Research Topics
 John A BungeSummaryAffiliation: Cornell University Country: USA Publications
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Publications
 Estimating the number of species with CatchAllJohn Bunge
Department of Statistical Science, 1198 Comstock Hall, Cornell University, Ithaca, NY 14853, USA
Pac Symp Biocomput . 2011..We briefly describe the software and its mathematical underpinnings (which are treated in depth elsewhere), and we work through an applied example from microbial ecology in detail...  Estimating population diversity with unreliable low frequency countsJohn Bunge
Department of Statistical Science, Cornell University, Ithaca, NY 14853, USA
Pac Symp Biocomput . 2012..We find that these purely statistical "downstream" corrections will depend strongly on their underlying assumptions, but that such methods can be useful nonetheless...  Estimating population diversity with CatchAllJohn Bunge
Department of Statistical Science, Cornell University, Ithaca, NY 14853, USA
Bioinformatics 28:10457. 2012..There is a need for software employing modern, computationally intensive statistical analyses including error, goodnessoffit and robustness assessments...  Comment on "Computational improvements reveal great bacterial diversity and high metal toxicity in soil"John Bunge
Department of Statistical Science, Cornell University, Ithaca, NY 14853, USA
Science 313:918; author reply 918. 2006..We also note two potential sources of error in the experimental data collection and measurement procedures...  Parametric models for estimating the number of classesJohn Bunge
Departgment of Statistical Science, Cornell University, Ithaca, NY 14853, USA
Biom J 50:97182. 2008..Finally we consider the connections between parametric models for abundance and incidence data, again noting the usefulness of finite mixture models...  Environmental rRNA inventories miss over half of protistan diversitySunok Jeon
Department of Environmental Science, Kangwon National University, Kangwon Do, Korea
BMC Microbiol 8:222. 2008..Here we attempt to discriminate between these possibilities by statistically analysing four protistan inventories obtained using different general eukaryotic PCR primers...  A bacterial artificial chromosome library for the Australian saltwater crocodile (Crocodylus porosus) and its utilization in gene isolation and genome characterizationXueyan Shan
Mississippi Genome Exploration Laboratory, Department of Plant and Soil Sciences, Mississippi State University, Mississippi State, MS, USA
BMC Genomics 10:S9. 2009..This is the first BAC library for a crocodile and only the second BAC resource for a crocodilian...