MARCY UYENOYAMA

Summary

Affiliation: Duke University Medical Center
Country: USA

Publications

  1. pmc Sex-specific incompatibility generates locus-specific rates of introgression between species
    Diana Fusco
    Computational Biology and Bioinformatics Program, Department of Biology, Duke University, Durham, North Carolina 27708 0090, USA
    Genetics 189:267-88. 2011
  2. ncbi request reprint Evolution under tight linkage to mating type
    Marcy K Uyenoyama
    Department of Biology, Box 90338, Duke University, Durham, NC 27708 0338, USA
    New Phytol 165:63-70. 2005
  3. pmc Evolutionary dynamics of self-incompatibility alleles in Brassica
    M K Uyenoyama
    Department of Zoology, Duke University, Durham, North Carolina 27708 0325, USA
    Genetics 156:351-9. 2000
  4. ncbi request reprint A simple method for computing exact probabilities of mutation numbers
    Marcy K Uyenoyama
    Department of Biology, Box 90338, 107 Bio Sci Building, Duke University, Durham, NC 27708 0338, USA
    Theor Popul Biol 65:271-84. 2004
  5. ncbi request reprint Genealogy-dependent variation in viability among self-incompatibility genotypes
    Marcy K Uyenoyama
    Department of Biology, Box 90338, 107 Bio Sci Building, Duke University, Durham, NC 27708 0338, USA
    Theor Popul Biol 63:281-93. 2003
  6. pmc On the origin of self-incompatibility haplotypes: transition through self-compatible intermediates
    M K Uyenoyama
    Department of Biology, Duke University, Durham, North Carolina 27708 0338, USA
    Genetics 157:1805-17. 2001
  7. ncbi request reprint Mutational origin of new mating type specificities in flowering plants
    M K Uyenoyama
    Department of Biology, Box 90338, Duke University, Durham, NC 27708 0338, USA
    Genes Genet Syst 75:305-11. 2000
  8. ncbi request reprint On the evolutionary costs of self-incompatibility: incomplete reproductive compensation due to pollen limitation
    Mario Vallejo-Marín
    Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 0338, USA
    Evolution 58:1924-35. 2004
  9. pmc Site frequency spectra from genomic SNP surveys
    Ganeshkumar Ganapathy
    National Evolutionary Synthesis Center, Durham, NC 27705 4667, USA
    Theor Popul Biol 75:346-54. 2009
  10. ncbi request reprint The evolutionary forest algorithm
    Scotland C Leman
    Institute of Statistics and Decision Sciences, Duke University, Durham, NC, USA
    Bioinformatics 23:1962-8. 2007

Detail Information

Publications14

  1. pmc Sex-specific incompatibility generates locus-specific rates of introgression between species
    Diana Fusco
    Computational Biology and Bioinformatics Program, Department of Biology, Duke University, Durham, North Carolina 27708 0090, USA
    Genetics 189:267-88. 2011
    ....
  2. ncbi request reprint Evolution under tight linkage to mating type
    Marcy K Uyenoyama
    Department of Biology, Box 90338, Duke University, Durham, NC 27708 0338, USA
    New Phytol 165:63-70. 2005
    ..This S-allele-specific load may influence the evolution of self-incompatibility systems...
  3. pmc Evolutionary dynamics of self-incompatibility alleles in Brassica
    M K Uyenoyama
    Department of Zoology, Duke University, Durham, North Carolina 27708 0325, USA
    Genetics 156:351-9. 2000
    ..This expectation appears to be consistent with empirical observations of high frequencies of relatively few distinct recessive haplotypes...
  4. ncbi request reprint A simple method for computing exact probabilities of mutation numbers
    Marcy K Uyenoyama
    Department of Biology, Box 90338, 107 Bio Sci Building, Duke University, Durham, NC 27708 0338, USA
    Theor Popul Biol 65:271-84. 2004
    ..Characterization of complete probability distributions facilitates parameter estimation and hypothesis testing by likelihood- as well as moment-based approaches...
  5. ncbi request reprint Genealogy-dependent variation in viability among self-incompatibility genotypes
    Marcy K Uyenoyama
    Department of Biology, Box 90338, 107 Bio Sci Building, Duke University, Durham, NC 27708 0338, USA
    Theor Popul Biol 63:281-93. 2003
    ..These effects may account for some of the unusual features observed in empirical studies of S-allele genealogies...
  6. pmc On the origin of self-incompatibility haplotypes: transition through self-compatible intermediates
    M K Uyenoyama
    Department of Biology, Duke University, Durham, North Carolina 27708 0338, USA
    Genetics 157:1805-17. 2001
    ....
  7. ncbi request reprint Mutational origin of new mating type specificities in flowering plants
    M K Uyenoyama
    Department of Biology, Box 90338, Duke University, Durham, NC 27708 0338, USA
    Genes Genet Syst 75:305-11. 2000
    ....
  8. ncbi request reprint On the evolutionary costs of self-incompatibility: incomplete reproductive compensation due to pollen limitation
    Mario Vallejo-Marín
    Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 0338, USA
    Evolution 58:1924-35. 2004
    ..This unanticipated result provides the first theoretical support for the evolutionary stability of such mixed mating systems, the existence of which has recently been documented...
  9. pmc Site frequency spectra from genomic SNP surveys
    Ganeshkumar Ganapathy
    National Evolutionary Synthesis Center, Durham, NC 27705 4667, USA
    Theor Popul Biol 75:346-54. 2009
    ..Some aspects of data filtering may contribute to significant departures of site frequency spectra from expectation, apart from any violation of the standard neutral model...
  10. ncbi request reprint The evolutionary forest algorithm
    Scotland C Leman
    Institute of Statistics and Decision Sciences, Duke University, Durham, NC, USA
    Bioinformatics 23:1962-8. 2007
    ..A novel feature is the updating of parameter values based on a probability measure defined on an ensemble of histories (a forest of genealogies), rather than a single tree...
  11. pmc Likelihoods from summary statistics: recent divergence between species
    Scotland C Leman
    Institute of Statistics and Decision Sciences, Duke University, Durham, North Carolina 27708, USA
    Genetics 171:1419-36. 2005
    ..Our results for the complete data set also compare well with those obtained through Metropolis-Hastings sampling of fully resolved genealogies of entire nucleotide sequences...
  12. ncbi request reprint Patterns of variation within self-incompatibility loci
    Naoki Takebayashi
    Department of Biology, Duke University, USA
    Mol Biol Evol 20:1778-94. 2003
    ..Our analysis further suggests that recombination between 48A and S-RNase may have occurred during the interval spanned by the gene genealogy, another indication that 48A may not regulate SI expression in pollen...
  13. pmc Maximum-likelihood estimation of rates of recombination within mating-type regions
    Naoki Takebayashi
    Department of Biology, Duke University, Durham, North Carolina 27708 0338, USA
    Genetics 167:2097-109. 2004
    ..This approach may facilitate the construction of genetic maps of regions tightly linked to targets of strong balancing selection...
  14. ncbi request reprint The evolutionary dynamics of self-incompatibility systems
    Ed Newbigin
    School of Botany, University of Melbourne, Victoria 3010, Australia
    Trends Genet 21:500-5. 2005
    ..Accelerated substitution within specificity classes could also promote the origin of new S-allele specificities...