Ana Paula Oliveira
Affiliation: Technical University of Denmark
- Modeling Lactococcus lactis using a genome-scale flux modelAna Paula Oliveira
Fluxome Sciences A S, Søltofts Plads, Building 223, DK 2800 Kgs Lyngby, Denmark
BMC Microbiol 5:39. 2005..Flux balance analysis (FBA) and minimization of metabolic adjustment (MOMA) were used as modeling frameworks...
- Architecture of transcriptional regulatory circuits is knitted over the topology of bio-molecular interaction networksAna Paula Oliveira
Center for Microbial Biotechnology, Department of Systems Biology, Technical University of Denmark, Building 223, DK 2800 Kgs, Lyngby, Denmark
BMC Syst Biol 2:17. 2008..Such approaches systematically integrate the existing biological knowledge with the 'omics' data...
- Metabolic network driven analysis of genome-wide transcription data from Aspergillus nidulansHelga David
Fluxome Sciences A S, Diplomvej, DK 2800 Kgs, Lyngby, Denmark
Genome Biol 7:R108. 2006..CONCLUSION: Our analysis indicates that some of the genes are regulated by common transcription factors, making it possible to establish new putative links between known transcription factors and genes through clustering...