Alias: Caenorhabditis remanei (Sudhaus, 1974), Caenorhabditis vulgarensis, Caenorhabditis vulgariensis, Caenorhabditis vulgaris, Caenorhabditis vulgaris Baird, Fitch & Emmons, 1994
- Rapamycin additively extends lifespan in short- and long-lived lines of the nematode Caenorhabditis remaneiMartin I Lind
Ageing Research Group, Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, 752 36 Uppsala, Sweden Electronic address
Exp Gerontol . 2017..We expose short- and long-lived lines of the nematode Caenorhabditis remanei to rapamycin, and investigate if long-lived lines, which are hypothesized to already have down-regulated ..
- Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccationCihan Erkut
Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
PLoS ONE 8:e82473. 2013..Remarkably, this response is specific and involves a small number of functional pathways, which represent the generic toolkit for anhydrobiosis in plants and animals. ..
- Pinewood nematode-associated bacteria contribute to oxidative stress resistance of Bursaphelenchus xylophilusCláudia S L Vicente
Department of Environmental Biology, College of Bioscience and Biotechnology, Chubu University, 1200 Matsumoto, Kasugai, Aichi 487 8501, Japan
BMC Microbiol 13:299. 2013....
- Identification of C. elegans & C. briggsae miRNAs by modified miRsearchAvirup Dutta
Molecular and Human Genetics Division, CSIR Indian Institute of Chemical Biology, 4, Raja S C Mullick Road, Kolkata 700 032, India
Front Biosci (Landmark Ed) 19:504-14. 2014..All the mature miRNA sequences of Caenorhabditis elegans, Caenorhabditis briggsae, Caenorhabditis remanei, Drosophila melanogaster, Homo sapiens and Rattus norvegicus available in miRbase was searched by this ..
- Nematode-derived drosomycin-type antifungal peptides provide evidence for plant-to-ecdysozoan horizontal transfer of a disease resistance geneShunyi Zhu
Group of Animal Innate Immunity, State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing 100101, China
Nat Commun 5:3154. 2014..family of DTAFPs, comprising of 15 members (termed cremycin-1 to crymycin-15), in the fruit nematode Caenorhabditis remanei. Cremycins share highly similar amino-acid sequences and identical precursor organization to drosomycins...
- A recent global selective sweep on the age-1 phosphatidylinositol 3-OH kinase regulator of the insulin-like signaling pathway within Caenorhabditis remaneiRichard Jovelin
Institute of Ecology and Evolution, University of Oregon, Oregon 97403 Department of Ecology and Evolutionary Biology, University of Toronto, Ontario M5S 3B2, Canada
G3 (Bethesda) 4:1123-33. 2014..level, we examine population genetic variation in the insulin-like signaling pathway of the nematode Caenorhabditis remanei. We document a recent global selective sweep on the phosphoinositide-3-kinase pathway regulator, age-1, ..
- Rapid evolution of phenotypic plasticity and shifting thresholds of genetic assimilation in the nematode Caenorhabditis remaneiKristin L Sikkink
Institute of Ecology and Evolution, University of Oregon, Eugene, Oregon 97403 5289
G3 (Bethesda) 4:1103-12. 2014..We experimentally evolved outbred populations of the nematode Caenorhabditis remanei under an acute heat shock during early larval development...
- Gonad morphogenesis defects drive hybrid male sterility in asymmetric hybrid breakdown of Caenorhabditis nematodesAlivia Dey
Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada, M5S 3B2
Evol Dev 16:362-72. 2014..model for studying speciation, and here we investigate the nature and causes of hybrid breakdown between Caenorhabditis remanei and C. latens...
- The transgenerational effects of heat stress in the nematode Caenorhabditis remanei are negative and rapidly eliminated under direct selection for increased stress resistance in larvaeKristin L Sikkink
Institute of Ecology and Evolution, University of Oregon, Eugene, OR 97403 5289, USA
Genomics 104:438-46. 2014..existence of anticipatory parental effects in the heat stress response in the highly polymorphic nematode Caenorhabditis remanei. Rather providing an anticipatory response, parents subject to a prior heat stress actually produce ..
- Condition dependence of male mortality drives the evolution of sex differences in longevityHwei Yen Chen
Ageing Research Group, Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, 752 36 Uppsala, Sweden
Curr Biol 24:2423-7. 2014..Experimental evolution in an obligately sexual roundworm, Caenorhabditis remanei, in which males live longer than females, reveals that sexual dimorphism in longevity erodes rapidly when ..
- Female, but not male, nematodes evolve under experimental sexual coevolutionK Fritzsche
Department of Animal Evolutionary Ecology, Institute for Evolution and Ecology, University of Tubingen, Auf der Morgenstelle 28, 72076 Tubingen, Germany
Proc Biol Sci 281:20140942. 2014..Using the gonochoristic nematode Caenorhabditis remanei, we now show that 20 generations of relaxed versus increased sexual selection pressure lead to female, but ..
- Microevolution of nematode miRNAs reveals diverse modes of selectionRichard Jovelin
Department of Ecology and Evolutionary Biology, University of Toronto, Ontario, Canada
Genome Biol Evol 6:3049-63. 2014..Here, we quantify nucleotide variability for 129 miRNAs in the genome of the nematode Caenorhabditis remanei to understand the microevolution of this important class of regulatory genes...
- The outer kinetochore protein KNL-1 contains a defined oligomerization domain in nematodesDavid M Kern
Whitehead Institute for Biomedical Research, Cambridge, MA 02142 Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139
Mol Biol Cell 26:229-37. 2015..An N-terminal KNL-1 domain from both C. elegans and the related nematode Caenorhabditis remanei oligomerizes into a decameric assembly that appears roughly circular when visualized by electron ..
- Environmentally induced changes in correlated responses to selection reveal variable pleiotropy across a complex genetic networkKristin L Sikkink
Institute of Ecology and Evolution, University of Oregon, Eugene, Oregon, 97403
Evolution 69:1128-42. 2015..We describe a factorial selection experiment using the nematode Caenorhabditis remanei in which two different stress-related phenotypes (heat and oxidative stress resistance) were selected ..
- Identification of lipid droplet structure-like/resident proteins in Caenorhabditis elegansHuimin Na
National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China University of Chinese Academy of Sciences, Beijing 100049, China
Biochim Biophys Acta 1853:2481-91. 2015..Together, these two LD structure-like/resident proteins provide a basis for future mechanistic studies into the dynamics and functions of LDs in C. elegans. ..
- Sex-specific Tradeoffs With Growth and Fitness Following Life-span Extension by Rapamycin in an Outcrossing Nematode, Caenorhabditis remaneiMartin I Lind
Ageing Research Group, Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, Sweden
J Gerontol A Biol Sci Med Sci 71:882-90. 2016..rapamycin treatment on growth, reproduction, life span, and individual fitness in the outcrossing nematode Caenorhabditis remanei Life-long exposure to rapamycin always resulted in the strongest response, whereas postreproductive ..
- Experimental evolution: Assortative mating and sexual selection, independent of local adaptation, lead to reproductive isolation in the nematode Caenorhabditis remaneiDean M Castillo
Department of Biology, Indiana University, 1001 East Third Street, Bloomington, Indiana, 47405
Evolution 69:3141-55. 2015..ecological divergence, sexual selection, and genetic drift to the evolution of reproductive isolation in Caenorhabditis remanei. The nematodes were reared on two different environments for 100 generations...
- Selection on learning performance results in the correlated evolution of sexual dimorphism in life historyMartyna K Zwoinska
Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden
Evolution 70:342-57. 2016..To investigate if IaSC constraints sex-specific evolution of learning, we selected Caenorhabditis remanei nematode females for increased or decreased olfactory learning performance and measured learning, life ..
- Evolution of male age-specific reproduction under differential risks and causes of death: males pay the cost of high female fitnessH Y Chen
Ageing Research Group, Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden
J Evol Biol 29:848-56. 2016..long-life, decelerated late-life mortality in both sexes and increased female fecundity in the nematode, Caenorhabditis remanei. Here, we used these cryopreserved lines to show that males evolving under heat shock suffered from ..
- Caenorhabditis microbiota: worm guts get populatedLaura C Clark
Department of Biochemistry, University of Oxford, South Parks Road, Oxford, OX1 3QU, UK
BMC Biol 14:37. 2016..elegans and the related taxa Caenorhabditis briggsae and Caenorhabditis remanei In contrast to the monoxenic, microbiota-free cultures that are studied in hundreds of laboratories, it ..
- Evolution of drug-tolerant nematode populations in response to density reductionAlan Reynolds
Institute of Biodiversity, Animal Health and Comparative Medicine College of Medical, Veterinary and Life Sciences University of Glasgow Glasgow UK
Evol Appl 9:726-38. 2016..We experimentally created replicate selection lines of free-living Caenorhabditis remanei exposed to Ivermectin at high and low doses to assess whether survivorship of lines selected in drug-..
- Functional constraint and divergence in the G protein family in Caenorhabditis elegans and Caenorhabditis briggsaeRichard Jovelin
Center for Ecology and Evolutionary Biology, University of Oregon, Eugene, OR, 97403 5289, USA
Mol Genet Genomics 273:299-310. 2005..The presence of this motif in the same intron in the gpa-1 genes of C. elegans, C. briggsae and Caenorhabditis remanei suggests that it plays a role in the regulation of gpa-1, as well as other loci.
- Sex differences in cognitive ageing: testing predictions derived from life-history theory in a dioecious nematodeMartyna K Zwoinska
Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, Norbyvagen 18 D, 752 36 Uppsala, Sweden Electronic address
Exp Gerontol 48:1469-72. 2013..We used an established associative learning paradigm in the dioecious nematode Caenorhabditis remanei, which is sexually dimorphic for lifespan, to study age-related learning ability in males and females...
- Why ageing stops: heterogeneity explains late-life mortality deceleration in nematodesHwei Yen Chen
Ageing Research Group, Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, Uppsala, Norbyvägen 18D 75236, Sweden
Biol Lett 9:20130217. 2013..and mortality source (random death or condition-dependent) to create replicate populations of nematodes, Caenorhabditis remanei that differ in the strength of selection in late-life and in the level of lifelong robustness...
- Cloning and expression analysis of pos-1 in the nematodes Caenorhabditis briggsae and Caenorhabditis remaneiJamie Konwerski
Department of Biology, Central Michigan University, Mount Pleasant, Michigan 48859, USA
Dev Dyn 233:1006-12. 2005..We conclude that pos-1 appears to be translationally regulated in C. briggsae as it is in C. elegans and speculate the conserved 3' UTR sequences may be involved...
- Selective conservation of the RSL-encoding, proteinase inhibitory-type, clade L serpins in Caenorhabditis speciesCliff J Luke
Magee Womens Research Institute, Children s Hospital of Pittsburgh, Department of Pediatrics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA
Front Biosci 11:581-94. 2006..we failed to detect non-RSL encoding serpin orthologues in the genomes of Caenorhabditis briggsae and Caenorhabditis remanei. These data suggested that unlike their RSL-encoding paralogues, the relatively high percentage of non-RSL ..
- A comparative study of sperm morphology, cytology and activation in Caenorhabditis elegans, Caenorhabditis remanei and Caenorhabditis briggsaeBrian Geldziler
Department of Genetics, Waksman Institute, Rutgers University, Piscataway, NJ 08854, USA
Dev Genes Evol 216:198-208. 2006..The genome sequences of C. elegans, Caenorhabditis briggsae and Caenorhabditis remanei allow for informative comparative studies among these three species...
- Conspecific and interspecific interactions between the FEM-2 and the FEM-3 sex-determining proteins despite rapid sequence divergencePaul Stothard
Department of Biological Sciences, University of Alberta, Edmonton, Canada
J Mol Evol 62:281-91. 2006Using degenerate oligonucleotide primers, we isolated the Caenorhabditis remanei orthologue of the C. elegans sex-determining phosphatase gene fem-2 as well as two other protein phosphatase homologues...
- Comparative genomics in C. elegans, C. briggsae, and other Caenorhabditis speciesAvril Coghlan
Conway Institute of Biomolecular and Biomedical Research, University College Dublin, Belfield, Ireland
Methods Mol Biol 351:13-29. 2006..elegans and C. briggsae genomes to those of Caenorhabditis remanei, C. n. sp...
- Global population genetic structure of Caenorhabditis remanei reveals incipient speciationAlivia Dey
Department of Ecology and Evolutionary Biology, Centre for the Analysis of Genome Evolution and Function, University of Toronto, Toronto, Ontario, Canada
Genetics 191:1257-69. 2012..survey nucleotide polymorphism across the X chromosome for three populations of the outcrossing nematode Caenorhabditis remanei and demonstrate its divergence from a fourth population describing a closely related new species from ..
- Germ cell survival in C. elegans and C. remanei is affected when the DEAD box RNA helicases VBH-1 or Cre-VBH-1 are silencedLaura S Salinas
Departamento de Biología Celular y Desarrollo, Instituto de Fisiologia Celular, Universidad Nacional Autonoma de Mexico, Circuito exterior s n Ciudad Universitaria, Mexico DF, 04510, Mexico
Genesis 50:801-18. 2012..We decided to extend our previous work in C. elegans to sibling species Caenorhabditis remanei to understand what is the function of the VBH-1 homolog in this gonochoristic species...
- Longer life span evolves under high rates of condition-dependent mortalityHwei Yen Chen
Ageing Research Group, Department of Animal Ecology, Evolutionary Biology Centre, Uppsala University, Norbyvagen 18D, 752 36 Uppsala, Sweden
Curr Biol 22:2140-3. 2012..We employed an experimental evolution design, using a nematode, Caenorhabditis remanei, that allowed us to disentangle the effects of mortality rate (high versus low) and mortality source (..
- Fine-scale signatures of molecular evolution reconcile models of indel-associated mutationRichard Jovelin
Department of Ecology and Evolutionary Biology, University of Toronto, Ontario, Canada
Genome Biol Evol 5:978-86. 2013..vicinity of indels, with a resolution of tens of base pairs, for the two closely related nematode species Caenorhabditis remanei and C. sp. 23...
- A Microbial Metagenome (Leucobacter sp.) in Caenorhabditis Whole Genome SequencesRiccardo Percudani
Department of Biosciences, Laboratory of Biochemistry and Molecular Biology, University of Parma, Parma, Italy
Bioinform Biol Insights 7:55-72. 2013DNA of apparently recent bacterial origin is found in the genomic sequences of Caenorhabditis angaria and Caenorhabditis remanei. Here we present evidence that the DNA belongs to a single species of the genus Leucobacter (high-GC Gram+ ..
- Natural variation for lifespan and stress response in the nematode Caenorhabditis remaneiRose M Reynolds
Institute of Ecology and Evolution, University of Oregon, Eugene, Oregon, USA
PLoS ONE 8:e58212. 2013....
- Widespread evolutionary conservation of alternatively spliced exons in CaenorhabditisManuel Irimia
Departament de Genetica, Universitat de Barcelona, Barcelona, Spain
Mol Biol Evol 25:375-82. 2008..than 92% of cassette exons from Caenorhabditis elegans are conserved in Caenorhabditis briggsae and/or Caenorhabditis remanei. High levels of conservation extend to minor-form exons (present in a minority of transcripts) and are ..
- Sexual selection and maintenance of sex: evidence from comparisons of rates of genomic accumulation of mutations and divergence of sex-related genes in sexual and hermaphroditic species of CaenorhabditisCarlo G Artieri
Department of Biology, McMaster University, Hamilton, Ontario, Canada
Mol Biol Evol 25:972-9. 2008..rate of accumulation of deleterious mutations using a large number of orthologs (11,493) in the dioecious Caenorhabditis remanei and the hermaphroditic Caenorhabditis briggsae...
- The species, sex, and stage specificity of a Caenorhabditis sex pheromoneJ R Chasnov
Department of Mathematics and Biology, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
Proc Natl Acad Sci U S A 104:6730-5. 2007..elegans and Caenorhabditis briggsae with males and self-fertilizing hermaphrodites and dioecy in Caenorhabditis remanei and Caenorhabditis sp. strain CB5161 with males and females...
- Conservation of large foci formation in arrested oocytes of Caenorhabditis nematodesMolly Jud
Department of Biology, Central Michigan University, Mount Pleasant, MI 48859, USA
Dev Genes Evol 217:221-6. 2007..In this paper, we examine four gonochoristic rhabditid species: Caenorhabditis remanei, Caenorhabditis sp. CB5161, Caenorhabditis sp. PS1010, and Rhabditella axei DF5006...
- WormBase: new content and better accessTamberlyn Bieri
Genome Sequencing Center, Washington University School of Medicine, St Louis, MO 63108, USA
Nucleic Acids Res 35:D506-10. 2007..functional genomics; expanded the annotation of closely related nematodes with a new genome browser for Caenorhabditis remanei; and deployed new hardware for stronger performance...
- Selection intensity on preferred codons correlates with overall codon usage bias in Caenorhabditis remaneiAsher D Cutter
Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3JT, United Kingdom
Curr Biol 16:2053-7. 2006..Here, we quantify the magnitude of selection acting on alternative codons in genes of the nematode Caenorhabditis remanei, an outcrossing relative of the model organism C...
- High nucleotide polymorphism and rapid decay of linkage disequilibrium in wild populations of Caenorhabditis remaneiAsher D Cutter
Institute of Evolutionary Biology, University of Edinburgh, United Kingdom
Genetics 174:901-13. 2006..This will be especially important if self-fertilization evolved recently in C. elegans history, because most of the evolutionary time separating C. elegans from its known relatives would have occurred in a state of obligate outcrossing...
- Intraspecific variation in fem-3 and tra-2, two rapidly coevolving nematode sex-determining genesEric S Haag
Department of Biology, University of Maryland, College Park, MD 20742, USA
Gene 349:35-42. 2005..the domain of TRA-2 that binds it, we have examined intraspecific variation in the gonochoristic species Caenorhabditis remanei. Ten new complete Cr-fem-3 alleles from three regions of the United States are described...
- Dietary restriction by bacterial deprivation increases life span in wild-derived nematodesGeorge L Sutphin
Department of Pathology, University of Washington, Seattle, WA 98195 7470, USA
Exp Gerontol 43:130-5. 2008..span in five different wild-derived Caenorhabditis elegans strains and two strains of the related species Caenorhabditis remanei. Longevity was enhanced in each of the wild-derived C...
- Evolutionary dynamics of nematode operons: easy come, slow goWenfeng Qian
Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan 48109, USA
Genome Res 18:412-21. 2008..elegans operons in Caenorhabditis briggsae, Caenorhabditis remanei, and Caenorhabditis brenneri, using Pristionchus pacificus and Brugia malayi as outgroups, and identified ..
- Multilocus patterns of polymorphism and selection across the X chromosome of Caenorhabditis remaneiAsher D Cutter
Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario M5S 3G5, Canada
Genetics 178:1661-72. 2008..To address this issue in the nematode Caenorhabditis remanei, I sampled nucleotide polymorphism at 40 loci across the X chromosome...
- PKN-1, a homologue of mammalian PKN, is involved in the regulation of muscle contraction and force transmission in C. elegansHiroshi Qadota
Division of Signal Transduction, Graduate School of Biological Sciences, Nara Institute of Science and Technology, Ikoma, Nara, Japan
J Mol Biol 407:222-31. 2011..The genomic deletion of pkn-1 also showed a defect in force transmission. These results suggest that PKN-1 functions as a regulator of muscle contraction-relaxation and as a component of the force transmission mechanism...
- Neuropeptide-like protein diversity in phylum NematodaPaul McVeigh
Biomolecular Processes Parasitology, School of Biological Sciences, Medical Biology Centre, 97 Lisburn Road, Queen s University Belfast, Belfast BT9 7BL, UK
Int J Parasitol 38:1493-503. 2008..elegans, while the sole EST representative of nlp-23 was from Caenorhabditis remanei. Several ESTs encoding putative antibacterial peptides similar to those encoded by the C...
- Controlling population evolution in the laboratory to evaluate methods of historical inferencePatrick Mardulyn
Laboratory of Evolutionary Genetics, Universite Libre de Bruxelles, Gosselies, Belgium
PLoS ONE 3:e2960. 2008..microsatellite data sets from laboratory-cultured populations of a gonochoric free-living nematode, Caenorhabditis remanei, that were constrained to pre-defined demographic histories featuring different levels of migration among ..
- Population frequencies of transposable elements in selfing and outcrossing Caenorhabditis nematodesElie S Dolgin
Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, King s Buildings, Edinburgh, UK
Genet Res (Camb) 90:317-29. 2008..natural populations of the self-fertilizing nematode Caenorhabditis elegans and its outcrossing relative Caenorhabditis remanei. We identified a Tc1-like class of elements in the C...
- Basic Demography of Caenorhabditis remanei Cultured under Standard Laboratory ConditionsS Anaid Diaz
Division of Environmental and Evolutionary Biology, Faculty of Biomedical and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
J Nematol 40:167-78. 2008..Finally, comparisons between species suggest that, despite the differences in reproductive strategies (i.e., sex ratios, lifetime fecundity), C. remanei has developmental time similar to the hermaphroditic N2 strain of C. elegans...
- Rapid sequence evolution of transcription factors controlling neuron differentiation in CaenorhabditisRichard Jovelin
Center for Ecology and Evolutionary Biology, University of Oregon, Oregon, USA
Mol Biol Evol 26:2373-86. 2009..Allelic variation was then sampled for 28 of these genes within a population of the related species Caenorhabditis remanei. Neuronal TFs are more divergent, both within and between species, than structural genes...
- Phenotypic covariance of longevity, immunity and stress resistance in the caenorhabditis nematodesFrancis R G Amrit
School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, Birmingham, West Midlands, United Kingdom
PLoS ONE 5:e9978. 2010..Here we investigate this phenotypic covariance by comparing longevity, stress resistance and immunity in four Caenorhabditis species...
- The function of copulatory plugs in Caenorhabditis remanei: hints for female benefitsNadine Timmermeyer
Department of Animal Evolutionary Ecology, Institute for Evolution and Ecology, University of Tuebingen, Auf der Morgenstelle 28, 72076 Tuebingen, Germany
Front Zool 7:28. 2010..Here, we studied these consequences in the gonochoristic nematode Caenorhabditis remanei. We employed a new CO2-sedation technique to interrupt matings before or after the production of a plug...
- A bias caused by ectopic development produces sexually dimorphic sperm in nematodesChristopher Baldi
Graduate School of Biomedical Sciences, The UMDNJ School of Osteopathic Medicine, B303 Science Center, 2 Medical Center Drive, Stratford, NJ 08084, USA
Curr Biol 21:1416-20. 2011..When we transformed females of the species Caenorhabditis remanei into hermaphrodites , their sperm were significantly smaller than those of males...
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