Research Topics

Austin Huang

Summary

Affiliation: Massachusetts Institute of Technology
Country: USA

Publications

  1. doi request reprint QColors: an algorithm for conservative viral quasispecies reconstruction from short and non-contiguous next generation sequencing reads
    Austin Huang
    Division of Infectious Disease, Computer Science Department, Brown University, Box 1910, Providence, RI 02912, USA
    In Silico Biol 11:193-201. 2011
  2. pmc Phylogenetic Investigation of a Statewide HIV-1 Epidemic Reveals Ongoing and Active Transmission Networks Among Men Who Have Sex With Men
    Philip A Chan
    Division of Infectious Diseases, Department of Medicine, Alpert Medical School of Brown University, Providence, RI Center for Statistical Sciences, Brown University School of Public Health, Providence, RI Department of Pathology, University of Florida, Gainesville, FL and Fenway Health, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA
    J Acquir Immune Defic Syndr 70:428-35. 2015

Collaborators

  • Philip A Chan
  • Marco Salemi
  • Kenneth H Mayer
  • Allison DeLong
  • Joseph W Hogan
  • Rami Kantor

Detail Information

Publications2

  1. doi request reprint QColors: an algorithm for conservative viral quasispecies reconstruction from short and non-contiguous next generation sequencing reads
    Austin Huang
    Division of Infectious Disease, Computer Science Department, Brown University, Box 1910, Providence, RI 02912, USA
    In Silico Biol 11:193-201. 2011
    ..We demonstrate the utility of the method by applying it to simulations based on actual intra-patient clonal HIV-1 sequencing data...
  2. pmc Phylogenetic Investigation of a Statewide HIV-1 Epidemic Reveals Ongoing and Active Transmission Networks Among Men Who Have Sex With Men
    Philip A Chan
    Division of Infectious Diseases, Department of Medicine, Alpert Medical School of Brown University, Providence, RI Center for Statistical Sciences, Brown University School of Public Health, Providence, RI Department of Pathology, University of Florida, Gainesville, FL and Fenway Health, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA
    J Acquir Immune Defic Syndr 70:428-35. 2015
    ..Molecular epidemiological evaluation of HIV-1 transmission networks can elucidate behavioral components of transmission that can be targets for intervention...