S Gaudan

Summary

Affiliation: Wellcome Trust Genome Campus
Country: UK

Publications

  1. pmc Combining evidence, specificity, and proximity towards the normalization of Gene Ontology terms in text
    S Gaudan
    European Bioinformatics Institute, Cambridge, UK
    EURASIP J Bioinform Syst Biol . 2008
  2. pmc Rapid identification of PAX2/5/8 direct downstream targets in the otic vesicle by combinatorial use of bioinformatics tools
    Mirana Ramialison
    Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstrasse 1, Heidelberg, Germany
    Genome Biol 9:R145. 2008
  3. pmc Assessment of disease named entity recognition on a corpus of annotated sentences
    Antonio Jimeno
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    BMC Bioinformatics 9:S3. 2008
  4. pmc Integrating protein-protein interactions and text mining for protein function prediction
    Samira Jaeger
    Knowledge Management in Bioinformatics, Humboldt University Berlin, Unter den Linden 6, 10099 Berlin, Germany
    BMC Bioinformatics 9:S2. 2008
  5. ncbi request reprint Resolving abbreviations to their senses in Medline
    S Gaudan
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
    Bioinformatics 21:3658-64. 2005

Collaborators

  • Dietrich Rebholz-Schuhman
  • Antonio Jimeno
  • Mirana Ramialison
  • Samira Jaeger
  • Dietrich Rebholz-Schuhmann
  • Ulf Leser
  • Baubak Bajoghli
  • Narges Aghaallaei
  • Rafael Berlanga
  • Ernesto Jimenez-Ruiz
  • Joachim Wittbrodt
  • Vivian Lee
  • Beate Wittbrodt
  • Laurence Ettwiller
  • Thomas Czerny

Detail Information

Publications5

  1. pmc Combining evidence, specificity, and proximity towards the normalization of Gene Ontology terms in text
    S Gaudan
    European Bioinformatics Institute, Cambridge, UK
    EURASIP J Bioinform Syst Biol . 2008
    ..This observation is explained by the average number of words forming the terminology over the different subbranches...
  2. pmc Rapid identification of PAX2/5/8 direct downstream targets in the otic vesicle by combinatorial use of bioinformatics tools
    Mirana Ramialison
    Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstrasse 1, Heidelberg, Germany
    Genome Biol 9:R145. 2008
    ..However, little is known about the direct downstream targets and, so far, no global approaches have been performed to identify these target genes in this particular tissue...
  3. pmc Assessment of disease named entity recognition on a corpus of annotated sentences
    Antonio Jimeno
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    BMC Bioinformatics 9:S3. 2008
    ....
  4. pmc Integrating protein-protein interactions and text mining for protein function prediction
    Samira Jaeger
    Knowledge Management in Bioinformatics, Humboldt University Berlin, Unter den Linden 6, 10099 Berlin, Germany
    BMC Bioinformatics 9:S2. 2008
    ..To enhance the precision of the results, we furthermore implemented a procedure that validates all predictions based on findings reported in the literature...
  5. ncbi request reprint Resolving abbreviations to their senses in Medline
    S Gaudan
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
    Bioinformatics 21:3658-64. 2005
    ..Resolving an abbreviation in a document consists of retrieving its sense in use. Abbreviation resolution improves accuracy of document retrieval engines and of information extraction systems...