- The Sequence Ontology: a tool for the unification of genome annotationsKaren Eilbeck
Department of Molecular and Cellular Biology, Life Sciences Addition, University of California, Berkeley, CA 94729 3200, USA
Genome Biol 6:R44. 2005....
- Sequence ontology annotation guideKaren Eilbeck
Department of Molecular and Cellular Biology, Life Sciences Addition, University of California, Berkeley, California 94729 3200, USA
Comp Funct Genomics 5:642-7. 2004..First we show where the terms needed to describe the gene's features are located in SO and their relationships to one another. We then show line by line how to format the file to construct a SO compliant annotation of this gene...
- Evolution of the Sequence Ontology terms and relationshipsChristopher J Mungall
Lawrence Berkeley National Laboratory, Mail Stop 64R0121, Berkeley, CA 94720, USA
J Biomed Inform 44:87-93. 2011..Here, we report changes and improvements made to SO including new relationships to better define the mereological, spatial and temporal aspects of biological sequence...
- The OBO Foundry: coordinated evolution of ontologies to support biomedical data integrationBarry Smith
Department of Philosophy and New York State Center of Excellence in Bioinformatics and Life Sciences, University at Buffalo, Buffalo, New York 14203, USA
Nat Biotechnol 25:1251-5. 2007..We describe this OBO Foundry initiative and provide guidelines for those who might wish to become involved...