Xing Xu

Summary

Affiliation: Washington University School of Medicine
Country: USA

Publications

  1. ncbi request reprint RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment
    Xing Xu
    Department of Genetics, Washington University, School of Medicine, St Louis, MO 63110, USA
    Bioinformatics 23:1883-91. 2007
  2. pmc Discovering cis-regulatory RNAs in Shewanella genomes by Support Vector Machines
    Xing Xu
    Department of Genetics, Washington University School of Medicine, St Louis, Missouri, United States of America
    PLoS Comput Biol 5:e1000338. 2009
  3. ncbi request reprint A graph theoretical approach for predicting common RNA secondary structure motifs including pseudoknots in unaligned sequences
    Yongmei Ji
    Department of Genetics, Washington University, School of Medicine, St Louis, MO 63110, USA
    Bioinformatics 20:1591-602. 2004
  4. pmc The cis-regulatory map of Shewanella genomes
    Jiajian Liu
    Department of Genetics, Washington University School of Medicine, 660 S Euclid, Box 8232, St Louis, MO 63110, USA
    Nucleic Acids Res 36:5376-90. 2008
  5. ncbi request reprint Shape optimization of plate with static and dynamic constraints via virtual laminated element
    Fang Li
    Department of Civil Engineering, Zhejiang University, Hangzhou 310027, China
    J Zhejiang Univ Sci 4:202-6. 2003

Collaborators

Detail Information

Publications5

  1. ncbi request reprint RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment
    Xing Xu
    Department of Genetics, Washington University, School of Medicine, St Louis, MO 63110, USA
    Bioinformatics 23:1883-91. 2007
    ..Predicting common RNA secondary structures in multiple unaligned sequences remains a challenge in bioinformatics research...
  2. pmc Discovering cis-regulatory RNAs in Shewanella genomes by Support Vector Machines
    Xing Xu
    Department of Genetics, Washington University School of Medicine, St Louis, Missouri, United States of America
    PLoS Comput Biol 5:e1000338. 2009
    ..The RSSVM software, predictions, and analysis results on Shewanella genomes are available at http://ural.wustl.edu/resources.html#RSSVM...
  3. ncbi request reprint A graph theoretical approach for predicting common RNA secondary structure motifs including pseudoknots in unaligned sequences
    Yongmei Ji
    Department of Genetics, Washington University, School of Medicine, St Louis, MO 63110, USA
    Bioinformatics 20:1591-602. 2004
    ..However, identification of novel RNA regulatory motifs using computational methods has not been widely explored. Effective tools for predicting novel RNA regulatory motifs based on genomic sequences are needed...
  4. pmc The cis-regulatory map of Shewanella genomes
    Jiajian Liu
    Department of Genetics, Washington University School of Medicine, 660 S Euclid, Box 8232, St Louis, MO 63110, USA
    Nucleic Acids Res 36:5376-90. 2008
    ....
  5. ncbi request reprint Shape optimization of plate with static and dynamic constraints via virtual laminated element
    Fang Li
    Department of Civil Engineering, Zhejiang University, Hangzhou 310027, China
    J Zhejiang Univ Sci 4:202-6. 2003
    ..Some typical examples are offered to prove the effectiveness and practicality of the proposed method...