Claude Murat

Summary

Affiliation: Institut National de la Recherche Agronomique
Country: France

Publications

  1. doi request reprint Forty years of inoculating seedlings with truffle fungi: past and future perspectives
    Claude Murat
    UMR1136 INRA, Interactions Arbres Micro organismes, Laboratory of Excellence ARBRE, INRA Nancy, Université de Lorraine, 54280, Champenoux, France
    Mycorrhiza 25:77-81. 2015
  2. pmc The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown
    Anthony Levasseur
    INRA, UMR1163 Biotechnologie des Champignons Filamenteux, Aix Marseille Universite, Polytech Marseille, 163 Avenue de Luminy, CP 925, 13288 Marseille Cedex 09, France
    BMC Genomics 15:486. 2014
  3. doi request reprint Fine-scale spatial genetic structure of the black truffle (Tuber melanosporum) investigated with neutral microsatellites and functional mating type genes
    Claude Murat
    INRA, UMR 1136 INRA Université de Lorraine Interactions Arbres Microorganismes, Labex ARBRE, FR EFABA, Champenoux, France
    New Phytol 199:176-87. 2013
  4. doi request reprint Distribution and localization of microsatellites in the Perigord black truffle genome and identification of new molecular markers
    C Murat
    UMR INRA UHP Interactions Arbres Micro organismes, INRA Nancy, 54280 Champenoux, France
    Fungal Genet Biol 48:592-601. 2011
  5. doi request reprint Genomic suppression subtractive hybridization as a tool to identify differences in mycorrhizal fungal genomes
    Claude Murat
    Department of Plant Biology, Institute for Plant Protection CNR, University of Turin, UOS Turin, Turin, Italy
    FEMS Microbiol Lett 318:115-22. 2011
  6. ncbi request reprint Phylogenetic and populational study of the Tuber indicum complex
    Yongjin Wang
    INRA, Unité Mixte de Recherches 1136, INRA Université Henri Poincaré, Nancy I, Interactions Arbres Micro organismes, Centre INRA de Nancy, F 54210, Champenoux, France
    Mycol Res 110:1034-45. 2006
  7. doi request reprint Specific regions in the Sod1 locus of the ericoid mycorrhizal fungus Oidiodendron maius from metal-enriched soils show a different sequence polymorphism
    Marta Vallino
    Department of Plant Biology, University of Turin and IPP CNR, Turin, Italy
    FEMS Microbiol Ecol 75:321-31. 2011
  8. doi request reprint Cu,Zn superoxide dismutase and zinc stress in the metal-tolerant ericoid mycorrhizal fungus Oidiodendron maius Zn
    Marta Vallino
    Dipartimento di Biologia Vegetale dell Università di Torino and Istituto per la Protezione delle Piante del CNR, Turin, Italy
    FEMS Microbiol Lett 293:48-57. 2009
  9. pmc Characterization of transposable elements in the ectomycorrhizal fungus Laccaria bicolor
    Jessy Labbé
    Unité Mixte de Recherche de l Institut National de la Recherche Agronomique, Lorraine Université Interactions Arbres Microorganismes, Centre de Nancy, Champenoux, France
    PLoS ONE 7:e40197. 2012
  10. doi request reprint Genome-wide survey of repetitive DNA elements in the button mushroom Agaricus bisporus
    Marie Foulongne-Oriol
    INRA, UR1264 MycSA, F 33882 Villenave d Ornon, France
    Fungal Genet Biol 55:6-21. 2013

Detail Information

Publications22

  1. doi request reprint Forty years of inoculating seedlings with truffle fungi: past and future perspectives
    Claude Murat
    UMR1136 INRA, Interactions Arbres Micro organismes, Laboratory of Excellence ARBRE, INRA Nancy, Université de Lorraine, 54280, Champenoux, France
    Mycorrhiza 25:77-81. 2015
    ..Additionally, the history of seedlings inoculated with truffles, procedures currently used in France for seedling control quality, and a reflection on future research aimed at increasing truffle production will be presented...
  2. pmc The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown
    Anthony Levasseur
    INRA, UMR1163 Biotechnologie des Champignons Filamenteux, Aix Marseille Universite, Polytech Marseille, 163 Avenue de Luminy, CP 925, 13288 Marseille Cedex 09, France
    BMC Genomics 15:486. 2014
    ..The wood-decayer Pycnoporus cinnabarinus is a model fungus for the study of plant cell wall decomposition and is used for a number of applications in green and white biotechnology...
  3. doi request reprint Fine-scale spatial genetic structure of the black truffle (Tuber melanosporum) investigated with neutral microsatellites and functional mating type genes
    Claude Murat
    INRA, UMR 1136 INRA Université de Lorraine Interactions Arbres Microorganismes, Labex ARBRE, FR EFABA, Champenoux, France
    New Phytol 199:176-87. 2013
    ..Our findings suggest that competition occurs between genets and provide basic information on T. melanosporum propagation patterns that are relevant for the management of productive truffle orchards...
  4. doi request reprint Distribution and localization of microsatellites in the Perigord black truffle genome and identification of new molecular markers
    C Murat
    UMR INRA UHP Interactions Arbres Micro organismes, INRA Nancy, 54280 Champenoux, France
    Fungal Genet Biol 48:592-601. 2011
    ..melanosporum is a species with an important genetic diversity, which is in agreement with its recently uncovered heterothallic mating system...
  5. doi request reprint Genomic suppression subtractive hybridization as a tool to identify differences in mycorrhizal fungal genomes
    Claude Murat
    Department of Plant Biology, Institute for Plant Protection CNR, University of Turin, UOS Turin, Turin, Italy
    FEMS Microbiol Lett 318:115-22. 2011
    ..This approach is a quick and rather inexpensive tool to develop molecular markers for mycorrhizal fungi tracking and barcoding, to identify functional genes and to investigate the genome plasticity, adaptation and evolution...
  6. ncbi request reprint Phylogenetic and populational study of the Tuber indicum complex
    Yongjin Wang
    INRA, Unité Mixte de Recherches 1136, INRA Université Henri Poincaré, Nancy I, Interactions Arbres Micro organismes, Centre INRA de Nancy, F 54210, Champenoux, France
    Mycol Res 110:1034-45. 2006
    ..This study is the first to identify a genetic and phylogeographical structure within the Chinese Tuber species...
  7. doi request reprint Specific regions in the Sod1 locus of the ericoid mycorrhizal fungus Oidiodendron maius from metal-enriched soils show a different sequence polymorphism
    Marta Vallino
    Department of Plant Biology, University of Turin and IPP CNR, Turin, Italy
    FEMS Microbiol Ecol 75:321-31. 2011
    ....
  8. doi request reprint Cu,Zn superoxide dismutase and zinc stress in the metal-tolerant ericoid mycorrhizal fungus Oidiodendron maius Zn
    Marta Vallino
    Dipartimento di Biologia Vegetale dell Università di Torino and Istituto per la Protezione delle Piante del CNR, Turin, Italy
    FEMS Microbiol Lett 293:48-57. 2009
    ..This may be of particular interest from the perspective of using mycorrhizal fungi in bioremediation programmes...
  9. pmc Characterization of transposable elements in the ectomycorrhizal fungus Laccaria bicolor
    Jessy Labbé
    Unité Mixte de Recherche de l Institut National de la Recherche Agronomique, Lorraine Université Interactions Arbres Microorganismes, Centre de Nancy, Champenoux, France
    PLoS ONE 7:e40197. 2012
    ..Using a TE-specific annotation pipeline we have characterized and analyzed TEs in the L. bicolor S238N-H82 genome...
  10. doi request reprint Genome-wide survey of repetitive DNA elements in the button mushroom Agaricus bisporus
    Marie Foulongne-Oriol
    INRA, UR1264 MycSA, F 33882 Villenave d Ornon, France
    Fungal Genet Biol 55:6-21. 2013
    ..Beyond their role in genome structure, repeats provide a virtually endless source of molecular markers useful for genetic studies in this cultivated species...
  11. doi request reprint Survey and analysis of simple sequence repeats in the Laccaria bicolor genome, with development of microsatellite markers
    Jessy Labbé
    UMR 1136, INRA Nancy Université, Interactions Arbres Microorganismes, INRA Nancy, 54280, Champenoux, France
    Curr Genet 57:75-88. 2011
    ..Unlike previously developed microsatellite markers, these new ones are spread throughout the genome; these markers could have immediate applications in population genetics...
  12. pmc Obligate biotrophy features unraveled by the genomic analysis of rust fungi
    Sebastien Duplessis
    Unité Mixte de Recherche 1136, Institut National de la Recherche Agronomique Nancy Université, Interactions Arbres Micro organismes, Centre de Nancy, 54280 Champenoux, France
    Proc Natl Acad Sci U S A 108:9166-71. 2011
    ..Some of these genomic hallmarks are mirrored in the genomes of other microbial eukaryotes that have independently evolved to infect plants, indicating convergent adaptation to a biotrophic existence inside plant cells...
  13. doi request reprint Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
    Annegret Kohler
    1 Institut National de la Recherche Agronomique INRA, Laboratory of Excellence Advanced Research on the Biology of Tree and Forest Ecosystems ARBRE, UMR 1136, Champenoux, France 2 University of Lorraine, Laboratory of Excellence ARBRE, UMR 1136, Champenoux, France
    Nat Genet 47:410-5. 2015
    ..Convergent evolution of the mycorrhizal habit in fungi occurred via the repeated evolution of a 'symbiosis toolkit', with reduced numbers of PCWDEs and lineage-specific suites of mycorrhiza-induced genes. ..
  14. doi request reprint Gene expression in mycorrhizal orchid protocorms suggests a friendly plant-fungus relationship
    Silvia Perotto
    Department of Life Sciences and Systems Biology, University of Turin, Viale Mattioli 25, 10125, Turin, Italy
    Planta 239:1337-49. 2014
    ..Two genes coding for mannose-binding lectins were significantly up-regulated in the presence of the mycorrhizal fungus, but their role in the symbiosis is unclear...
  15. pmc Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis
    Emilie Tisserant
    Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1136, Interactions Arbres Microorganismes, Centre de Nancy, Université de Lorraine, 54280 Champenoux, France
    Proc Natl Acad Sci U S A 110:20117-22. 2013
    ..A battery of mycorrhiza-induced secreted proteins is expressed in symbiotic tissues. The present comprehensive repertoire of R. irregularis genes provides a basis for future research on symbiosis-related mechanisms in Glomeromycota. ..
  16. doi request reprint Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis
    Francis Martin
    INRA, UMR 1136, INRA Nancy Université, Interactions Arbres Microorganismes, 54280 Champenoux, France
    Nature 464:1033-8. 2010
    ..bicolor and T. melanosporum, but the comparison of genomic traits in the two ectomycorrhizal fungi showed that genetic predispositions for symbiosis-'the symbiosis toolbox'-evolved along different ways in ascomycetes and basidiomycetes...
  17. doi request reprint A survey of genome-wide single nucleotide polymorphisms through genome resequencing in the Périgord black truffle (Tuber melanosporum Vittad.)
    Thibaut Payen
    INRA, Laboratoire d Excellence ARBRE, UMR1136 Interactions Arbres Microorganismes, F 54280, Champenoux, France
    Mol Ecol Resour 15:1243-55. 2015
    ..The SNPs identified represent a valuable resource for future population genetics and genomics studies. ..
  18. ncbi request reprint Phylogenetic relationships between Tuber pseudoexcavatum, a Chinese truffle, and other Tuber species based on parsimony and distance analysis of four different gene sequences
    Yongjin Wang
    INRA, UMR 1136, INRA Université Henri Poincaré, Nancy I, Interactions Arbres Micro organismes, Centre INRA de Nancy, Champenoux, France
    FEMS Microbiol Lett 259:269-81. 2006
    ..pseudoexcavatum towards China. Later the T. melanosporum subclade would have started to migrate through the same route, T. melanosporum towards Europe and T. indicum towards China, leading to vicariant species...
  19. doi request reprint Identification and In Situ Distribution of a Fungal Gene Marker: The Mating Type Genes of the Black Truffle
    Herminia de la Varga
    UMR1136 INRA University of Lorraine Tree Microbe Interactions IAM, Labex ARBRE, Champenoux, France
    Methods Mol Biol 1399:141-9. 2016
    ....
  20. doi request reprint Climatic variations explain annual fluctuations in French Périgord black truffle wholesale markets but do not explain the decrease in black truffle production over the last 48 years
    François Le Tacon
    UMR 1136, Interactions Arbres Microorganismes IAM, Labex ARBRE INRA, 54280, Champenoux, France
    Mycorrhiza 24:S115-25. 2014
    ..The stability of production or the slight increase observed during the last 25 years could reflect the input of truffle orchards recently planted...
  21. doi request reprint Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil
    Stephane Uroz
    INRA, UMR1136 INRA Nancy Université Interactions Arbres Microorganismes, IFR 110, Centre INRA de Nancy, 54280 Champenoux, France
    Environ Microbiol Rep 2:281-8. 2010
    ..This work increases our understanding of the niche effect on bacterial diversity and on the rare phylogenetic groups inhabiting the soil...
  22. pmc Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche
    Emmanuelle Morin
    Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1136 Université Henri Poincaré, Interactions Arbres Micro organismes, 54280 Champenoux, France
    Proc Natl Acad Sci U S A 109:17501-6. 2012
    ..Genome sequence will expedite mushroom breeding for improved agronomic characteristics...