Haruyoshi Takagi

Summary

Affiliation: Ibaraki University
Country: Japan

Publications

  1. ncbi request reprint Cloning, nucleotide sequence and module structure of the gene encoding the cellulose-binding protein B (CBPB) of Eubacterium cellulosolvens 5
    Atsushi Toyoda
    Division of Animal Science, College of Agriculture, Ibaraki University, Japan
    J Gen Appl Microbiol 51:213-20. 2005
  2. ncbi request reprint Purification, characterization, and gene analysis of cellulase (Cel8A) from Lysobacter sp. IB-9374
    Jiro Ogura
    United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Japan
    Biosci Biotechnol Biochem 70:2420-8. 2006
  3. pmc Effects of chronic social defeat stress on peripheral leptin and its hypothalamic actions
    Wataru Iio
    Department of Biological Production Science, United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo 183 8509, Japan
    BMC Neurosci 15:72. 2014
  4. doi request reprint Antidepressant-like effect of chronic taurine administration and its hippocampal signal transduction in rats
    Atsushi Toyoda
    College of Agriculture, Ibaraki University, Ibaraki, Japan
    Adv Exp Med Biol 775:29-43. 2013
  5. pmc Isolation and identification of cellulose-binding proteins from sheep rumen contents
    Atsushi Toyoda
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan
    Appl Environ Microbiol 75:1667-73. 2009
  6. ncbi request reprint PCR detection of bovine mitochondrial DNA derived from meat and bone meal in feed
    Atsushi Toyoda
    College of Agriculture, Ibaraki University, Ibaraki 300 0393, Japan
    J Food Prot 67:2829-32. 2004
  7. ncbi request reprint A possible role of cellulose-binding protein A (CBPA) in the adhesion of Eubacterium cellulosolvens 5 to cellulose
    Atsushi Toyoda
    Division of Animal Science, College of Agriculture, Ibaraki University, Ibaraki 300 0393, Japan
    J Gen Appl Microbiol 49:245-50. 2003
  8. doi request reprint Effect of diet composition on coenzyme A and its thioester pools in various rat tissues
    Yuka Tokutake
    Department of Applied Life Science, United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, 3 5 8 Saiwai, Fuchu, Tokyo 183 8509, Japan
    Biochem Biophys Res Commun 423:781-4. 2012
  9. ncbi request reprint Biochemical characterization of cellulose-binding proteins (CBPA and CBPB) from the rumen cellulolytic bacterium Eubacterium cellulosolvens 5
    Miho Yoshimatsu
    United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Japan
    Biosci Biotechnol Biochem 71:2577-80. 2007
  10. doi request reprint The effects of oral taurine administration on behavior and hippocampal signal transduction in rats
    Wataru Iio
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan
    Amino Acids 43:2037-46. 2012

Collaborators

Detail Information

Publications34

  1. ncbi request reprint Cloning, nucleotide sequence and module structure of the gene encoding the cellulose-binding protein B (CBPB) of Eubacterium cellulosolvens 5
    Atsushi Toyoda
    Division of Animal Science, College of Agriculture, Ibaraki University, Japan
    J Gen Appl Microbiol 51:213-20. 2005
    ..cellulosolvens 5. The amino acid sequence of CBPB had a significant homology (64.15% sequence identity) with that of CBPA. These results suggest that cbpA and cbpB genes descended from the same ancestral cellulase gene...
  2. ncbi request reprint Purification, characterization, and gene analysis of cellulase (Cel8A) from Lysobacter sp. IB-9374
    Jiro Ogura
    United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Japan
    Biosci Biotechnol Biochem 70:2420-8. 2006
    ..The amino acid sequence of the Cel8A, which contains the catalytic module of glycosyl hydrolase family 8, is homologous to beta-1,3-1,4-D-glucanase from Bacillus circulans WL-12 and endoglucanase N-257 from B. circulans KSM-N257...
  3. pmc Effects of chronic social defeat stress on peripheral leptin and its hypothalamic actions
    Wataru Iio
    Department of Biological Production Science, United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo 183 8509, Japan
    BMC Neurosci 15:72. 2014
    ..However, the condition of peripheral leptin and its hypothalamic downstream signal molecules which regulate hypothalamic malonyl-CoA level in the CSDS-exposed rats (CSDS rats) is still unknown...
  4. doi request reprint Antidepressant-like effect of chronic taurine administration and its hippocampal signal transduction in rats
    Atsushi Toyoda
    College of Agriculture, Ibaraki University, Ibaraki, Japan
    Adv Exp Med Biol 775:29-43. 2013
    ..In conclusion, our discoveries suggest that taurine supplementation has an antidepressant-like effect and an ability to change depression-related signaling cascades in the hippocampus...
  5. pmc Isolation and identification of cellulose-binding proteins from sheep rumen contents
    Atsushi Toyoda
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan
    Appl Environ Microbiol 75:1667-73. 2009
    ..The finding that four of the five CBPs isolated and identified from sheep rumen contents were from F. succinogenes indicates that F. succinogenes is significantly involved in cellulose degradation in the rumen...
  6. ncbi request reprint PCR detection of bovine mitochondrial DNA derived from meat and bone meal in feed
    Atsushi Toyoda
    College of Agriculture, Ibaraki University, Ibaraki 300 0393, Japan
    J Food Prot 67:2829-32. 2004
    ..However, the exclusion of this treatment improved the detection limit of bovine MBM in feed. This method appears suitable for the selective detection of bovine MBM in feed...
  7. ncbi request reprint A possible role of cellulose-binding protein A (CBPA) in the adhesion of Eubacterium cellulosolvens 5 to cellulose
    Atsushi Toyoda
    Division of Animal Science, College of Agriculture, Ibaraki University, Ibaraki 300 0393, Japan
    J Gen Appl Microbiol 49:245-50. 2003
    ..CBPA rapidly decreased the viscosity of CMC, indicating that CBPA was endoglucanase. The results obtained in this study indicate that CBPA plays an important role in the adhesion of E. cellulosolvens 5 cells to cellulose...
  8. doi request reprint Effect of diet composition on coenzyme A and its thioester pools in various rat tissues
    Yuka Tokutake
    Department of Applied Life Science, United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, 3 5 8 Saiwai, Fuchu, Tokyo 183 8509, Japan
    Biochem Biophys Res Commun 423:781-4. 2012
    ....
  9. ncbi request reprint Biochemical characterization of cellulose-binding proteins (CBPA and CBPB) from the rumen cellulolytic bacterium Eubacterium cellulosolvens 5
    Miho Yoshimatsu
    United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Japan
    Biosci Biotechnol Biochem 71:2577-80. 2007
    ..Both proteins bound to insoluble polysaccharides such as Avicel cellulose, acid swollen cellulose, lichenan, chitin, and oat spelt xylan. On the other hand, only recombinant CBPB bound to agarose and starch...
  10. doi request reprint The effects of oral taurine administration on behavior and hippocampal signal transduction in rats
    Wataru Iio
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan
    Amino Acids 43:2037-46. 2012
    ..In conclusion, our findings suggest that taurine has an antidepressant-like effect and an ability to change depression-related signaling cascades in the hippocampus...
  11. doi request reprint Anorexic behavior and elevation of hypothalamic malonyl-CoA in socially defeated rats
    Wataru Iio
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan
    Biochem Biophys Res Commun 421:301-4. 2012
    ..Our findings suggest that the suppression of body weight gain caused by social defeat stress is caused by anorexic feeding behavior via an increased concentration of malonyl-CoA in the hypothalamus...
  12. ncbi request reprint Identification of the cellulose-binding and the cell wall-binding domains of Eubacterium cellulosolvens 5 cellulose-binding protein A (CBPA)
    Atsushi Toyoda
    College of Agriculture, Ibaraki University, Ami, Japan
    FEMS Microbiol Lett 214:113-8. 2002
    ..cellulosolvens 5, the region has been identified as the CWBD. However, the CWBD did not show a significant sequence similarity with any other proteins previously reported...
  13. pmc Cloning, sequencing, and expression of a Eubacterium cellulosolvens 5 gene encoding an endoglucanase (Cel5A) with novel carbohydrate-binding modules, and properties of Cel5A
    Kazutoyo Yoda
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan
    Appl Environ Microbiol 71:5787-93. 2005
    ..Removal of the CBMs from rCel5A reduced the catalytic activities with various polysaccharides remarkably. These observations show that CBMs play an important role in the catalytic function of the enzyme...
  14. ncbi request reprint Cloning, nucleotide sequence and expression of the gene encoding the cellulose-binding protein A (CBPA) of Eubacterium cellulosolvens 5
    Atsushi Toyoda
    School of Agriculture, Ibaraki University, Ami, 300 0393, Ibaraki, Japan
    FEMS Microbiol Lett 207:141-6. 2002
    ..The cloned gene was inserted into an expression vector, pBAD-TOPO, and expressed in Escherichia coli as a fused protein. The fused protein was detected by immunoblotting using antiserum against CBPA...
  15. doi request reprint Effects of chronic social defeat stress on MAP kinase cascade
    Wataru Iio
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan
    Neurosci Lett 504:281-4. 2011
    ..In conclusion, our findings suggest that chronic psychosocial stress in Wistar rats induced depression-like behavior and downregulated the MAPK cascade in the hippocampus...
  16. doi request reprint Coenzyme A and its thioester pools in fasted and fed rat tissues
    Yuka Tokutake
    Department of Applied Life Science, United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, 3 5 8 Saiwai, Fuchu, Tokyo 183 8509, Japan
    Biochem Biophys Res Commun 402:158-62. 2010
    ..Thus, a comprehensive analysis of thirteen types of rat tissue revealed that CoA pools have different sizes and showed a different response to fasting and feeding depending on the tissue...
  17. doi request reprint Subchronic and mild social defeat stress accelerates food intake and body weight gain with polydipsia-like features in mice
    Tatsuhiko Goto
    College of Agriculture, Ibaraki University, Ami, Ibaraki 300 0393, Japan Ibaraki University Cooperation between Agriculture and Medical Science IUCAM, Ami, Ibaraki 300 0393, Japan
    Behav Brain Res 270:339-48. 2014
    ..This study reports the first step toward an understanding of the mechanisms of stress-induced overhydration, over-eating and resultant weight gain. ..
  18. doi request reprint The effects of concentrations of lysine in media on differentiation of 3T3-L1 preadipocytes
    Takahito Kyoya
    United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan
    Anim Sci J 82:565-70. 2011
    ..These results indicate that low lysine concentrations in culture medium inhibit differentiation of 3T3-L1 preadipocytes through inhibiting the mRNA expressions of PPARγ and C/EBPα...
  19. ncbi request reprint BAC library construction and BAC end sequencing of five Drosophila species: the comparative map with the D. melanogaster genome
    Katsuhiko Murakami
    RIKEN Genomic Sciences Center, Kanagawa, Japan
    Genes Genet Syst 83:245-56. 2008
    ..Corresponding breakpoints were also identified in D. sechellia. The BAC clones described here will be an important addition to the Drosophila genomic resources...
  20. ncbi request reprint Comparison of 30 immunity-related genes from the common marmoset with orthologues from human and mouse
    Kazuyoshi Kohu
    Department of Molecular Immunology, Institute of Development, Aging and Cancer, Tohoku University, Sendai, Japan
    Tohoku J Exp Med 215:167-80. 2008
    ..This suggests that these immunity-related genes do not evolve at a uniform rate. Interestingly, however, ligand/receptor pairs such as interleukin-6 and interleukin-6 receptor appear to have evolved simultaneously...
  21. doi request reprint Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
    Toshiaki Watanabe
    Division of Human Genetics, Department of Integrated Genetics, National Institute of Genetics, Research Organization of Information and Systems, Mishima 411 8540, Japan
    Nature 453:539-43. 2008
    ..Our results reveal a role for endogenous siRNAs in mammalian oocytes and show that organisms lacking RdRP activity can produce functional endogenous siRNAs from naturally occurring dsRNAs...
  22. pmc Complete genome of the uncultured Termite Group 1 bacteria in a single host protist cell
    Yuichi Hongoh
    Environmental Molecular Biology Laboratory, RIKEN, Saitama 351 0198, Japan
    Proc Natl Acad Sci U S A 105:5555-60. 2008
    ..Our results provide a breakthrough to clarify the functions of and the interactions among the individual members of this multilayered symbiotic complex...
  23. ncbi request reprint Identification of two novel primate-specific genes in DSCR
    Kunihiko Takamatsu
    Laboratory of Functional Genomics Human Genome Center, Institute of Medical Science, University of Tokyo, Japan
    DNA Res 9:89-97. 2002
    ..These results strongly suggest that DSCR9 and DSCR10 have emerged as a new class of gene in the primate lineage during evolution...
  24. ncbi request reprint Breakpoints at 1p36.3 in three MDS/AML(M4) patients with t(1;3)(p36;q21) occur in the first intron and in the 5' region of MEL1
    Phan Thi Xinh
    Division of Molecular Cytogenetics, Department of Clinical Pathology, Research Institute of International Medical Center of Japan, Tokyo, Japan
    Genes Chromosomes Cancer 36:313-6. 2003
    ..This patient showed an unusual clinical profile, repeating progression to overt leukemia and conversion to MDS three times during the 29-month survival period, which might be related to a different molecular mechanism in this patient...
  25. ncbi request reprint The zebrafish-secreted matrix protein you/scube2 is implicated in long-range regulation of hedgehog signaling
    Atsushi Kawakami
    Department of Biological Science, University of Tokyo, 7 3 1 Hongo, Bunkyo ku, Tokyo 113 0033, Japan
    Curr Biol 15:480-8. 2005
    ..We further show that Bmp activity can be attenuated by the coexpression of Scube2. Our data support the idea that Scube2 can modulate the long-range action of Bmp-dependent signaling in the neural tube and somites...
  26. ncbi request reprint Effect of Helicobacter pylori on DNA synthesis of human epithelial cells
    Atsushi Toyoda
    Department of Otolaryngology, Kyorin University School of Medicine, Tokyo, Japan
    J Infect Chemother 11:129-35. 2005
    ..The results suggest that two proteins with molecular weights of 18 and 45 kDa, respectively, are associated with stimulation of DNA synthesis by MKN45 cells...
  27. ncbi request reprint Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway
    Yoko Kuroki
    RIKEN Genomic Sciences Center, Yokohama 230 0045, Japan
    Nat Genet 38:158-67. 2006
    ..Reconstruction of the common ancestral Y chromosome reflects the dynamic changes in our genomes in the 5-6 million years since speciation...
  28. pmc A large-scale full-length cDNA analysis to explore the budding yeast transcriptome
    Fumihito Miura
    Department of Computational Biology, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa 277 8561, Japan
    Proc Natl Acad Sci U S A 103:17846-51. 2006
    ..The budding yeast will serve as a versatile model for the studies on these aspects of transcriptome, and the full-length cDNA clones can function as an invaluable resource in such studies...
  29. ncbi request reprint An oligodendrocyte enhancer in a phylogenetically conserved intron region of the mammalian myelin gene Opalin
    Jun Aruga
    Laboratory for Comparative Neurogenesis, RIKEN Brain Science Institute, Wako Shi, Saitama, Japan
    J Neurochem 102:1533-47. 2007
    ..These results suggest that LIF, cAMP signaling cascades and Myt1 play significant roles in the differentiation of oligodendrocytes through their action on the Opalin oligodendrocyte enhancer...
  30. pmc Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
    Ken Kurokawa
    Laboratory of Comparative Genomics, Graduate School of Information Science, Nara Institute of Science and Technology, Ikoma, Nara, Japan
    DNA Res 14:169-81. 2007
    ..In addition, we discovered a conjugative transposon family explosively amplified in human gut microbiomes, which strongly suggests that the intestine is a 'hot spot' for horizontal gene transfer between microbes...
  31. ncbi request reprint Structures of the three homoeologous loci of wheat benzoxazinone biosynthetic genes TaBx3 and TaBx4 and characterization of their promoter sequences
    Taiji Nomura
    Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University, Kyoto, 606 8502, Japan
    Theor Appl Genet 116:373-81. 2008
    ..The promoter activity measured by transient assays in wheat protoplasts was similar among the three homoeologs of TaBx3 and TaBx4 in spite of their differential transcript levels in wheat seedlings...
  32. pmc Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones
    Tokihiko Nanjo
    Department of Molecular and Cell Biology, Forestry and Forest Products Research Institute FFPRI, 1 Matsunosato, Tsukuba, Ibaraki 305 8687 JAPAN
    BMC Genomics 8:448. 2007
    ..ESTs from full-length cDNA clones are especially powerful for accurate molecular annotation. We promoted collection and annotation of the ESTs from Populus full-length enriched cDNA clones as part of functional genomics of tree species...
  33. pmc Sequencing analysis of 20,000 full-length cDNA clones from cassava reveals lineage specific expansions in gene families related to stress response
    Tetsuya Sakurai
    Metabolomics Research Group, RIKEN Plant Science Center, 1 7 22 Suehiro cho, Tsurumi ku, Yokohama, 230 0045, Japan
    BMC Plant Biol 7:66. 2007
    ..A full-length cDNA library of cassava plants under normal, heat, drought, aluminum and post harvest physiological deterioration conditions was built; 19968 clones were sequence-characterized using expressed sequence tags (ESTs)...
  34. ncbi request reprint Construction and analysis of a human-chimpanzee comparative clone map
    Asao Fujiyama
    RIKEN Genomic Sciences Center, 1 7 22 Suehiro cho, Tsurumi ku, Yokohama, Kanagawa 230 0045, Japan
    Science 295:131-4. 2002
    ..We detected candidate positions, including two clusters on human chromosome 21 that suggest large, nonrandom regions of difference between the two genomes...