Daniel Remondini

Summary

Affiliation: University of Bologna
Country: Italy

Publications

  1. doi request reprint Complex patterns of gene expression in human T cells during in vivo aging
    Daniel Remondini
    Department of Physics, University of Bologna, Viale Berti Pichat 6 2, 40127 Bologna, Italy
    Mol Biosyst 6:1983-92. 2010
  2. doi request reprint Multiscale characterization of ageing and cancer progression by a novel network entropy measure
    Giulia Menichetti
    Department of Physics and Astronomy and INFN, Bologna University, Viale B Pichat 6 2, 40127 Bologna, Italy
    Mol Biosyst 11:1824-31. 2015
  3. pmc Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
    Nicola Neretti
    Institute for Brain and Neural Systems, Brown University, Providence RI, USA
    BMC Bioinformatics 8:S16. 2007
  4. pmc Reconstructing networks of pathways via significance analysis of their intersections
    Mirko Francesconi
    Centro Interdipartimentale L, Galvani, Universita di Bologna, Bologna 40127, Italy
    BMC Bioinformatics 9:S9. 2008
  5. pmc Trends in modeling Biomedical Complex Systems
    Luciano Milanesi
    Institute of Biomedical Technology, National Research Council, Milan, Italy
    BMC Bioinformatics 10:I1. 2009
  6. ncbi request reprint Age-dependent effects of in vitro radiofrequency exposure (mobile phone) on CD95+ T helper human lymphocytes
    Miriam Capri
    CIG, Interdepartmental Center L Galvani, University of Bologna, Italy
    Ann N Y Acad Sci 1067:493-9. 2006
  7. doi request reprint Molecular remodeling of potassium channels in fibroblasts from centenarians: a marker of longevity?
    Isabella Zironi
    Department of Physics, University of Bologna, 40127 Bologna, Italy
    Mech Ageing Dev 131:674-81. 2010
  8. doi request reprint Stochastic neutral modelling of the Gut Microbiota's relative species abundance from next generation sequencing data
    Claudia Sala
    Department of Physics and Astronomy, University of Bologna, Bologna, 40127, Italy
    BMC Bioinformatics 17:16. 2016
  9. ncbi request reprint 50 Hz sinusoidal magnetic fields do not affect human lymphocyte activation and proliferation in vitro
    Miriam Capri
    Department of Experimental Pathology, Via S Giacomo 12, University of Bologna, 40126 Bologna, Italy
    Phys Biol 1:211-9. 2004
  10. doi request reprint ELF magnetic fields tuned to ion parametric resonance conditions do not affect TEA-sensitive voltage-dependent outward K(+) currents in a human neural cell line
    Entelë Gavoçi
    Department of Physics and Astronomy, University of Bologna, Bologna, Italy
    Bioelectromagnetics 34:579-88. 2013

Collaborators

Detail Information

Publications21

  1. doi request reprint Complex patterns of gene expression in human T cells during in vivo aging
    Daniel Remondini
    Department of Physics, University of Bologna, Viale Berti Pichat 6 2, 40127 Bologna, Italy
    Mol Biosyst 6:1983-92. 2010
    ....
  2. doi request reprint Multiscale characterization of ageing and cancer progression by a novel network entropy measure
    Giulia Menichetti
    Department of Physics and Astronomy and INFN, Bologna University, Viale B Pichat 6 2, 40127 Bologna, Italy
    Mol Biosyst 11:1824-31. 2015
    ....
  3. pmc Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
    Nicola Neretti
    Institute for Brain and Neural Systems, Brown University, Providence RI, USA
    BMC Bioinformatics 8:S16. 2007
    ....
  4. pmc Reconstructing networks of pathways via significance analysis of their intersections
    Mirko Francesconi
    Centro Interdipartimentale L, Galvani, Universita di Bologna, Bologna 40127, Italy
    BMC Bioinformatics 9:S9. 2008
    ..Pathway or gene ontology analysis can provide an alternative way to relax the significance threshold applied to single genes and may lead to a better biological interpretation...
  5. pmc Trends in modeling Biomedical Complex Systems
    Luciano Milanesi
    Institute of Biomedical Technology, National Research Council, Milan, Italy
    BMC Bioinformatics 10:I1. 2009
    ....
  6. ncbi request reprint Age-dependent effects of in vitro radiofrequency exposure (mobile phone) on CD95+ T helper human lymphocytes
    Miriam Capri
    CIG, Interdepartmental Center L Galvani, University of Bologna, Italy
    Ann N Y Acad Sci 1067:493-9. 2006
    ..This age-related result is noteworthy given the importance of a such molecule in regulation of the immune response...
  7. doi request reprint Molecular remodeling of potassium channels in fibroblasts from centenarians: a marker of longevity?
    Isabella Zironi
    Department of Physics, University of Bologna, 40127 Bologna, Italy
    Mech Ageing Dev 131:674-81. 2010
    ..The maintenance of "young" K(+) currents and the peculiar age-related remodeling of K(+) channel subtypes in centenarian's DF is likely associated with successful aging and might provide a predictive marker of longevity...
  8. doi request reprint Stochastic neutral modelling of the Gut Microbiota's relative species abundance from next generation sequencing data
    Claudia Sala
    Department of Physics and Astronomy, University of Bologna, Bologna, 40127, Italy
    BMC Bioinformatics 17:16. 2016
    ..relying on population dynamics and was proved to fit the coral-reefs and rain forests RSA. Our aim is to ascertain if this model also describes the Microbiota RSA and if it can help in explaining the Microbiota plasticity...
  9. ncbi request reprint 50 Hz sinusoidal magnetic fields do not affect human lymphocyte activation and proliferation in vitro
    Miriam Capri
    Department of Experimental Pathology, Via S Giacomo 12, University of Bologna, 40126 Bologna, Italy
    Phys Biol 1:211-9. 2004
    ..Thus, the conclusions are that two important functional phases of human lymphocytes, such as activation and proliferation, are not affected by exposures to 50 Hz magnetic fields similar to those found under power lines...
  10. doi request reprint ELF magnetic fields tuned to ion parametric resonance conditions do not affect TEA-sensitive voltage-dependent outward K(+) currents in a human neural cell line
    Entelë Gavoçi
    Department of Physics and Astronomy, University of Bologna, Bologna, Italy
    Bioelectromagnetics 34:579-88. 2013
    ..However, this is not a direct disprove of the hypothesis, which should be investigated on other ion channels and at single channel levels also...
  11. ncbi request reprint Genomic imbalances associated with secondary acute leukemias in Hodgkin lymphoma
    Gianluca Brusa
    Istituto di Ematologia e Oncologia Medica Lorenzo e Ariosto Serágnoli, Università di Bologna Medical School, 40138 Bologna, Italy
    Oncol Rep 18:1427-34. 2007
    ..Immunohistochemistry confirmed aCGH results and distinguished the distribution of either amplified or deleted gene products in neoplastic Reed Sternberg (RS) cells and non-neoplastic lymph node components...
  12. pmc Pooled genome-wide analysis to identify novel risk loci for pediatric allergic asthma
    Giampaolo Ricci
    Pediatric Unit, Department of Gynecologic, Obstetric and Pediatric Sciences, University of Bologna, Bologna, Italy
    PLoS ONE 6:e16912. 2011
    ..No such study was up to now applied to childhood allergic asthma, even if the very high complexity of asthma genetics is an appropriate field to explore the potential of pooled GWAS approach...
  13. ncbi request reprint Effects of 50 Hz sinusoidal magnetic fields on Hsp27, Hsp70, Hsp90 expression in porcine aortic endothelial cells (PAEC)
    Chiara Bernardini
    Department of Veterinary Morphophysiology and Animal Production DIMORFIPA, Bologna University, Via Tolara di Sopra 50, 40064 Ozzano dell Emilia, Bologna, Italy
    Bioelectromagnetics 28:231-7. 2007
    ..Analysis in situ by immunofluorescence revealed that ELF-MF exposure affected the cellular distribution of Hsp27; in particular a partial relocalization in the nucleus was observed...
  14. doi request reprint Statistical strategies and stochastic predictive models for the MARK-AGE data
    Enrico Giampieri
    Interdepartmental Center Galvani CIG, via Selmi, 3 University of Bologna, Bologna, Italy Physics and Astronomy Department, Viale Berti Pichat 6 2, University of Bologna, Bologna, Italy Electronic address
    Mech Ageing Dev 151:45-53. 2015
    ..We also include a description of the main techniques used, to explain and justify the selected strategies. Among other possibilities, we suggest to model and analyze the data with a three step strategy. ..
  15. pmc Network, degeneracy and bow tie. Integrating paradigms and architectures to grasp the complexity of the immune system
    Paolo Tieri
    Interdept, Center Luigi Galvani for Bioinformatics, Biophysics and Biocomplexity CIG, University of Bologna, Via F, Selmi 3, 40126 Bologna, Italy
    Theor Biol Med Model 7:32. 2010
    ..e. the capacity to turn an apparently chaotic and highly dynamic set of signals into functional information...
  16. ncbi request reprint Gene expression changes in human cells after exposure to mobile phone microwaves
    Daniel Remondini
    University of Bologna, Department of Physics, Bologna, Italy
    Proteomics 6:4745-54. 2006
    ..However, following microwave exposure, some but not all human cells might react with an increase in expression of genes encoding ribosomal proteins and therefore up-regulating the cellular metabolism...
  17. ncbi request reprint Role of connectivity in immune and neural network models: memory development and aging
    Daniel Remondini
    Dipartimento di Fisica, Universita di Bologna, Via Berti Pichat 6, 40127 Bologna, Italy
    Riv Biol 96:225-39. 2003
    ..Moreover, changes in connectivity may lead to changes in memory properties during development and aging...
  18. pmc Weighted multiplex networks
    Giulia Menichetti
    Department of Physics and Astronomy and INFN Sez Bologna, Bologna University, Bologna, Italy
    PLoS ONE 9:e97857. 2014
    ..Finally, we introduce a theoretical framework based on the entropy of multiplex ensembles to quantify the information stored in multiplex networks that would remain undetected if the single layers were analyzed in isolation. ..
  19. ncbi request reprint Correlations between weights and overlap in ensembles of weighted multiplex networks
    Giulia Menichetti
    Department of Physics and Astronomy and INFN Sez Bologna, Bologna University, Viale B Pichat 6 2 40127 Bologna, Italy
    Phys Rev E Stat Nonlin Soft Matter Phys 90:062817. 2014
    ..In order to provide a concrete example of how this framework apply to real data we consider a multiplex constructed from gene expression data of healthy and cancer tissues. ..
  20. ncbi request reprint Turning on stem cell cardiogenesis with extremely low frequency magnetic fields
    Carlo Ventura
    Laboratory of Molecular Biology and Stem Cell Engineering, National Institute of Biostructures and Biosystems, University of Bologna, Bologna, Italy
    FASEB J 19:155-7. 2005
    ....
  21. doi request reprint Lifelong maintenance of composition, function and cellular/subcellular distribution of proteasomes in human liver
    Elena Bellavista
    Interdepartmental Centre L Galvani for Integrated Studies on Biophysics, Bioinformatics and Biocomplexity CIG, Alma Mater Studiorum, University of Bologna, 40126 Bologna, Italy Department of Experimental, Diagnostic and Specialty Medicine DIMES, Alma Mater Studiorum, University of Bologna, 40126 Bologna, Italy Electronic address
    Mech Ageing Dev 141:26-34. 2014
    ..Gender differences are emerging and they deserve further investigations owing to the different aging trajectories between men and women. Finally, our data support the safe use of livers from old donors for transplantation. ..