Stanley J F Laulederkind

Summary

Affiliation: Medical College of Wisconsin
Country: USA

Publications

  1. pmc The Rat Genome Database 2013--data, tools and users
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, WI 53226 3548, USA
    Brief Bioinform 14:520-6. 2013
  2. pmc PhenoMiner: quantitative phenotype curation at the rat genome database
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, Human and Molecular Genetics Center, 8701 Watertown Plank Rd, Milwaukee, WI 53226 3548, USA
    Database (Oxford) 2013:bat015. 2013
  3. pmc Ontology searching and browsing at the Rat Genome Database
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226 3548, USA
    Database (Oxford) 2012:bas016. 2012
  4. pmc The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, WI 53226 3548, USA
    Database (Oxford) 2011:bar002. 2011
  5. pmc The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database
    G Thomas Hayman
    Medical College of Wisconsin, Human and Molecular Genetics Center Department of Surgery, Medical College of Wisconsin, Milwaukee, WI, USA
    Database (Oxford) 2016:. 2016
  6. pmc Rat Genome Database: a unique resource for rat, human, and mouse quantitative trait locus data
    Rajni Nigam
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin
    Physiol Genomics 45:809-16. 2013
  7. pmc Exploring genetic, genomic, and phenotypic data at the rat genome database
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin, USA
    Curr Protoc Bioinformatics . 2012
  8. pmc The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease
    Mary Shimoyama
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA Department of Surgery, Medical College of Wisconsin, Milwaukee, WI 53226, USA
    Nucleic Acids Res 43:D743-50. 2015
  9. pmc Analysis of disease-associated objects at the Rat Genome Database
    Shur Jen Wang
    Rat Genome Database, Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI 53226, USA
    Database (Oxford) 2013:bat046. 2013
  10. pmc PhenoMiner: a quantitative phenotype database for the laboratory rat, Rattus norvegicus. Application in hypertension and renal disease
    Shur Jen Wang
    Human and Molecular Genetics Center, Medical College of Wisconsin, Department of Physiology, Medical College of Wisconsin and Department of Surgery, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI53226, USA
    Database (Oxford) 2015:. 2015

Collaborators

Detail Information

Publications12

  1. pmc The Rat Genome Database 2013--data, tools and users
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, WI 53226 3548, USA
    Brief Bioinform 14:520-6. 2013
    ..The value of RGD continues to grow as more types of data and more tools are added, while reaching more types of end users. ..
  2. pmc PhenoMiner: quantitative phenotype curation at the rat genome database
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, Human and Molecular Genetics Center, 8701 Watertown Plank Rd, Milwaukee, WI 53226 3548, USA
    Database (Oxford) 2013:bat015. 2013
    ..The curation interface development, as well as ontology development, was an ongoing process during the early stages of the PhenoMiner curation project. Database URL: http://rgd.mcw.edu...
  3. pmc Ontology searching and browsing at the Rat Genome Database
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226 3548, USA
    Database (Oxford) 2012:bas016. 2012
    ..The new ontology search, browser and report features have been designed to enhance both manual data curation and manual data extraction. DATABASE URL: http://rgd.mcw.edu/rgdweb/ontology/search.html...
  4. pmc The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, WI 53226 3548, USA
    Database (Oxford) 2011:bar002. 2011
    ..The user interfaces have been adapted to the work routines of the curators, creating a suite of tools that is intuitive and powerful. Database URL: http://rgd.mcw.edu...
  5. pmc The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database
    G Thomas Hayman
    Medical College of Wisconsin, Human and Molecular Genetics Center Department of Surgery, Medical College of Wisconsin, Milwaukee, WI, USA
    Database (Oxford) 2016:. 2016
    ..Collaborative efforts to realize a more robust disease ontology are underway. Database URL:http://rgd.mcw.edu...
  6. pmc Rat Genome Database: a unique resource for rat, human, and mouse quantitative trait locus data
    Rajni Nigam
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin
    Physiol Genomics 45:809-16. 2013
    ..The QTL data at RGD provide valuable information for the study of mapped phenotypes and identification of candidate genes for disease associations...
  7. pmc Exploring genetic, genomic, and phenotypic data at the rat genome database
    Stanley J F Laulederkind
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin, USA
    Curr Protoc Bioinformatics . 2012
    ..We present an overview of the database followed by specific examples that can be used to gain experience in employing RGD to explore the wealth of functional data available for the rat...
  8. pmc The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease
    Mary Shimoyama
    Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA Department of Surgery, Medical College of Wisconsin, Milwaukee, WI 53226, USA
    Nucleic Acids Res 43:D743-50. 2015
    ....
  9. pmc Analysis of disease-associated objects at the Rat Genome Database
    Shur Jen Wang
    Rat Genome Database, Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI 53226, USA
    Database (Oxford) 2013:bat046. 2013
    ..Furthermore, we were able to enhance enrichment of neurological diseases by combining 'G-protein coupled receptor binding' annotated genes with 'protein kinase binding' annotated genes. Database URL: http://rgd.mcw.edu..
  10. pmc PhenoMiner: a quantitative phenotype database for the laboratory rat, Rattus norvegicus. Application in hypertension and renal disease
    Shur Jen Wang
    Human and Molecular Genetics Center, Medical College of Wisconsin, Department of Physiology, Medical College of Wisconsin and Department of Surgery, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI53226, USA
    Database (Oxford) 2015:. 2015
    ..The availability of quantitative records across laboratories in one database, such as these provided by PhenoMiner, can empower researchers to make the best use of publicly available data. Database URL: http://rgd.mcw.edu. ..
  11. pmc Comprehensive coverage of cardiovascular disease data in the disease portals at the Rat Genome Database
    Shur Jen Wang
    Department of Surgery, Medical College of Wisconsin, Milwaukee, Wisconsin and
    Physiol Genomics 48:589-600. 2016
    ..The inclusion of disease genes from other databases enriches the collection of disease genes not only in quantity but also in quality. ..
  12. pmc Exploring human disease using the Rat Genome Database
    Mary Shimoyama
    Medical College of Wisconsin, Department of Surgery, Milwaukee, WI 53226, USA
    Dis Model Mech 9:1089-1095. 2016
    ..This article introduces RGD and its suite of tools and datasets to researchers - within and beyond the rat community - who are particularly interested in leveraging rat-based insights to understand human diseases...