T A Tatusova

Summary

Affiliation: National Institutes of Health
Country: USA

Publications

  1. doi request reprint Update on Genomic Databases and Resources at the National Center for Biotechnology Information
    Tatiana Tatusova
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD, 20894, USA
    Methods Mol Biol 1415:3-30. 2016
  2. pmc Update on RefSeq microbial genomes resources
    Tatiana Tatusova
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A 8600 Rockville Pike, Bethesda, MD 20894, USA
    Nucleic Acids Res 43:D599-605. 2015
  3. pmc RefSeq microbial genomes database: new representation and annotation strategy
    Tatiana Tatusova
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bldg 38A 8600 Rockville Pike, Bethesda, MD 20894, USA
    Nucleic Acids Res 42:D553-9. 2014
  4. pmc FLAN: a web server for influenza virus genome annotation
    Yiming Bao
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    Nucleic Acids Res 35:W280-4. 2007
  5. pmc Splign: algorithms for computing spliced alignments with identification of paralogs
    Yuri Kapustin
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20814, USA
    Biol Direct 3:20. 2008
  6. pmc Virus variation resources at the National Center for Biotechnology Information: dengue virus
    Wolfgang Resch
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA
    BMC Microbiol 9:65. 2009
  7. pmc The relationship of protein conservation and sequence length
    David J Lipman
    National Center for Biotechnology Information, National Institutes of Health, Bethesda, MD 20894, USA
    BMC Evol Biol 2:20. 2002
  8. pmc Visualization of large influenza virus sequence datasets using adaptively aggregated trees with sampling-based subscale representation
    Leonid Zaslavsky
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    BMC Bioinformatics 9:237. 2008
  9. ncbi request reprint Complete genomes in WWW Entrez: data representation and analysis
    T A Tatusova
    National Center for Biotechnology Information NCBI, National Library of Medicine, National Institutes of Health, Bethesda, MD 208944, USA
    Bioinformatics 15:536-43. 1999
  10. ncbi request reprint BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences
    T A Tatusova
    National Center for Biotechnology Information NCBI, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    FEMS Microbiol Lett 174:247-50. 1999

Collaborators

Detail Information

Publications11

  1. doi request reprint Update on Genomic Databases and Resources at the National Center for Biotechnology Information
    Tatiana Tatusova
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD, 20894, USA
    Methods Mol Biol 1415:3-30. 2016
    ..New strategies have been designed to bring an order to this genome sequence shockwave and improve the usability of associated data. ..
  2. pmc Update on RefSeq microbial genomes resources
    Tatiana Tatusova
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A 8600 Rockville Pike, Bethesda, MD 20894, USA
    Nucleic Acids Res 43:D599-605. 2015
    ..Several new features have been added to RefSeq prokaryotic genomes data processing pipeline including the calculation of genome groups (clades) and the optimization of protein clusters generation using pan-genome approach...
  3. pmc RefSeq microbial genomes database: new representation and annotation strategy
    Tatiana Tatusova
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bldg 38A 8600 Rockville Pike, Bethesda, MD 20894, USA
    Nucleic Acids Res 42:D553-9. 2014
    ..New strategies have been developed for the annotation and representation of reference genomes and sequence variations derived from population studies and clinical outbreaks. ..
  4. pmc FLAN: a web server for influenza virus genome annotation
    Yiming Bao
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    Nucleic Acids Res 35:W280-4. 2007
    ..A message showing the length of the input sequence, the predicted virus type, segment and subtype for the hemagglutinin and neuraminidase segments of Influenza A virus will also be displayed...
  5. pmc Splign: algorithms for computing spliced alignments with identification of paralogs
    Yuri Kapustin
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20814, USA
    Biol Direct 3:20. 2008
    ..Several factors such as presence of paralogs, small exons, non-consensus splice signals, sequencing errors and polymorphic sites pose recognized difficulties to existing spliced alignment algorithms...
  6. pmc Virus variation resources at the National Center for Biotechnology Information: dengue virus
    Wolfgang Resch
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA
    BMC Microbiol 9:65. 2009
    ..Thus far, there has not been a comprehensive database for dengue virus, a significant public health threat...
  7. pmc The relationship of protein conservation and sequence length
    David J Lipman
    National Center for Biotechnology Information, National Institutes of Health, Bethesda, MD 20894, USA
    BMC Evol Biol 2:20. 2002
    ..However, additional evolutionary forces that affect the length of a protein may be revealed by studying the length distributions of proteins evolving under weaker functional constraints...
  8. pmc Visualization of large influenza virus sequence datasets using adaptively aggregated trees with sampling-based subscale representation
    Leonid Zaslavsky
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    BMC Bioinformatics 9:237. 2008
    ..Enhanced visualization tools are required to represent results of the exploratory analysis on the web in an easy-to-comprehend form and to facilitate convenient information retrieval...
  9. ncbi request reprint Complete genomes in WWW Entrez: data representation and analysis
    T A Tatusova
    National Center for Biotechnology Information NCBI, National Library of Medicine, National Institutes of Health, Bethesda, MD 208944, USA
    Bioinformatics 15:536-43. 1999
    ....
  10. ncbi request reprint BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences
    T A Tatusova
    National Center for Biotechnology Information NCBI, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA
    FEMS Microbiol Lett 174:247-50. 1999
    ..html). The resulting alignments are presented in both graphical and text form. The variants of the program for PC (Windows), Mac and several UNIX-based platforms can be downloaded from the NCBI FTP site (ftp://ncbi.nlm.nih.gov)...
  11. pmc Database resources of the National Center for Biotechnology Information
    D L Wheeler
    National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA
    Nucleic Acids Res 29:11-6. 2001
    ..Augmenting many of the Web applications are custom implementations of the BLAST program optimized to search specialized data sets. All of the resources can be accessed through the NCBI home page at: http://www.ncbi.nlm.nih. gov...