Elena Zotenko

Summary

Affiliation: National Institutes of Health
Country: USA

Publications

  1. pmc Secondary structure spatial conformation footprint: a novel method for fast protein structure comparison and classification
    Elena Zotenko
    Department of Computer Science, University of Maryland, College Park, MD 20742, USA
    BMC Struct Biol 6:12. 2006
  2. pmc Predicting domain-domain interactions using a parsimony approach
    Katia S Guimarães
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    Genome Biol 7:R104. 2006
  3. pmc Structural footprinting in protein structure comparison: the impact of structural fragments
    Elena Zotenko
    Department of Computer Science, University of Maryland, College Park, MD 20742, USA
    BMC Struct Biol 7:53. 2007
  4. pmc COCO-CL: hierarchical clustering of homology relations based on evolutionary correlations
    Raja Jothi
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    Bioinformatics 22:779-88. 2006

Detail Information

Publications5

  1. pmc Secondary structure spatial conformation footprint: a novel method for fast protein structure comparison and classification
    Elena Zotenko
    Department of Computer Science, University of Maryland, College Park, MD 20742, USA
    BMC Struct Biol 6:12. 2006
    ....
  2. pmc Predicting domain-domain interactions using a parsimony approach
    Katia S Guimarães
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    Genome Biol 7:R104. 2006
    ..This method outperforms previous approaches by a considerable margin. The results indicate that the parsimony principle provides a correct approach for detecting domain-domain contacts...
  3. pmc Structural footprinting in protein structure comparison: the impact of structural fragments
    Elena Zotenko
    Department of Computer Science, University of Maryland, College Park, MD 20742, USA
    BMC Struct Biol 7:53. 2007
    ..How do these choices affect the ability of the method to detect various types of structural similarity?..
  4. pmc COCO-CL: hierarchical clustering of homology relations based on evolutionary correlations
    Raja Jothi
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    Bioinformatics 22:779-88. 2006
    ..These methods do not attempt to preserve the non-transitivity and hierarchic nature of the orthology relation...