Maria J Schilstra

Summary

Affiliation: University of Hertfordshire
Country: UK

Publications

  1. ncbi request reprint Circular dichroism and its application to the study of biomolecules
    Stephen R Martin
    Division of Physical Biochemistry, MRC National Institute for Medical Research, The Ridgeway, Mill Hill, London NW7 1AA, United Kingdom
    Methods Cell Biol 84:263-93. 2008
  2. ncbi request reprint CellML2SBML: conversion of CellML into SBML
    Maria J Schilstra
    Biological and Neural Computation Group, STRI, University of Hertfordshire, Hatfield AL10 9AB, UK
    Bioinformatics 22:1018-20. 2006
  3. pmc An elastically tethered viscous load imposes a regular gait on the motion of myosin-V. Simulation of the effect of transient force relaxation on a stochastic process
    Maria J Schilstra
    University of Hertfordshire Biocomputation Research Group, STRI College Lane, Hatfield AL10 9AB, UK
    J R Soc Interface 3:153-65. 2006
  4. doi request reprint Bio-logic: gene expression and the laws of combinatorial logic
    Maria J Schilstra
    Biological and Neural Computation Group, Science and Technology Research Institute, University of Hertfordshire, College Lane, Hatfield, Hertfordshire AL10 9AB, United Kingdom
    Artif Life 14:121-33. 2008
  5. doi request reprint Exploring the concept of interaction computing through the discrete algebraic analysis of the Belousov-Zhabotinsky reaction
    Paolo Dini
    Royal Society Wolfson BioComputation Research Lab, Centre for Computer Science and Informatics Research, University of Hertfordshire, Hatfield, Hertfordshire, United Kingdom
    Biosystems 112:145-62. 2013
  6. doi request reprint Do motifs reflect evolved function?--No convergent evolution of genetic regulatory network subgraph topologies
    Johannes F Knabe
    Adaptive Systems and BioComputation Research Groups, University of Hertfordshire, Hatfield, UK
    Biosystems 94:68-74. 2008
  7. doi request reprint Simple stochastic simulation
    Maria J Schilstra
    Biological and Neural Computation Group, Science and Technology Research Institute, University of Hertfordshire, Hatfield, UK
    Methods Enzymol 467:381-409. 2009
  8. doi request reprint Genetic algorithms and their application to in silico evolution of genetic regulatory networks
    Johannes F Knabe
    Biological and Neural Computation Laboratory and Adaptive Systems Research Group, STRI, University of Hertfordshire, Hatfield, Hertfordshire, UK
    Methods Mol Biol 673:297-321. 2010
  9. doi request reprint Genetic regulatory network models of biological clocks: evolutionary history matters
    Johannes F Knabe
    Adaptive Systems Research Group, School of Computer Science, University of Hertfordshire, Hatfield, Hertfordshire AL10 9AB, United Kingdom
    Artif Life 14:135-48. 2008
  10. doi request reprint Stochastic model of template-directed elongation processes in biology
    Maria J Schilstra
    Biocomputation Research Group, Science and Technology Research Institute, University of Hertfordshire, College Lane, Hatfield AL109AB, UK
    Biosystems 102:55-60. 2010

Collaborators

Detail Information

Publications12

  1. ncbi request reprint Circular dichroism and its application to the study of biomolecules
    Stephen R Martin
    Division of Physical Biochemistry, MRC National Institute for Medical Research, The Ridgeway, Mill Hill, London NW7 1AA, United Kingdom
    Methods Cell Biol 84:263-93. 2008
    ....
  2. ncbi request reprint CellML2SBML: conversion of CellML into SBML
    Maria J Schilstra
    Biological and Neural Computation Group, STRI, University of Hertfordshire, Hatfield AL10 9AB, UK
    Bioinformatics 22:1018-20. 2006
    ..Of all 306 models in the CellML repository in April 2005, CellML2SBML converted 91% automatically into SBML. Minor manual changes to the unit definitions in the originals raised the percentage of successful conversions to 96%...
  3. pmc An elastically tethered viscous load imposes a regular gait on the motion of myosin-V. Simulation of the effect of transient force relaxation on a stochastic process
    Maria J Schilstra
    University of Hertfordshire Biocomputation Research Group, STRI College Lane, Hatfield AL10 9AB, UK
    J R Soc Interface 3:153-65. 2006
    ..Multiple thresholds limit the variation in tether length to values below that of the total step size...
  4. doi request reprint Bio-logic: gene expression and the laws of combinatorial logic
    Maria J Schilstra
    Biological and Neural Computation Group, Science and Technology Research Institute, University of Hertfordshire, College Lane, Hatfield, Hertfordshire AL10 9AB, United Kingdom
    Artif Life 14:121-33. 2008
    ....
  5. doi request reprint Exploring the concept of interaction computing through the discrete algebraic analysis of the Belousov-Zhabotinsky reaction
    Paolo Dini
    Royal Society Wolfson BioComputation Research Lab, Centre for Computer Science and Informatics Research, University of Hertfordshire, Hatfield, Hertfordshire, United Kingdom
    Biosystems 112:145-62. 2013
    ..The possible computational relevance of these findings is discussed and possible conclusions are drawn...
  6. doi request reprint Do motifs reflect evolved function?--No convergent evolution of genetic regulatory network subgraph topologies
    Johannes F Knabe
    Adaptive Systems and BioComputation Research Groups, University of Hertfordshire, Hatfield, UK
    Biosystems 94:68-74. 2008
    ..This suggests that in non-restricted, bigger networks, entanglement with the rest of the network hinders topological subgraph analysis...
  7. doi request reprint Simple stochastic simulation
    Maria J Schilstra
    Biological and Neural Computation Group, Science and Technology Research Institute, University of Hertfordshire, Hatfield, UK
    Methods Enzymol 467:381-409. 2009
    ....
  8. doi request reprint Genetic algorithms and their application to in silico evolution of genetic regulatory networks
    Johannes F Knabe
    Biological and Neural Computation Laboratory and Adaptive Systems Research Group, STRI, University of Hertfordshire, Hatfield, Hertfordshire, UK
    Methods Mol Biol 673:297-321. 2010
    ....
  9. doi request reprint Genetic regulatory network models of biological clocks: evolutionary history matters
    Johannes F Knabe
    Adaptive Systems Research Group, School of Computer Science, University of Hertfordshire, Hatfield, Hertfordshire AL10 9AB, United Kingdom
    Artif Life 14:135-48. 2008
    ..Unselected abilities, also observed for biological clocks, include the capacity to adapt to change in wavelength of environmental stimulus and to clock resetting...
  10. doi request reprint Stochastic model of template-directed elongation processes in biology
    Maria J Schilstra
    Biocomputation Research Group, Science and Technology Research Institute, University of Hertfordshire, College Lane, Hatfield AL109AB, UK
    Biosystems 102:55-60. 2010
    ....
  11. ncbi request reprint Methods for simulating the dynamics of complex biological processes
    Maria J Schilstra
    Biological and Neural Computation Group, Science and Technology Research Institute, University of Hertfordshire, College Lane, Hatfield AL10 9AB, United Kingdom
    Methods Cell Biol 84:807-42. 2008
    ..We draw some attention to the development of a standard format for model storage and exchange, and provide a list of selected software tools that may facilitate the model building process, and can be used to simulate the modeled systems...
  12. doi request reprint Automatic analysis of computation in biochemical reactions
    Attila Egri-Nagy
    The Royal Society, Wolfson Foundation BioComputation Laboratory and Algorithms Research Group, Centre for Computer Science and Informatics Research, University of Hertfordshire, Hatfield, Hertfordshire, United Kingdom
    Biosystems 94:126-34. 2008
    ..We also outline techniques for the flexible manipulation of existing models. As a real-world example we use the Krebs citric acid cycle...