David Martin

Summary

Country: France

Publications

  1. pmc GOToolBox: functional analysis of gene datasets based on Gene Ontology
    David Martin
    Laboratoire de Genetique et Physiologie du Developpement, IBDM, CNRS Inserm Université de la Méditerranée, Parc Scientifique de Luminy, Case 907, 13288 Marseille, France
    Genome Biol 5:R101. 2004
  2. pmc Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network
    Christine Brun
    Laboratoire de Genetique et Physiologie du Developpement, CNRS UMR6545, Parc Scientifique et Technologique de Luminy, Case 907, 13288 Marseille Cedex 9, France
    Genome Biol 5:R6. 2003
  3. ncbi [Prediction of transcription and genomic sequences]
    David Martin
    Laboratoire de Genetique et de Physiologie du Developpement, LGPD IBDM, CNRS, Case 907, Universite de la Mediterranee, Campus Scientifique de Luminy, 13288 Marseille 9, France
    Med Sci (Paris) 20:1036-40. 2004
  4. ncbi PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks
    Anais Baudot
    LGPD IBDM UMR6545 CNRS
    Bioinformatics 22:248-50. 2006
  5. ncbi Molecular biology of mosquito vitellogenesis: from basic studies to genetic engineering of antipathogen immunity
    Alexander S Raikhel
    Department of Entomology, University of California, Riverside, CA 92521 0314, USA
    Insect Biochem Mol Biol 32:1275-86. 2002
  6. ncbi Evaluation of annotation strategies using an entire genome sequence
    Ioannis Iliopoulos
    Computational Genomics Group, The European Bioinformatics Institute, EMBL Cambridge Outstation, Cambridge CB10 1SD, UK
    Bioinformatics 19:717-26. 2003
  7. ncbi Primary coronary angioplasty versus thrombolysis for acute myocardial infarction
    Iain Buchan
    Lancet 361:1304; author reply 1304-5. 2003
  8. ncbi BioSPICE: access to the most current computational tools for biologists
    Thomas D Garvey
    SRI International, Menlo Park, California 94025, USA
    OMICS 7:411-20. 2003

Collaborators

  • Bernard Jacq
  • François Chevenet
  • Jerome Wojcik
  • Patrick Poullet
  • Anais Baudot
  • C A Ouzounis
  • Denis Thieffry
  • A Valencia
  • I Rigoutsos
  • Iain Buchan
  • Ioannis Iliopoulos
  • Christine Brun
  • Thomas D Garvey
  • Alexander S Raikhel
  • Theodore Liakopoulos
  • Anton J Enright
  • Lee Hooper
  • Mark Johnson
  • Nick Freemantle
  • Christophe Leroy
  • Patrick McElduff
  • Giorgos Palaios
  • Patrick Lincoln
  • David Brett
  • Asutosh T Yagnik
  • Javier Tamames
  • Mark Carroll
  • Christian Blaschke
  • Damien Devos
  • Vassilis Promponas
  • Miguel A Andrade
  • Sophia Tsoka
  • Claude Pasquier
  • Charles John Pedersen
  • Stavros Hamodrakas
  • Anna Tramontano
  • Alain Guénoche
  • Chris Sander
  • Jinsong Zhu
  • GuoQiang Sun
  • Geoff Attardo
  • Chao Li
  • Abdoulaziz Ahmed
  • Neal Dittmer
  • Sheng Fu Wang
  • Vladimir A Kokoza

Detail Information

Publications8

  1. pmc GOToolBox: functional analysis of gene datasets based on Gene Ontology
    David Martin
    Laboratoire de Genetique et Physiologie du Developpement, IBDM, CNRS Inserm Université de la Méditerranée, Parc Scientifique de Luminy, Case 907, 13288 Marseille, France
    Genome Biol 5:R101. 2004
    ..GO annotations can also be constrained to a slim hierarchy or a given level of the ontology. The source codes are available upon request, and distributed under the GPL license...
  2. pmc Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network
    Christine Brun
    Laboratoire de Genetique et Physiologie du Developpement, CNRS UMR6545, Parc Scientifique et Technologique de Luminy, Case 907, 13288 Marseille Cedex 9, France
    Genome Biol 5:R6. 2003
    ....
  3. ncbi [Prediction of transcription and genomic sequences]
    David Martin
    Laboratoire de Genetique et de Physiologie du Developpement, LGPD IBDM, CNRS, Case 907, Universite de la Mediterranee, Campus Scientifique de Luminy, 13288 Marseille 9, France
    Med Sci (Paris) 20:1036-40. 2004
    ....
  4. ncbi PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks
    Anais Baudot
    LGPD IBDM UMR6545 CNRS
    Bioinformatics 22:248-50. 2006
    ....
  5. ncbi Molecular biology of mosquito vitellogenesis: from basic studies to genetic engineering of antipathogen immunity
    Alexander S Raikhel
    Department of Entomology, University of California, Riverside, CA 92521 0314, USA
    Insect Biochem Mol Biol 32:1275-86. 2002
    ..This research serves as the foundation for the future design of mosquito-specific expression cassettes with predicted stage- and tissue specificity at the desired levels of transgene expression...
  6. ncbi Evaluation of annotation strategies using an entire genome sequence
    Ioannis Iliopoulos
    Computational Genomics Group, The European Bioinformatics Institute, EMBL Cambridge Outstation, Cambridge CB10 1SD, UK
    Bioinformatics 19:717-26. 2003
    ..In order to quantify the accuracy and reproducibility of function assignments on a genome-wide scale, we have re-annotated the entire genome sequence of Chlamydia trachomatis (serovar D), in a collaborative manner...
  7. ncbi Primary coronary angioplasty versus thrombolysis for acute myocardial infarction
    Iain Buchan
    Lancet 361:1304; author reply 1304-5. 2003
  8. ncbi BioSPICE: access to the most current computational tools for biologists
    Thomas D Garvey
    SRI International, Menlo Park, California 94025, USA
    OMICS 7:411-20. 2003
    ..In addition to the BioSPICE software products, a project website supports information exchange and community building...