol Genomics 12:159-62. 2003..Software is freely available at the site: http://telethon.bio.unipd.it/bioinfo/IDEG6_form/, together with additional information on statistical methodologies...
- I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structureEmidio Capriotti
Laboratory of Biocomputing, CIRB Department of Biology, University of Bologna via Irnerio 42, 40126 Bologna, Italy
Nucleic Acids Res 33:W306-10. 2005..0 as a unique and valuable helper for protein design, even when the protein structure is not yet known with atomic resolution. Availability: http://gpcr.biocomp.unibo.it/cgi/predictors/I-Mutant2.0/I-Mutant2.0.cgi...
- Control of a two-dimensional movement signal by a noninvasive brain-computer interface in humansJonathan R Wolpaw
Laboratory of Nervous System Disorders, Wadsworth Center, New York State Department of Health and State University of New York, Albany, NY 12201 0509, USA
Proc Natl Acad Sci U S A 101:17849-54. 2004..The results suggest that people with severe motor disabilities could use brain signals to operate a robotic arm or a neuroprosthesis without needing to have electrodes implanted in their brains...
- FlyBase : a database for the Drosophila research communityRachel Drysdale
Department of Genetics, University of Cambridge, Cambridge, UK
Methods Mol Biol 420:45-59. 2008..This review will introduce the FlyBase web server and query tools...
- limmaGUI: a graphical user interface for linear modeling of microarray dataJames M Wettenhall
Division of Genetics and Bioinformatics, Walter and Eliza Hall Institute of Medical Research, 1G Royal Pde, Parkville, 3050, Australia
Bioinformatics 20:3705-6. 2004..limmaGUI is available for most platforms on the which R runs including Windows, Mac and most flavors of Unix...
- The UCSC Known GenesFan Hsu
Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz Santa Cruz, CA 95064, USA
Bioinformatics 22:1036-46. 2006..Although UCSC Known Genes offers the highest genomic and CDS coverage among major human and mouse gene sets, more detailed analysis suggests all of them could be further improved...
- From genomics to chemical genomics: new developments in KEGGMinoru Kanehisa
Bioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Kyoto 611 0011, Japan
Nucleic Acids Res 34:D354-7. 2006..Additionally, drug information is now stored separately and linked to new KEGG DRUG structure maps...
- HMDB: the Human Metabolome DatabaseDavid S Wishart
Department of Computing Science, University of Alberta, Edmonton, AB, Canada T6G 2E8
Nucleic Acids Res 35:D521-6. 2007..The HMDB is designed to address the broad needs of biochemists, clinical chemists, physicians, medical geneticists, nutritionists and members of the metabolomics community. The HMDB is available at: www.hmdb.ca...
- SuperPose: a simple server for sophisticated structural superpositionRajarshi Maiti
Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada
Nucleic Acids Res 32:W590-4. 2004..The SuperPose web server is freely accessible at http://wishart.biology.ualberta.ca/SuperPose/...
- The Universal Protein Resource (UniProt)Amos Bairoch
Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1 rue Michel Servet, 1211 Geneva 4, Switzerland
Nucleic Acids Res 33:D154-9. 2005..The UniProt databases can be accessed online (http://www.uniprot.org) or downloaded in several formats (ftp://ftp.uniprot.org/pub). New releases are published every two weeks...
- ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacementKarsten Suhre
Information Génomique and Structurale UPR CNRS 2589, 31, Chemin Joseph Aiguier, 13402 Marseille Cedex 20, France
Nucleic Acids Res 32:W610-4. 2004..The web server can be freely accessed at http://igs-server.cnrs-mrs.fr/elnemo/index.html...
- Applications for protein sequence-function evolution data: mRNA/protein expression analysis and coding SNP scoring toolsPaul D Thomas
Evolutionary Systems Biology Group, SRI International 333 Ravenswood Ave, Menlo Park CA 94025, USA
Nucleic Acids Res 34:W645-50. 2006..All three web services are available at http://www.pantherdb.org/tools...
- SITEHOUND-web: a server for ligand binding site identification in protein structuresMarylens Hernandez
Department of Structural and Chemical Biology, Mount Sinai School of Medicine, New York, NY 10029, USA
Nucleic Acids Res 37:W413-6. 2009..Various downloadable data files are also provided for offline data analysis...
- PatchDock and SymmDock: servers for rigid and symmetric dockingDina Schneidman-Duhovny
School of Computer Science, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 69978, Israel
Nucleic Acids Res 33:W363-7. 2005..The services are available at http://bioinfo3d.cs.tau.ac.il. The methods behind the servers are very efficient, allowing large-scale docking experiments...
- Virtual environments for motor rehabilitation: reviewMaureen K Holden
Department of Brain and Cognitive Sciences, McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
Cyberpsychol Behav 8:187-211; discussion 212-9. 2005....
- The MAPPER database: a multi-genome catalog of putative transcription factor binding sitesVoichita D Marinescu
Children s Hospital Informatics Program, Children s Hospital Boston, Harvard Medical School, Enders Research Building EN 150 9, 300 Longwood Avenue, Boston, MA 02115, USA
Nucleic Acids Res 33:D91-7. 2005..Alternatively, the interface allows the user to retrieve binding sites for a single transcription factor of interest in a single gene or in all genes of the human, mouse or fruit fly genomes...
- JCat: a novel tool to adapt codon usage of a target gene to its potential expression hostAndreas Grote
Institut fur Mikrobiologie, Spielmannstrasse 7, Technische Universitat Braunschweig, D 38106 Braunschweig, Germany
Nucleic Acids Res 33:W526-31. 2005..JCat is integrated into the PRODORIC database that hosts all required information on the various organisms to fulfill the requested calculations. JCat is freely accessible at http://www.prodoric.de/JCat...
- TOPP--the OpenMS proteomics pipelineOliver Kohlbacher
Simulation of Biological Systems, Eberhard Karls University Tübingen Sand 14, 72076 Tubingen, Germany
Bioinformatics 23:e191-7. 2007..In order to facilitate these studies, it would be desirable to have a flexible 'toolbox' of versatile and user-friendly applications allowing for rapid construction of computational workflows in proteomics...
- Optimal spatial filtering of single trial EEG during imagined hand movementH Ramoser
Department of Medical Informatics, Institute of Biomedical Engineering, Graz University of Technology, Austria
IEEE Trans Rehabil Eng 8:441-6. 2000..The method performs a weighting of the electrodes according to their importance for the classification task. The high recognition rates and computational simplicity make it a promising method for an EEG-based brain-computer interface...
- DRTF: a database of rice transcription factorsGe Gao
Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University Beijing 100871, People s Republic of China
Bioinformatics 22:1286-7. 2006..The database can be browsed and searched with a user-friendly web interface. AVAILABILITY: DRTF is available at http://drtf.cbi.pku.edu.cn..
- cisRED: a database system for genome-scale computational discovery of regulatory elementsG Robertson
Canada s Michael Smith Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, BC, Canada
Nucleic Acids Res 34:D68-73. 2006..The database offers information on atomic motifs, motif groups and patterns. It is web-accessible, and can be queried directly, downloaded or installed locally...
- SVM-Prot: Web-based support vector machine software for functional classification of a protein from its primary sequenceC Z Cai
Department of Computational Science, National University of Singapore, Blk SOC1, Level 7, 3 Science Drive 2, Singapore 117543, Singapore
Nucleic Acids Res 31:3692-7. 2003..SVMProt can be accessed at http://jing.cz3.nus.edu.sg/cgi-bin/svmprot.cgi...
- NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genesT Z DeSantis
Lawrence Berkeley National Laboratory, Center for Environmental Biotechnology, Berkeley, CA, USA
Nucleic Acids Res 34:W394-9. 2006..The ability to align and categorize large sequence sets using a simple interface has enabled researchers with various experience levels to obtain bacterial and archaeal community profiles...
- Development of bioinformatics resources for display and analysis of copy number and other structural variants in the human genomeJ Zhang
The Centre for Applied Genomics and the Program in Genetics and Genomic Biology, The Hospital for Sick Children, Toronto, Ontario, Canada
Cytogenet Genome Res 115:205-14. 2006....
- ChEBI: a database and ontology for chemical entities of biological interestKirill Degtyarenko
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
Nucleic Acids Res 36:D344-50. 2008..ChEBI includes an ontological classification, whereby the relationships between molecular entities or classes of entities and their parents and/or children are specified. ChEBI is available online at http://www.ebi.ac.uk/chebi/..
- LIPID MAPS online tools for lipid researchEoin Fahy
LIPID MAPS Bioinformatics Core, San Diego Supercomputer Center, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92037, USA
Nucleic Acids Res 35:W606-12. 2007..The MS prediction tools are available for three categories of lipids: (i) mono/di/triacylglycerols, (ii) glycerophospholipids and (iii) cardiolipins. The LIPID MAPS online tools are publicly available at www.lipidmaps.org/tools/...
- Codon usage tabulated from international DNA sequence databases: status for the year 2000Y Nakamura
Laboratory of Gene Structure 2, Kazusa DNA Research Institute, 1532 3 Yana, Kisarazu, Chiba 292 0812, Japan
Nucleic Acids Res 28:292. 2000..These new tools will provide users with the ability to further analyze for variations in codon usage among different genomes...
- Online predicted human interaction databaseKevin R Brown
Division of Cancer Informatics, Ontario Cancer Institute, University of Toronto, Canada
Bioinformatics 21:2076-82. 2005....
- KEGG for linking genomes to life and the environmentMinoru Kanehisa
Bioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Kyoto, Japan
Nucleic Acids Res 36:D480-4. 2008..KEGG DRUG contains all approved drugs in the US and Japan, and KEGG DISEASE is a new database linking disease genes, pathways, drugs and diagnostic markers...
- Defining participant exposure measures in Web-based health behavior change programsBrian G Danaher
Oregon Research Institute, 1715 Franklin Blvd, Eugene, OR 97403, USA
J Med Internet Res 8:e15. 2006....
- MPIDB: the microbial protein interaction databaseJohannes Goll
The J Craig Venter Institute, Rockville, MD 20850, USA
Bioinformatics 24:1743-4. 2008..In contrast to these databases, interactions in MPIDB are further supported by 8150 additional evidences based on interaction conservation, co-purification and 3D domain contacts (iPfam, 3did)...
- Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysisClaire L Wilson
Paterson Institute for Cancer Research, Manchester M20 4BX, UK
Bioinformatics 21:3683-5. 2005..Simpleaffy also offers fast implementations of popular algorithms for generating expression summaries and detection calls...
- The TIGR Rice Genome Annotation Resource: improvements and new featuresShu Ouyang
The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA
Nucleic Acids Res 35:D883-7. 2007..Enhanced data access is available through web interfaces, FTP downloads and a Data Extractor tool developed in order to support discrete dataset downloads...
- The UCSC Genome Browser Database: update 2006A S Hinrichs
Center for Biomolecular Science and Engineering, School of Engineering, University of California Santa Cruz UCSC, Santa Cruz, CA 95064, USA
Nucleic Acids Res 34:D590-8. 2006..These tools are highly integrated and provide many hyperlinks to other databases and websites. The GBD, browsing tools, downloadable data files and links to documentation and other information can be found at http://genome.ucsc.edu/...
- The non-invasive Berlin Brain-Computer Interface: fast acquisition of effective performance in untrained subjectsBenjamin Blankertz
Fraunhofer FIRST IDA, Kekulestr 7, 12 489 Berlin, Germany
Neuroimage 37:539-50. 2007....
- DrugBank: a comprehensive resource for in silico drug discovery and explorationDavid S Wishart
Department of Computing Science, University of Alberta, Edmonton, AB, Canada T6G 2E8
Nucleic Acids Res 34:D668-72. 2006..DrugBank is available at http://redpoll.pharmacy.ualberta.ca/drugbank/...
- ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteinsEdouard De Castro
Swiss Institute of Bioinformatics, 1 rue Michel Servet, CH 1211 Geneva 4, Switzerland
Nucleic Acids Res 34:W362-5. 2006..Several output modes are available including simple text views and a rich mode providing an interactive match and feature viewer with a graphical representation of results...
- BioPortal: ontologies and integrated data resources at the click of a mouseNatalya F Noy
Stanford Center for Biomedical Informatics Research, Stanford University
Nucleic Acids Res 37:W170-3. 2009..Thus, BioPortal not only provides investigators, clinicians, and developers 'one-stop shopping' to programmatically access biomedical ontologies, but also provides support to integrate data from a variety of biomedical resources...
- MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexesIan W Davis
Department of Biochemistry, Duke University, Durham, NC 27710 3711, USA
Nucleic Acids Res 32:W615-9. 2004..This service is available free to all users at http://kinemage.biochem.duke.edu...
- SNPs3D: candidate gene and SNP selection for association studiesPeng Yue
Center for Advanced Research in Biotechnology, University of Maryland Biotechnology Institute, Rockville, MD 20850, USA
BMC Bioinformatics 7:166. 2006..We describe a web resource and database that provides and integrates as much information as possible on disease/gene relationships at the molecular level...
- A high-performance brain-computer interfaceGopal Santhanam
Department of Electrical Engineering, Stanford University, 330 Serra Mall, 319 Paul G Allen Center for Integrated Systems Annex, Stanford, California 94305 4075, USA
Nature 442:195-8. 2006..These performance results and their implications for system design should substantially increase the clinical viability of BCIs in humans...
- SuperTarget and Matador: resources for exploring drug-target relationshipsStefan Günther
Structural Bioinformatics Group, Institute of Molecular Biology and Bioinformatics, Charite University Medicine Berlin, Arnimallee 22, 14195 Berlin, Germany
Nucleic Acids Res 36:D919-22. 2008..SuperTarget and Matador are available at http://insilico.charite.de/supertarget and http://matador.embl.de...
- JBrowse: a next-generation genome browserMitchell E Skinner
Department of Bioengineering, University of California at Berkeley, Berkeley, California 94720, USA
Genome Res 19:1630-8. 2009....
- BCI2000: SOFTWARE FOR BRAIN-COMPUTER INTERFACE RESEARCHGerwin Schalk; Fiscal Year: 2009..This project will greatly facilitate this development by improving and maintaining general-purpose BCI software and continuing to provide it to BCI research groups throughout the world. ..
- Mediated Integration of Neuroscience ResourcesLuis Marenco; Fiscal Year: 2008..abstract_text> ..
- Interoperation of Genome Databases and ToolsKei Hoi Cheung; Fiscal Year: 2005..We will extend our approach to other types of genomic data such as microarray data, which both laboratories and others will soon be generating in large quantities. ..
- Annual Conference on Computational GenomicsCarol Bult; Fiscal Year: 2008..In subsequent years, The Conference will altemate between the Northeast (Boston/Cambridge) and the Mid-Atlantic Region (Virginia/Maryland). ..
- Cognitive Orthosis with Interactive Task and PlanningEdmund Lopresti; Fiscal Year: 2004..e., astronauts). Evaluation of the Solo system will be conducted through focus groups and usability tests with clinicians, and clinical trials with individuals who have cognitive impairments. ..
- Genome Sequence Analysis: Theory and PracticeCarol Bult; Fiscal Year: 2006..unreadable] [unreadable] [unreadable]..
- A Framework Based Clinical Documentation Evaluation MethodSAMUEL T ROSENBLOOM; Fiscal Year: 2010..The proposed project will transition the PI from his current National Library of Medicine supported period of career development to an independent informatics investigator. ..
- Navigation Assistant for a Wheeled WalkerEdmund Lopresti; Fiscal Year: 2005..Phase II activities will include refining the prototype, implementing software for analyzing the activity level of the user, and testing the system extensively with potential users. ..
- Collaborative Study:Workplace Musculoskeletal DisordersDavid Rempel; Fiscal Year: 2006..Study methods, instruments, and data format will be coordinated with the NIOSH Work-related Musculoskeletal Disorders Consortium. ..
- Smart Wheelchair Component SystemEdmund Lopresti; Fiscal Year: 2007..unreadable] [unreadable]..
- Proactive Risk Reduction in Medication Prescribing in the Ambulatory SettingTerry Field; Fiscal Year: 2007..3. Develop action plans for implementing identified interventions. [unreadable] [unreadable] [unreadable]..
- MouseCyc: A Biochemical Pathway Database for the MouseCarol Bult; Fiscal Year: 2008..The visualization and query interfaces for MouseCyc will further enhance the value of the mouse as a model system for understanding human biology and disease processes. ..
- Virtual Reality and Acute Pain Management for ChildrenLynnda Dahlquist; Fiscal Year: 2007..unreadable] [unreadable]..
- A model for wrist and elbow musculoskeletal disordersDavid Rempel; Fiscal Year: 2004....
- Smart Power Assistance Module for Manual WheelchairsEdmund Lopresti; Fiscal Year: 2003..Extensive outside evaluation of the SPAM will be provided throughout the course of the project by clinicians active in wheelchair seating and mobility. ..
- Using Information Systems to Improve Cardiac PreventionJeffrey Schnipper; Fiscal Year: 2007..Schnipper's development as an independent researcher in improving the quality of care of patients with CAD. ..
- TENDON FORCE DURING OCCUPATIONAL HAND ACTIVITIESDavid Rempel; Fiscal Year: 2001..The proposed study is a collaborative effort between the University of California Ergonomics Program (UCSF), Hand and Microsurgery (UCSP), Mechanical Engineering (UC Berkeley), and the Smith-Kettlewell Eye Research Institute. ..
- EFFECTS OF AN ERGONOMIC INTERVENTION FOR COMPUTER WORKDavid Rempel; Fiscal Year: 2002..5SD) of the pain severity-week score. The total cost of implementing the intervention will be estimated. The findings and recommendations will be disseminated statewide in cooperation with the California Department of Health Services. ..
- Effect of tool design on hand pain in dental practiionersDavid M Rempel; Fiscal Year: 2010..This randomized controlled study will deterimine if dentists or dental hygienists who use such a tool report less hand and arm pain compared to those who continue to use the conventional tool design. ..
- Reverse Engineering Cortical CircuitryWILLIAM LYTTON; Fiscal Year: 2007..This will set the stage for use of the subiculum slice and subiculum computer model as an epilepsy model. ..
- An Internet-based intervention for problem drinkingJohn Cunningham; Fiscal Year: 2008..Secondary hypotheses will address the mediating or moderating role of perceived drinking norms, perceived risk and the problem drinker's social reasons for drinking. ..
- Synergistic CT-Bronchoscopy for Lung-Cancer AssessmentWilliam Higgins; Fiscal Year: 2007..Finally, the methods should be generalizable to other organ systems, in particular to applications in neurology, urology, gynecology and gastroenterology. [unreadable] [unreadable]..
- Virtual Patients for Computing Radiation DosesXie Xu; Fiscal Year: 2007..These two cores then support four parallel clinical projects. [unreadable] [unreadable] [unreadable]..
- Cognitive Enhancer May Facilitate Behavioral ExposureBarbara O Rothbaum; Fiscal Year: 2010..abstract_text> ..
- Dietary Adherence Enhancement in Peritoneal DialysisMARY SEVICK; Fiscal Year: 2007..Measurements will occur as baseline, 4 months, and 8 months for both groups. [unreadable] [unreadable]..
- Perpetration of Partner Violence Among Adolescents from Violent HomesErnest N Jouriles; Fiscal Year: 2010..Identification of risk and protective factors and the processes by which they predict APV will facilitate the development of targeted interventions designed to prevent or arrest the development of APV. ..
- Low power analog electronics for an implantable cortical prostheticRahul Sarpeshkar; Fiscal Year: 2010..It will also enable portable large-scale long-term instrumentation and monitoring of the brain in experimental neuroscience in a wireless fashion. ..
- Naturalistic Assessment of the Driving ability of Cognitively Impaired EldersBRIAN RICHARD OTT; Fiscal Year: 2010....
- Prevention of Postpartum Weight RetentionRena Wing; Fiscal Year: 2009....
- Metacognition and Control in Human Learning MemoryJANET A METCALFE; Fiscal Year: 2010....
- Improving Medication Adherence for Patients with Low Functional Health Literacy: Seth Wolpin; Fiscal Year: 2009..We will utilize "Talking Pill Bottles" (i.e., medication containers with re-recordable audio capacity) to record prescription medication instructions so that patients can re-play the instructions as needed in their homes. ..
- Potential for HIV transmission in relationships of drug-using women in RussiaLinda Niccolai; Fiscal Year: 2008..unreadable] [unreadable] [unreadable]..
- Use of dominant repressor alleles for non-antibiotic selection in Yersinia pestisGregory Phillips; Fiscal Year: 2008..The methods described here will also be applicable to other select agents of bioterrorism. [unreadable] [unreadable] [unreadable]..
- Reduction and Telemetry of Neural Data for an Implantable Data Acquisition SystemMICHAEL RIZK; Fiscal Year: 2008..unreadable] [unreadable] [unreadable]..
- Primary care alcohol intervention in college studentsMichael Fleming; Fiscal Year: 2008..A positive trial would have important implications for the 4000 colleges and universities in the United States. ..
- Evaluating the Impact of Simulated Team Training on Patient SafetyDaniel Scott; Fiscal Year: 2007..unreadable] DESCRIPTION (not provided by the applicant): [unreadable] [unreadable] [unreadable] [unreadable]..
- DYNAMIC PATTERNS IN COMPLEX BIOLOGICAL SYSTEMSJ A Scott Kelso; Fiscal Year: 2006..unreadable] [unreadable] [unreadable]..
- Kinetics of Human Homocysteine MetabolismGlen Duncan; Fiscal Year: 2004..g., exercise training and pharmacotherapy) on diabetes prevention and therapy. ..
- Force and Measurement Device - Phase IIRory Cooper; Fiscal Year: 2003..g. playgrounds, parks, etc.). ..
- Healthcare Team Approach to Tobacco CessationAlexander Prokhorov; Fiscal Year: 2005..Also, to encourage and facilitate health care provider outreach in the community. AIM 5: To evaluate the proposed tobacco cessation counseling strategies for their costs and benefits. ..
- Egocentric reference frames in memoryDavid Waller; Fiscal Year: 2005..Findings may also lead to ways of improving spatial abilities in the general population. ..
- PREVENTING ABUSE IN ADOLESCENT DATING RELATIONSHIPERNEST JOURILES; Fiscal Year: 2002..Assessment methods will include self-report, partner-report, and observational measures of behavior. ..
- EFFECTIVENESS OF COMPUTER-BASED TRAINING: CTRAINWYNDHAM ANGER; Fiscal Year: 2003..In addition, feedback will be elicited from content experts to evaluate the potential for adoption of the computer-based training program and the "screenbuilder" environment. ..
- Cognitive Psychology of Traumatic MemoryRichard McNally; Fiscal Year: 2004..g., fantasy proneness, imagery ability) that predict performance in these memory tasks is proposed. ..
- Virtuality Reality Cue Exposure for Crack CocaineBarbara Rothbaum; Fiscal Year: 2003..The long-term objectives to be achieved in Phase II include the development and testing of the treatment of crack cocaine dependence using VR cue exposure therapy in a controlled design. ..
- A New Measure of Nursing Home Care QualityMarilyn Rantz; Fiscal Year: 2003..abstract_text> ..
- THALAMIC NEURON DYNAMICS AND ABSENCE EPILEPSYWILLIAM LYTTON; Fiscal Year: 2002..Finally, we will assess the in vitro responses of interneurons and thalamocortical cells to protocols that mimic established models of absence epilepsy. ..
- CUTANEOUS CONTROL OF EXPLORATORY HAND MOVEMENTALLAN SMITH; Fiscal Year: 2001..Ultimately both the prehension and tactile exploration tasks have promise as diagnostic and therapeutic techniques to aid in rehabilitation medicine with stroke patients and patients with peripheral neuropathies. ..
- STRUCTURE AND PLASTICITY OF CENTRAL HEARING MECHANISMSCRAIG HENKEL; Fiscal Year: 2002..Results should lead to a better understanding of the influence of experience on the development of these binaural sensory pathways. ..
- CT-Bronchoscopy Workstation for Lung-Cancer AssessmentWilliam Higgins; Fiscal Year: 2006..These benefits reduce the need for follow-up procedures, reducing cost and gaining time toward successful treatment, or, stated differently, improve the early diagnosis, staging, and treatment of lung cancer. ..
- Topomer selection by chemists from All structuresRichard Cramer; Fiscal Year: 2006..abstract_text> ..
- EXERCISE ADVICE BY HUMAN OR COMPUTER--TESTING 2 THEORIESAbby King; Fiscal Year: 2002..Possible moderators and mediators of the response to intervention will be explored, as will costs associated with each intervention program. ..
- Advanced 3D Control Techniques for Powered WheelchairsRory Cooper; Fiscal Year: 2006..This pilot study will provide the means to conduct a large-scale trial designed to implement robust controllers in electric powered wheelchairs and test the effect on safety, mobility, and community participation. ..
- Expert Visual Guidance of Ultrasound for TelemedicineFlorence Sheehan; Fiscal Year: 2006..Specific Aim #4 is to make the guidance easily applicable to different organs. [unreadable] [unreadable]..
- COMPUTERIZED PAIN REPORT & NURSING PAIN CONSULT PROTOCODiana Wilkie; Fiscal Year: 2001..Study findings will be used to guide revisions of the tool and to plan organizational level implementation of this new technology as an interface with the electronic health care record. ..
- Domestic Violence and Child AggressionERNEST JOURILES; Fiscal Year: 2006..abstract_text> ..
- Influence of Lactation on Postpartum Stress and ImmunityMAUREEN EDITH GROER; Fiscal Year: 2010..The immunology and endocrinology of the postpartum provides a lens through which to study autoimmune disease, as the postpartum is a critical period for development or exacerbation of many autoimmune diseases. ..
- Prevention of Weight Gain in Young AdultsRena Wing; Fiscal Year: 2009..This approach shows promise for reducing weight gain and thereby improving long-term cardiovascular health. (End of Abstract) ..
- Tailored Teen Alcohol and Violence Prevention in the ERMaureen Walton; Fiscal Year: 2009....
- REVAMP Follow-up Study RenewalBarbara Rothbaum; Fiscal Year: 2008....
- Refining and Standardizing Health Literacy AssessmentElizabeth Hahn; Fiscal Year: 2007....
- PRIDE: Program to Reduce Incontinence by Diet & ExerciseRena Wing; Fiscal Year: 2007..If effective in womenwith incontinence, the methods and strategies of this innovative motivationally-focusedmaintenance intervention can beexamined n other obese populations. ..
- Long-Term Weight Loss MaintenanceRena Wing; Fiscal Year: 2007..Such information is important for providing an accurate picture to those individuals seeking to lose weight of what it takes to be a successful weight loss maintainer. ..
- Measuring Children's Activity in its Social ContextSANDRA HOFFERTH; Fiscal Year: 2005....
- Translational Research on Extinction and PTSDBarbara Rothbaum; Fiscal Year: 2005..Currently, no such interventions with proven efficacy exist. ..
- HEARING: DEVELOPMENT OF SYNAPTIC CIRCUITSCRAIG HENKEL; Fiscal Year: 2005....
- Retrograde amnesia after hippocampal damageRobert Sutherland; Fiscal Year: 2006..The results bear upon fundamental aspects of hippocampal dependent, long-term memory consolidation theories and will delineate a more precise role for the hippocampus formation in long-term memory. ..
- Datalogger Development for Wheelchair Mobility OutcomesDan Ding; Fiscal Year: 2005..abstract_text> ..
- Evaluation of Home Automated Telemanagement in COPDJoseph Finkelstein; Fiscal Year: 2008..Finally, we will perform cost-effectiveness analysis of the HAT intervention in the COPD patients. ..
- Hypertension Telemanagement in African AmericansJoseph Finkelstein; Fiscal Year: 2008..Finally, we will perform cost-effectiveness analysis of the HAT intervention in the African American patients with hypertension. ..
- SINGLE CHANNEL HYBRID FES GAIT SYSTEMWilliam Durfee; Fiscal Year: 2008..The proposed approach for FES-aided gait is new and may provide choices for a wider pool of people with SCI than current solutions. [unreadable] [unreadable]..
- PARASPINAL MUSCLE DENERVATION AND SYMPTOMS IN LUMBAR SSAndrew Haig; Fiscal Year: 2005..Subjects will repeat the test battery (MRI, EMG, and clinical evaluation) approximately 18 months later. Appropriate statistics will test each of the four hypotheses. ..
- DRIVING SIMULATOR FOR PERSONS WITH IMPAIRED COGNITIONWilliam Durfee; Fiscal Year: 2004..At the end of Phase II, the applicant company (STI) will be prepared to move into a commercialization phase to bring the STISIM simulator into the rehabilitation market. ..