Yong Huang

Summary

Affiliation: Iowa State University
Country: USA

Publications

  1. pmc A bootstrap based analysis pipeline for efficient classification of phylogenetically related animal miRNAs
    Yong Huang
    Department of Genetics, Development, and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, IA 50011, USA
    BMC Genomics 8:66. 2007
  2. pmc Differences in duplication age distributions between human GPCRs and their downstream genes from a network prospective
    Yong Huang
    Department of Genetics, Development, and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, IA 50011, USA
    BMC Genomics 10:S14. 2009
  3. doi request reprint Simultaneous expansions of microRNAs and protein-coding genes by gene/genome duplications in early vertebrates
    Xun Gu
    Department of Genetics, Development and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, Iowa 50011, USA
    J Exp Zool B Mol Dev Evol 312:164-70. 2009
  4. pmc Comparative study of human mitochondrial proteome reveals extensive protein subcellular relocalization after gene duplications
    Xiujuan Wang
    Interdepartmental Genetics Program, Iowa State University, Ames, IA 50011, USA
    BMC Evol Biol 9:275. 2009
  5. pmc A study of the evolution of human microRNAs by their apparent repression effectiveness on target genes
    Yong Huang
    Department of Genetics, Development, and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, Iowa, United States of America
    PLoS ONE 6:e25034. 2011
  6. ncbi request reprint Expression of the zebrafish CD133/prominin1 genes in cellular proliferation zones in the embryonic central nervous system and sensory organs
    Maura McGrail
    Department of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011, USA
    Dev Dyn 239:1849-57. 2010
  7. doi request reprint Protein-responsive imprinted polymers with specific shrinking and rebinding
    Zhiyong Chen
    College of Chemistry and Molecular Engineering, Peking University, Beijing, China
    J Mol Recognit 21:71-7. 2008
  8. pmc CAG-encoded polyglutamine length polymorphism in the human genome
    Stefanie L Butland
    UBC Bioinformatics Centre, Michael Smith Laboratories, University of British Columbia, Vancouver, Canada
    BMC Genomics 8:126. 2007
  9. ncbi request reprint Tissue-driven hypothesis with Gene Ontology (GO) analysis
    Zhixi Su
    Institutes of Biomedical Sciences, School of Life Sciences, Center for Evolutionary Biology, Fudan University, Shanghai, China
    Ann Biomed Eng 35:1088-94. 2007
  10. pmc Ulysses - an application for the projection of molecular interactions across species
    Danielle Kemmer
    Center for Genomics and Bioinformatics, Karolinska Institutet, 171 77 Stockholm, Sweden
    Genome Biol 6:R106. 2005

Collaborators

Detail Information

Publications13

  1. pmc A bootstrap based analysis pipeline for efficient classification of phylogenetically related animal miRNAs
    Yong Huang
    Department of Genetics, Development, and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, IA 50011, USA
    BMC Genomics 8:66. 2007
    ..Most of the current methods for miRNA classification rely heavily on manual inspection and lack measurements of the reliability of the results...
  2. pmc Differences in duplication age distributions between human GPCRs and their downstream genes from a network prospective
    Yong Huang
    Department of Genetics, Development, and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, IA 50011, USA
    BMC Genomics 10:S14. 2009
    ....
  3. doi request reprint Simultaneous expansions of microRNAs and protein-coding genes by gene/genome duplications in early vertebrates
    Xun Gu
    Department of Genetics, Development and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, Iowa 50011, USA
    J Exp Zool B Mol Dev Evol 312:164-70. 2009
    ..We further speculate that genetically lying behind the evolution of vertebrate complexity may be the proteome doubling and alterations of the epigenetic (including miRNA) machinery...
  4. pmc Comparative study of human mitochondrial proteome reveals extensive protein subcellular relocalization after gene duplications
    Xiujuan Wang
    Interdepartmental Genetics Program, Iowa State University, Ames, IA 50011, USA
    BMC Evol Biol 9:275. 2009
    ....
  5. pmc A study of the evolution of human microRNAs by their apparent repression effectiveness on target genes
    Yong Huang
    Department of Genetics, Development, and Cell Biology, Center for Bioinformatics and Biological Statistics, Iowa State University, Ames, Iowa, United States of America
    PLoS ONE 6:e25034. 2011
    ..This feature of miRNAs offers an unprecedented vantage point for evolutionary analysis of gene regulation...
  6. ncbi request reprint Expression of the zebrafish CD133/prominin1 genes in cellular proliferation zones in the embryonic central nervous system and sensory organs
    Maura McGrail
    Department of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011, USA
    Dev Dyn 239:1849-57. 2010
    ..Based on these analyses, the zebrafish prominin1 genes will be useful markers for examining proliferating cell populations in adult organs, tissues, and tumors...
  7. doi request reprint Protein-responsive imprinted polymers with specific shrinking and rebinding
    Zhiyong Chen
    College of Chemistry and Molecular Engineering, Peking University, Beijing, China
    J Mol Recognit 21:71-7. 2008
    ..The results indicated that the MIPs seemed to change shape to accommodate the conformation of the template protein leading to the formation of a shape complementary cavity...
  8. pmc CAG-encoded polyglutamine length polymorphism in the human genome
    Stefanie L Butland
    UBC Bioinformatics Centre, Michael Smith Laboratories, University of British Columbia, Vancouver, Canada
    BMC Genomics 8:126. 2007
    ....
  9. ncbi request reprint Tissue-driven hypothesis with Gene Ontology (GO) analysis
    Zhixi Su
    Institutes of Biomedical Sciences, School of Life Sciences, Center for Evolutionary Biology, Fudan University, Shanghai, China
    Ann Biomed Eng 35:1088-94. 2007
    ..It is also shown that sub-grouping genes into GO categories increased the sensitivity for detecting potential positive factors in expression divergence in the tissues...
  10. pmc Ulysses - an application for the projection of molecular interactions across species
    Danielle Kemmer
    Center for Genomics and Bioinformatics, Karolinska Institutet, 171 77 Stockholm, Sweden
    Genome Biol 6:R106. 2005
    ..The relevance of projections was assessed and validated against published reference collections. All source code is freely available, and the Ulysses system can be accessed via a web interface http://www.cisreg.ca/ulysses...
  11. pmc Atlas - a data warehouse for integrative bioinformatics
    Sohrab P Shah
    UBC Bioinformatics Centre, University of British Columbia, Vancouver, BC, Canada
    BMC Bioinformatics 6:34. 2005
    ..The goal of the system is to provide data, as well as a software infrastructure for bioinformatics research and development...
  12. ncbi request reprint Texture decomposition by harmonics extraction from higher order statistics
    Yong Huang
    School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore
    IEEE Trans Image Process 13:1-14. 2004
    ..The simulation and experimental results demonstrated that this method is effective for texture decomposition and it performs better than traditional lower order statistics based decomposition methods...
  13. ncbi request reprint Phylogenetic analysis of the hemagglutinin genes of twenty-six avian influenza viruses of subtype H9N2 isolated from chickens in China during 1996-2001
    Hongqi Liu
    Animal Infectious Disease Laboratory, School of Veterinary Medicine, Yangzhou University, Yangzhou, Jiangsu 225009, China
    Avian Dis 47:116-27. 2003
    ....