D James

Summary

Affiliation: Canadian Food Inspection Agency
Country: Canada

Publications

  1. ncbi request reprint Analysis of the complete genome of peach chlorotic mottle virus: identification of non-AUG start codons, in vitro coat protein expression, and elucidation of serological cross-reactions
    D James
    Centre for Plant Health, Research Section, Sidney Laboratory, Canadian Food Inspection Agency, Sidney, British Columbia, Canada
    Arch Virol 152:2207-15. 2007
  2. ncbi request reprint Nucleotide sequence analysis of Plum pox virus isolate W3174: evidence of a new strain
    D James
    Sidney Laboratory, Canadian Food Inspection Agency, 8801 East Saanich Road, Sidney, BC, Canada V8L 1H3
    Virus Res 110:143-50. 2005
  3. doi request reprint Identification and complete genome analysis of a virus variant or putative new foveavirus associated with apple green crinkle disease
    D James
    Centre for Plant Health Sidney Laboratory, Canadian Food Inspection Agency, 8801 East Saanich Road, Sidney, BC, V8L 1H3, Canada
    Arch Virol 158:1877-87. 2013
  4. ncbi request reprint Single primer pair designs that facilitate simultaneous detection and differentiation of peach mosaic virus and cherry mottle leaf virus
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, BC
    J Virol Methods 83:103-11. 1999
  5. doi request reprint Sequence analysis of RNA 2 and RNA 3 of lilac leaf chlorosis virus: a putative new member of the genus Ilarvirus
    D James
    Sidney Laboratory, Centre for Plant Health, Canadian Food Inspection Agency, 8801 East Saanich Road, Sidney, BC, Canada
    Arch Virol 155:993-8. 2010
  6. doi request reprint Sequence analysis of RNA 1 of lilac leaf chlorosis virus supports a close relationship to subgroup 3 ilarviruses
    D James
    Sidney Laboratory, Centre for Plant Health, Canadian Food Inspection Agency, Sidney, BC V8L 1H3, Canada
    Arch Virol 157:203-6. 2012
  7. ncbi request reprint Genome segment RNA-1 of a flat apple isolate of Cherry rasp leaf virus: nucleotide sequence analysis and RT-PCR detection
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, Canada
    Arch Virol 150:1469-76. 2005
  8. ncbi request reprint Nucleotide sequence and genome organisation of cherry mottle leaf virus and its relationship to members of the Trichovirus genus
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, Britsh Columbia, Canada
    Arch Virol 145:995-1007. 2000
  9. ncbi request reprint A simple and reliable protocol for the detection of apple stem grooving virus by RT-PCR and in a multiplex PCR assay
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, BC
    J Virol Methods 83:1-9. 1999
  10. ncbi request reprint The complete genome sequence of an El Amar isolate of plum pox virus (PPV) and its phylogenetic relationship to other PPV strains
    A Myrta
    Istituto Agronomico Mediterraneo, Bari, Italy
    Arch Virol 151:1189-98. 2006

Collaborators

  • C Upton
  • W Jelkmann
  • M Navratil
  • D P Martin
  • A Myrta
  • M R Davis
  • E P Rybicki
  • W H Schnippenkoetter
  • J A Willment
  • A Varga
  • A Sanchez
  • L Nagarajan
  • C Oley
  • C R Muller
  • K North
  • A Colley
  • R Quinlivan
  • P Tomlinson
  • A Bankier
  • F Muntoni
  • T Kuntzer
  • J Dixon
  • C Sewry
  • N G Laing
  • A Gedeon
  • H Jungbluth
  • P Walsh
  • P Lamont
  • E Haan
  • J Njuguna
  • M Fyvie
  • B Odhiambo
  • R Velders
  • M B von Wechmar
  • F L Hughes
  • R Billharz

Detail Information

Publications13

  1. ncbi request reprint Analysis of the complete genome of peach chlorotic mottle virus: identification of non-AUG start codons, in vitro coat protein expression, and elucidation of serological cross-reactions
    D James
    Centre for Plant Health, Research Section, Sidney Laboratory, Canadian Food Inspection Agency, Sidney, British Columbia, Canada
    Arch Virol 152:2207-15. 2007
    ..No significant common linear epitopes were associated with PPV. Extensive phylogenetic analysis indicates that PCMV is closely related to ASPV and is a new and distinct member of the genus Foveavirus...
  2. ncbi request reprint Nucleotide sequence analysis of Plum pox virus isolate W3174: evidence of a new strain
    D James
    Sidney Laboratory, Canadian Food Inspection Agency, 8801 East Saanich Road, Sidney, BC, Canada V8L 1H3
    Virus Res 110:143-50. 2005
    ..These results are consistent with serological and nucleic acid-based strain typing data and justify recognition of this isolate as representative of a new strain identified as PPV-W...
  3. doi request reprint Identification and complete genome analysis of a virus variant or putative new foveavirus associated with apple green crinkle disease
    D James
    Centre for Plant Health Sidney Laboratory, Canadian Food Inspection Agency, 8801 East Saanich Road, Sidney, BC, V8L 1H3, Canada
    Arch Virol 158:1877-87. 2013
    ..AGCaV may be a variant or strain of ASPV with unique biological properties, but there is evidence that it may be a distinct putative foveavirus. ..
  4. ncbi request reprint Single primer pair designs that facilitate simultaneous detection and differentiation of peach mosaic virus and cherry mottle leaf virus
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, BC
    J Virol Methods 83:103-11. 1999
    ..The PMV primer pair reliably detected all isolates of PMV tested by RT-PCR analysis, both in peach leaf and budwood tissue...
  5. doi request reprint Sequence analysis of RNA 2 and RNA 3 of lilac leaf chlorosis virus: a putative new member of the genus Ilarvirus
    D James
    Sidney Laboratory, Centre for Plant Health, Canadian Food Inspection Agency, 8801 East Saanich Road, Sidney, BC, Canada
    Arch Virol 155:993-8. 2010
    ..37 kDa). The genome organization is similar to that typical for members of the genus Ilarvirus. Phylogenetic analyses indicate a close evolutionary relationship between LLCV, ApMV, and PNRSV...
  6. doi request reprint Sequence analysis of RNA 1 of lilac leaf chlorosis virus supports a close relationship to subgroup 3 ilarviruses
    D James
    Sidney Laboratory, Centre for Plant Health, Canadian Food Inspection Agency, Sidney, BC V8L 1H3, Canada
    Arch Virol 157:203-6. 2012
    ..A conserved 41-nt region was identified at the distal end of the 3'UTR of all three genomic fragments of LLCV, with hairpin structures that may constitute putative coat protein binding sites...
  7. ncbi request reprint Genome segment RNA-1 of a flat apple isolate of Cherry rasp leaf virus: nucleotide sequence analysis and RT-PCR detection
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, Canada
    Arch Virol 150:1469-76. 2005
    ..RT-PCR targeting CRLV-FA RNA-1 appear to be of similar sensitivity and just as reliable as RT-PCR targeting RNA-2...
  8. ncbi request reprint Nucleotide sequence and genome organisation of cherry mottle leaf virus and its relationship to members of the Trichovirus genus
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, Britsh Columbia, Canada
    Arch Virol 145:995-1007. 2000
    ..CMLV appears to be a member of the Trichovirus genus...
  9. ncbi request reprint A simple and reliable protocol for the detection of apple stem grooving virus by RT-PCR and in a multiplex PCR assay
    D James
    Centre for Plant Health, Canadian Food Inspection Agency, Sidney, BC
    J Virol Methods 83:1-9. 1999
    ..TC/RT-PCR facilitated the simultaneous detection (multiplex PCR) of ASGV and cherry mottle leaf virus...
  10. ncbi request reprint The complete genome sequence of an El Amar isolate of plum pox virus (PPV) and its phylogenetic relationship to other PPV strains
    A Myrta
    Istituto Agronomico Mediterraneo, Bari, Italy
    Arch Virol 151:1189-98. 2006
    ..No significant recombination signals were identified using PhylPro and SimPlot scans of the PPV EA sequence, however an interesting recombination signal was identified in the P1/HC-Pro region of PPV W3174...
  11. ncbi request reprint The relative infectivities and genomic characterisation of three distinct mastreviruses from South Africa
    W H Schnippenkoetter
    Department of Microbiology, University of Cape Town, Rondebosch, Western Cape, South Africa
    Arch Virol 146:1075-88. 2001
    ..In the case of MSV-Set, this is the most distantly related MSV strain yet characterised...
  12. ncbi request reprint Principal mutation hotspot for central core disease and related myopathies in the C-terminal transmembrane region of the RYR1 gene
    M R Davis
    Department of Anatomical Pathology, Royal Perth Hospital, Wellington Street, 6000, Western Australia, Perth, Australia
    Neuromuscul Disord 13:151-7. 2003
    ....
  13. ncbi request reprint Sequence diversity and virulence in Zea mays of Maize streak virus isolates
    D P Martin
    Department of Moleculare Cell Biology, University of Cape Town, Cape Town, South Africa, 7701
    Virology 288:247-55. 2001
    ..Evidence is presented that certain of the isolates investigated may be the products of either intra- or interspecific recombination...