Genomes and Genes
Summary: A family of gram-negative bacteria usually found in soil or water and including many plant pathogens and a few animal pathogens.
Publications120 found, 100 shown here
- Siderophores of the Pseudomonadaceae sensu stricto (fluorescent and non-fluorescent Pseudomonas spp.)H Budzikiewicz
, , Germany
Fortschr Chem Org Naturst 87:81-237. 2004
- Amplified ribosomal DNA restriction analysis for the characterization of Azotobacteraceae: a contribution to the study of these free-living nitrogen-fixing bacteriaLucia Aquilanti
Dipartimento di Scienze degli Alimenti, Universita Politecnica delle Marche, Via Brecce Bianche, 60131 Ancona, Italy
J Microbiol Methods 57:197-206. 2004..Cluster analysis was successfully employed for the identification of members of the family Azotobacteraceae, being assignation into species of the isolates confirmed by means of partial 16S rRNA gene sequencing...
- Isolation and characterization of soybean-associated bacteria and their potential for plant growth promotionJúlia Kuklinsky-Sobral
Departamento de Genetica, Escola Superior de Agricultura Luiz de Queiroz, Universidade de Sao Paulo, PO Box 83, 13400 970 Piracicaba, Sao Paulo, Brazil
Environ Microbiol 6:1244-51. 2004..The soybean-associated bacteria showing characteristics related to plant growth promotion were identified as belonging to the genera Pseudomonas, Ralstonia, Enterobacter, Pantoea and Acinetobacter...
- Pseudomonads associated with midrib rot and soft rot of butterhead lettuce and endiveB Cottyn
Department of Crop Protection, Agricultural Research Centre Burg Van Gansberghelaan 96, BE 9820 Merelbeke, Belgium
Commun Agric Appl Biol Sci 70:101-9. 2005..Fluorescent pseudomonads with phenotype HR+ were consistently isolated from typical dark midrib rot symptoms, and selected isolates reproduced the typical midrib rot symptoms when spray-inoculated onto healthy lettuce plants...
- Ecological and physiological analyses of Pseudomonad species within a phenol remediation systemA S Whiteley
Molecular Microbial Ecology Laboratory, Natural Environment Research Council, Centre for Ecology and Hydrology-Oxford, Mansfield Road, Oxford, OX1 3SR, UK
J Microbiol Methods 44:79-88. 2001....
- A set of positively regulated flagellar gene promoters in Caulobacter crescentus with sequence homology to the nif gene promoters of Klebsiella pneumoniaeD Mullin
Department of Molecular Biology, Princeton University, NJ 08544
J Mol Biol 195:939-43. 1987..We speculate that the conserved sequence elements mapping at -13, -24 and -100 are cis-acting regulatory elements required for the transcription and periodic regulation of these fla genes in the C. crescentus cell cycle...
- Oleispira antarctica gen. nov., sp. nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea waterMichail M Yakimov
Istituto Sperimentale Talassografico, CNR, Spianata San Raineri 86, 98122 Messina, Italy
Int J Syst Evol Microbiol 53:779-85. 2003..nov., sp. nov.; strain RB-8(T) (= DSM 14852(T) = LMG 21398(T)) is the type strain...
- Isolation and characterization of novel bacteria degrading polycyclic aromatic hydrocarbons from polluted Greek soilsHaimou Zhang
Sector of Organic Chemistry and Biochemistry, Department of Chemistry, University of Ioannina, 45110 Ioannina, Greece
Appl Microbiol Biotechnol 65:124-31. 2004..This is the first report of a representative of the genus Paracoccus capable of degrading PAHs with such versatility. These three strains may be useful for bioremediation applications...
- The pinyon rhizosphere, plant stress, and herbivory affect the abundance of microbial decomposers in soilsC R Kuske
Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545, USA
Microb Ecol 45:340-52. 2003..Although all four groups were present in all the environments, the four microbial groups were affected differently by the pinyon rhizosphere, by tree age, and by tree stress caused by the cinder soil and insect herbivory...
- Combined effect of freeze chilling and MAP on quality parameters of raw chicken filletsA Patsias
Laboratory of Food Chemistry and Microbiology, Department of Chemistry, University of Ioannina, Ioannina 45110, Greece
Food Microbiol 25:575-81. 2008..MAP in combination with freeze chilling had a negligible effect on product quality...
- Growth and survival of immature Heamatobia irritans (Diptera; Muscidae) is influenced by bacterial isolated from cattle manure and conspecific larvaeM A Perotti
Research Centre, Agriculture, Lethbridge, AB, Canada
J Med Entomol 38:180-7. 2001..Bacteria in manure belonged to the Bacillaceae, Pseudomonadaceae, Micrococcaceae, Corynebacteriaceae, Enterobacteriaceae, Microbacteriaceae, and two unassigned genera...
- Use of Etests with carbapenems for Gram-negative rods producing beta-lactamasesBekir S Kocazeybek
Cerrahpasa Medical Faculty, Microbiology and Clinical Microbiology Department, University of Istanbul, Cerrahpasa, Istanbul, Turkey
Int J Antimicrob Agents 19:159-62. 2002..The imipenem and meropenem sensitivities of Klebsiella spp. were 98.4 and 100%, respectively, but imipenem resistance (21.6%) in Pseudomonas aeruginosa strains was higher than that of meropenem (10.8%)...
- Resistance-pattern-analysis--a step toward predictable differentiated antibiotic therapyW Fegeler
Institute of Medical Microbiology,
Zentralbl Bakteriol Mikrobiol Hyg A 270:153-9. 1988..In comparison to gentamicin, aztreonam showed the best results against Pseudomonadaceae. Using common combinations of antibiotics for the initial interventive therapy the possible use of RPA for a ..
- Inhibition of Salmonella enterica by plant-associated pseudomonads in vitro and on sprouting alfalfa seedWilliam F Fett
Food Safety Intervention Technologies Research Unit, Eastern Regional Research Center, Agricultural Research Service, US Department of Agriculture, Wyndmoor, Pennsylvania 19038, USA
J Food Prot 69:719-28. 2006..Time course studies indicated that S. enterica outgrowth was controlled on days 1 through 6 of sprouting. Competitive exclusion as a potential food safety intervention for seed sprouts merits further study...
- Extracellular chitinases of fluorescent pseudomonads antifungal to Fusarium oxysporum f. sp. dianthi causing carnation wiltNaosekpam Singh Ajit
Floriculture Division, Institute of Himalayan Bioresource Technology, Palampur, 176061, Himachal Pradesh, India
Curr Microbiol 52:310-6. 2006..The foregoing studies clearly established the significance of chitinases in the antagonism of fluorescent pseudomonads, showing avenues for possible exploitation in carnation wilt management...
- Competitive hybridization on spotted microarrays as a tool to conduct comparative genomic analyses of Xylella fastidiosa strainsRegina Costa de Oliveira
Núcleo Integrado de Biotecnologia, Universidade de Mogi das Cruzes, SP, Brazil
FEMS Microbiol Lett 216:15-21. 2002..This validation will enable the use of microarray-based comparisons across a wide variety of microorganisms..
- The modular architecture of Cellvibrio japonicus mannanases in glycoside hydrolase families 5 and 26 points to differences in their role in mannan degradationDeborah Hogg
School of Cell and Molecular Biosciences, University of Newcastle upon Tyne, Newcastle upon Tyne NE1 7RU, UK
Biochem J 371:1027-43. 2003....
- Conservation of the gene for outer membrane protein OprF in the family Pseudomonadaceae: sequence of the Pseudomonas syringae oprF geneC A Ullstrom
Department of Microbiology, University of British Columbia, Vancouver, Canada
J Bacteriol 173:768-75. 1991..Southern probing of PstI chromosomal digests of 14 species from the family Pseudomonadaceae revealed that only the nine members of rRNA homology group I hybridized with the oprF gene...
- Characterization of insertions of IS476 and two newly identified insertion sequences, IS1478 and IS1479, in Xanthomonas campestris pv. campestrisJ H Chen
Institute of Molecular Biology, National Chung Hsing University, Taichung 40227, Taiwan, Republic of China
J Bacteriol 181:1220-8. 1999..The results of Southern blot hybridization analysis indicated that multiple copies of IS476, IS1478, and IS1479 are present in the genomes of all seven X. campestris pv. campestris strains tested and several X. campestris pathovars...
- Specificity of the Pseudomonas aeruginosa PAO1 lipoprotein I gene as a DNA probe and PCR target region within the PseudomonadaceaeA Saint-Onge
Molecular Genetics Section, Biotechnology Research Institute, Montreal, Quebec, Canada
J Gen Microbiol 138:733-41. 1992..assessed against bacterial colonies by PCR or against purified genomic DNA by Southern blot analysis, using a number of representative strains within the Pseudomonadaceae. The oprI gene was found to be well conserved within RNA group I.
- Characterization of an insertion sequence, IS12528, from Gluconobacter suboxydansK Kondo
Department of Biotechnology, Graduate School of Agriculture and Life Sciences, University of Tokyo, Japan
Appl Environ Microbiol 63:1139-42. 1997..These observations suggest that IS12528 is one of the insertion sequences that are responsible for genetic instability leading to deficiencies in various physiological properties in a variety of acetic acid bacteria...
- Characterization of the genes encoding the three-component membrane-bound alcohol dehydrogenase from Gluconobacter suboxydans and their expression in Acetobacter pasteurianusK Kondo
Department of Biotechnology, Graduate School of Agriculture and Life Sciences, University of Tokyo, Japan
Appl Environ Microbiol 63:1131-8. 1997..suboxydans is not essential for ADH activity in A. pasteurianus, in contrast to the essential role of A. pasteurianus AdhS, which is required for correct assembly of the dehydrogenase and cytochrome c subunits on the membrane...
- Bacterial propagation in reusable water reservoirs in a humidified oxygen supply systemNobuharu Kobayashi
Department of Microbiology, Saitama Medical School, Saitama, Japan
J Infect Chemother 12:160-2. 2006..These results suggest that it is not recommended to maintain these water reservoirs by the conventional procedure...
- Isolation and identification of bacteria associated with adult laboratory Mexican fruit flies, Anastrepha ludens (Diptera: Tephritidae)L V Kuzina
Department of Entomology, University of California Riverside, Riverside, CA 92521, USA
Curr Microbiol 42:290-4. 2001..we identified a total of 18 different bacterial species belonging to the family Enterobacteriaceae, Pseudomonadaceae, Vibrionaceae, Micrococcaceae, Deinococcacea, Bacillaceae, and the genus Listeria...
- Legionella and other gram-negative bacteria in potable water from various rural and urban sourcesNimfa Stojek
Department of Occupational Biohazards, Institute of Agricultural Medicine, Jaczewskiego 2, 20 090 Lublin, Poland
Ann Agric Environ Med 13:323-35. 2006..Enterobacter spp., Klebsiella spp., Serratia spp., and Pantoea agglomerans were most common among GNB-E, while Acinetobacter spp. and species of Pseudomonadaceae family predominated among GNB-NE.
- Diverse tetracycline resistant bacteria and resistance genes from coastal waters of Jiaozhou BayHongyue Dang
Key Laboratory of Marine Geology and Environment, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, People s Republic of China
Microb Ecol 55:237-46. 2008..Enterobacteriaceae, Pseudomonadaceae, and Vibrionaceae constituted the majority of the typical resistant isolates...
- Gram-negative bacteria in water distribution systems of hospitalsNimfa Maria Stojek
Department of Occupational Biohazards, Institute of Agricultural Medicine, Jaczewskiego 2, 20 090 Lublin, Poland
Ann Agric Environ Med 15:135-42. 2008..1% of the water samples taken in hospitals in the concentrations 11-300 cfu/100 ml. Species of the family Pseudomonadaceae predominated among GNB-NE strains isolated from the examined water samples, forming on average 71...
- Legionella waterline colonization: detection of Legionella species in domestic, hotel and hospital hot water systemsE Leoni
Department of Medicine and Public Health, University of Bologna, Bologna, Italy
J Appl Microbiol 98:373-9. 2005..in the city of Bologna (Italy) and their possible association with bacterial contamination (total counts and Pseudomonadaceae) and the chemical characteristics of the water (pH, Ca, Mg, Fe, Mn, Cu, Zn and Total Organic Carbon, TOC).
- Matrix-assisted laser desorption ionization time-of-flight mass spectrometry identifies 90% of bacteria directly from blood culture vialsW Moussaoui
Institute of Bacteriology, Universite de Strasbourg, Hopitaux Universitaires de Strasbourg, France
Clin Microbiol Infect 16:1631-8. 2010..15% of all species found, Staphylococaceae 37.96%, Streptococaceae and Enterococaceae 20.85%, Pseudomonadaceae 1.69%, and anaerobes 2.44%...
- Acclimated biomass that degrades Sulfonated Naphthalene Formaldehyde CondensateJihane Cheriaa
Laboratory of Analysis, Treatment, Valorization and Environmental Pollution and Products, Department of Microbiology, Faculty of Pharmacy, Monastir, Tunisia
Pak J Biol Sci 11:1588-93. 2008..species community that was able to degrade SNFC consisted of aerobic Gram-negative rods belonging to the Pseudomonadaceae family...
- Identification of genes regulated by the MvaT-like paralogues TurA and TurB of Pseudomonas putida KT2440Francesco Renzi
Department of Biomolecular Sciences and Biotechnology, Universita degli Studi di Milano, Milan, Italy
Environ Microbiol 12:254-63. 2010..belong to groups I and II, respectively, both containing orthologous MvaT proteins that are present in all Pseudomonadaceae species...
- Exposure to airborne microorganisms, dust and endotoxin during processing of valerian roots on farmsCzesława Skórska
Department of Occupational Biohazards, Institute of Agricultural Medicine, Jaczewskiego 2, 20 090 Lublin, Poland
Ann Agric Environ Med 12:119-26. 2005..washed roots until shaking in the drying room, the most numerous were Gram-negative bacteria of the family Pseudomonadaceae (mostly Stenotrophomonas maltophilia, Pseudomonas chlororaphis and Pseudomonas fluorescens)...
- Development of a P1 phagemid system for the delivery of DNA into Gram-negative bacteriaCaroline Westwater
Department of Microbiology and Immunology, Medical University of South Carolina, 173 Ashley Avenue BSB 201, Charleston, SC 29403, USA
Microbiology 148:943-50. 2002..coli, Shigella flexneri, Shigella dysenteriae, Klebsiella pneumoniae and Citrobacter freundii) and Pseudomonadaceae (Pseudomonas aeruginosa)...
- Characterization of cell lysis in Pseudomonas putida induced upon expression of heterologous killing genesM C Ronchel
Department of Biochemistry and Molecular and Cellular Biology of Plants, Estacion Experimental del Zaidin, Consejo Superior de Investigaciones Cientificas, Granada, Spain
Appl Environ Microbiol 64:4904-11. 1998..These systems are of interest for the Pseudomonadaceae because of the potential applications of these microbes as bioremediation agents and biopesticides...
- The effects of circumcision on the penis microbiomeLance B Price
Translational Genomics Research Institute TGen, Flagstaff, Arizona, United States of America
PLoS ONE 5:e8422. 2010..Circumcision is associated with significant reductions in HIV, HSV-2 and HPV infections among men and significant reductions in bacterial vaginosis among their female partners...
- Systemic diseases in association with microbial species in oral biofilm from elderly requiring careH Senpuku
Department of Bacteriology, National Institute of Infectious Disease, Tokyo, Japan
Gerontology 49:301-9. 2003..It is understood that aging, tooth eruption, hormonal changes, active disease, oral hygiene, and other factors have an influence on biofilm formation and bacterial accumulation in the oral cavity...
- Halogenated metabolites from the new Okinawan red alga Laurencia yonaguniensisYoshinori Takahashi
Division of Material Science, Graduate School of Environmental Earth Science, Hokkaido University, Sapporo 060 0810, Japan
J Nat Prod 65:395-8. 2002..Neoirietetraol (1) was toxic to the brine shrimp (Altemia salina; LC50, 40.1 microM) and also showed weak antibacterial activities against two marine bacteria, Alcaligenes aquamarinus and Escherichia coli...
- Community analysis of chronic wound bacteria using 16S rRNA gene-based pyrosequencing: impact of diabetes and antibiotics on chronic wound microbiotaLance B Price
Translational Genomics Research Institute, Flagstaff, Arizona, United States of America
PLoS ONE 4:e6462. 2009..We characterized wound bacteria from a cohort of chronic wound patients using a 16S rRNA gene-based pyrosequencing approach and assessed the impact of diabetes and antibiotics on chronic wound microbiota...
- Acute mastoiditis in children: epidemiologic, clinical, microbiologic, and therapeutic aspects over past yearsM Nussinovitch
Department of Pediatrics C, Schneider Children's Medical Center of Israel, Petah Tikva and Sackler School of Medicine, Tel Aviv University, Israel
Clin Pediatr (Phila) 43:261-7. 2004..2% isolation rate). Pseudomonas aeruginosa and Streptococcus pneumoniae were the most frequently isolated agents. This review showed a significant increase (150%) in the number of patients with acute mastoiditis...
- [Computer analysis of regulating metabolism of glycerol-3-phosphate in proteobacteria genome]L V Danilova
Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, 101447 Russia
Mol Biol (Mosk) 37:843-9. 2003..consensus sequences being TGTTCGATAACGAACA for Enterobacteriaceae, wTTTTCGTATACGAAAAw for Pseudomonadaceae, and AATGCTCGATCGAGCATT for Vibrionaceae...
- Comparison of bioassays by testing whole soil and their water extract from contaminated sitesLaura Leitgib
Budapest University of Technology and Economics, Department of Agricultural Chemical Technology, Budapest, Szt Gellért tér 4 H 1111, Hungary
Chemosphere 66:428-34. 2007..The direct contact environmental toxicity tests are able to meet the requirements of environmental toxicology: reliability, sensibility, reproducibility, rapidity and low cost...
- Determination of the inflammatory potential of bioaerosols from a duck-fattening unit by using a limulus amebocyte lysate assay and human whole blood cytokine responseB A Zucker
Institute of Animal and Environmental Hygiene, Freie Universitat Berlin, Fachbereich Veterinarmedizin, Luisenstrasse 56, 10117 Berlin, Germany
J Vet Med B Infect Dis Vet Public Health 53:176-80. 2006..could be, in part, a result of an overestimation of the inflammatory potential of endotoxins originating from Pseudomonadaceae by the LAL assay. Pseudomonadaceae were regularly isolated from the air of the duck-fattening unit...
- Strong mimicry of an rRNA binding site for two proteins by the mRNA encoding both proteinsKelly P Williams
Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, Virginia 24061, USA
RNA Biol 5:145-8. 2008..23S rRNA at the primary sequence and secondary structure levels, in a gammaproteobacterial clade comprising Pseudomonadaceae and certain marine bacteria...
- Diversity of endophytic bacteria in Brazilian sugarcaneG S Magnani
Departamento de Bioquimica e Biologia Molecular, Universidade Federal do Parana, Curitiba, PR, Brasil
Genet Mol Res 9:250-8. 2010..Bacilli; group III contained one representative, Curtobacterium sp; group IV contained representatives of the Pseudomonadaceae family, and group V had one isolate with an uncultured bacterium...
- Size distribution of bacterial and fungal bioaerosols in indoor airR L Górny
Department of Indoor Exposure Assessment, Institute of Occupational Medicine and Environmental Health, Koscielna 13, 41 200 Sosnowiec, Poland
Ann Agric Environ Med 6:105-13. 1999..Staphylococcus spp., Bacillus spp., Pseudomonadaceae, Aeromonas spp., Nocardia spp...
- Conservation of surface epitopes in Pseudomonas aeruginosa outer membrane porin protein OprFN L Martin
Department of Microbiology, University of British Columbia, Vancouver, Canada
FEMS Microbiol Lett 113:261-6. 1993..and eight of these mAbs also reacted with proteins from representatives of the rRNA homology group I of the Pseudomonadaceae. Nine of the ten mAbs recognized surface antigenic epitopes as determined by indirect immunofluorescence ..
- Virus particles monitored by fluorescence spectroscopy: a potential detection assay for macromolecular assemblyAlexandra Alimova
Institute for Ultrafast Spectroscopy and Lasers, The City College of New York, Convent Avenue and 137th Street, New York, NY 10031, USA
Photochem Photobiol 80:41-6. 2004..This work demonstrates that fluorescence may offer a novel tool to detect viruses and monitor viral infection of cells and may be part of a biodefense application...
- Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss)D H Kim
School of Life Sciences, Heriot Watt University, Edinburgh, UK
J Appl Microbiol 102:1654-64. 2007..The aim of this study was to understand the microbial community of intestinal contents and mucosal layer in the intestine of rainbow trout by means of culture-dependent conventional and independent molecular techniques...
- Pseudomonas aeruginosa β-lactamase induction requires two permeases, AmpG and AmpPKok Fai Kong
Department of Biological Sciences, College of Arts and Sciences, Florida International University, Miami, FL, USA
BMC Microbiol 10:328. 2010..In Pseudomonadaceae, this intrinsic mechanism remains to be elucidated...
- Bacterioplankton assemblages transforming dissolved organic compounds in coastal seawaterXiaozhen Mou
Department of Marine Sciences, University of Georgia, Athens, GA 30602, USA
Environ Microbiol 9:2025-37. 2007..and gamma-Proteobacteria (mainly members of Altermonadaceae, Chromatiaceae, Oceanospirillaceae and Pseudomonadaceae)...
- Effect of fluorescent pseudomonades and Trichoderma sp. and their combination with two chemicals on Penicillium digitatum caused agent of citrus green moldM Zamani
Department of Plant Protection, College of Horticultural Science and Plant Protection, University of Tehran, Karaj, Iran
Commun Agric Appl Biol Sci 71:1301-10. 2006..Effect of Trichoderma virens on controlling P. digitatum was better than others with or without these chemicals...
- Biocontrol of Rhizoctonia solani, the causal agent of bean damping-off by fluorescent pseudomonadsH Afsharmanesh
Department of Plant Protection, Tehran University, Karaj, Iran
Commun Agric Appl Biol Sci 71:1021-9. 2006..solani inoculums...
- Combined effects of modified atmosphere packaging and thymol for prolonging the shelf life of caprese saladAntonio Bevilacqua
Department of Food Science, Faculty of Agricultural Science, Foggia University, Via Napoli, 25 71100 Foggia, Italy
J Food Prot 70:722-8. 2007..23 log CFU x g(-1) and extended the shelf life from 3.77 to 12 days. A decrease in the concentration of Pseudomonadaceae from 7.03 to 5.09 log CFU x g(-1) was observed, and the lag phase was prolonged to approximately 3 days...
- Species sorting and neutral processes are both important during the initial assembly of bacterial communitiesSilke Langenheder
Department of Ecology and Genetics Limnology, Uppsala University, Uppsala, Sweden
ISME J 5:1086-94. 2011..Most of these taxa belonged to widespread families with opportunistic growth strategies, such as the Pseudomonadaceae and Comamonadaceae, indicating that neutrally assembled taxa may primarily be generalists...
- Staphylococcus spp., Enterobacteriaceae and Pseudomonadaceae oral isolates from Brazilian HIV-positive patients. Correlation with CD4 cell counts and viral loadGraziella Nuernberg Back-Brito
Department of Oral Biosciences and Diagnosis, Laboratory of Microbiology, Sao Jose dos Campos Dental School, Univ Estadual Paulista UNESP, Brazil
Arch Oral Biol 56:1041-6. 2011The aim was to evaluate the presence of Staphylococcus spp., Enterobacteriaceae and Pseudomonadaceae in the oral cavities of HIV-positive patients...
- Use of Lactobacillus plantarum and glucose to control the fermentation of "Bella di Cerignola" table olives, a traditional variety of Apulian region (Southern Italy)Marianne Perricone
Dept of Agro Environmental Sciences, Chemistry and Crop Protection, Faculty of Agricultural Science, Univ of Foggia, Via Napoli 25, 71100 Foggia, Italy
J Food Sci 75:M430-6. 2010..plantarum and a low amount of glucose (0.5%). The result is a decrease of the pH below the safety break point...
- Deciphering the rhizosphere microbiome for disease-suppressive bacteriaRodrigo Mendes
Laboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen 6700 EE, Netherlands
Science 332:1097-100. 2011..Our data indicate that upon attack by a fungal root pathogen, plants can exploit microbial consortia from soil for protection against infections...
- Isolation, selection and characterization of root-associated growth promoting bacteria in Brazil Pine (Araucaria angustifolia)Carlos Marcelo Ribeiro
Soil Microbiology Laboratory, Department of Soil Science, Luiz de Queiroz College of Agriculture, University of Sao Paulo, ESALQ USP, Av Padua Dias, 11, CP 09, 13418 900, Piracicaba, Sao Paulo, Brazil
Microbiol Res 167:69-78. 2012..to characterize the most effective isolates as belonging to Bacillaceae (9 isolates), Enterobacteriaceae (11) and Pseudomonadaceae (1). As far as we know, this is the first study to include the species Ewingella americana as a PGPR.
- Effect of ferritin overexpression in tobacco on the structure of bacterial and pseudomonad communities associated with the rootsAgnès Robin
INRA Université de Bourgogne, UMR Microbiologie et Géochimie des Sols, Dijon, France
FEMS Microbiol Ecol 58:492-502. 2006..The impact of iron overaccumulation by the tobacco transgenic P6 line on pseudomonads supports previous findings on the importance of iron competition among fluorescent pseudomonads...
- Pseudomonas syringae pv. phaseolicola: from 'has bean' to supermodelDawn L Arnold
Centre for Research in Plant Science, University of the West of England, Bristol BS16 1QY, UK
Mol Plant Pathol 12:617-27. 2011..TAXONOMY: Bacteria; Proteobacteria, gamma subdivision; order Pseudomonadales; family Pseudomonadaceae; genus Pseudomonas; species Pseudomonas syringae; Genomospecies 2; pathogenic variety phaseolicola...
- Changes in psychrotrophic microbial populations during milk creaming to produce Grana Trentino cheeseElena Franciosi
IASMA Research and Innovation Centre, Fondazione Edmund Mach, Food Quality and Nutrition Area, Innovative Food Technologies, San Michele all Adige TN, Italy
Food Microbiol 28:43-51. 2011..b>Pseudomonadaceae were commonly isolated in cream samples while Streptococcaceae and Enterobacteriaceae in milk samples...
- Biofouling characteristics and identification of preponderant bacteria at different nutrient levels in batch tests of a recirculating cooling water systemFang Liu
College of Chemistry and Chemical Engineering, China University of Petroleum, 66 Changjiang West Road, Qingdao 266555, P R China
Environ Technol 32:901-10. 2011..Bacillaceae), Proteus (family Enterobacteriaceae), Neisseria (family Neisseriaceae) and Pseudomonas (family Pseudomonadaceae) were dominant in the conditions of lower carbon concentration (30 mg/L)...
- Bacterial diversity in Adélie penguin, Pygoscelis adeliae, guano: molecular and morpho-physiological approachesMarek K Zdanowski
Department of Antarctic Biology, Polish Academy of Sciences, 02 141 Warsaw, Ustrzycka 10, Poland
FEMS Microbiol Ecol 50:163-73. 2004..gene in each of 72 pure isolates, three major phylogenetic groups were identified, namely the Moraxellaceae/Pseudomonadaceae (29 isolates), the Flavobacteriaceae (14), and the Micrococcaceae (29)...
- Rhizosphere bacterial communities associated with disease suppressiveness stages of take-all decline in wheat monocultureH Sanguin
Universite de Lyon, F 69003, Lyon, France
New Phytol 184:694-707. 2009..In conclusion, take-all decline correlated with multiple changes in rhizobacterial community composition, far beyond the sole case of pseudomonads...
- Characterization of a new isolate of Pseudomonas fluorescens strain Psd as a potential biocontrol agentA Upadhyay
Department of Genetics, University of Delhi South Campus, New Delhi, India
Lett Appl Microbiol 47:98-105. 2008..Evaluation of a new isolate of Pseudomonas fluorescens for its biocontrol properties...
- Histamine, cadaverine, and putrescine produced in vitro by enterobacteriaceae and pseudomonadaceae isolated from spinachT Lavizzari
Department of Nutrition and Food Science INSA, Nutrition and Food Safety Research Institute, Faculty of Pharmacy, University of Barcelona, Avinguda Joan XXII s n, E 08028 Barcelona, Spain
J Food Prot 73:385-9. 2010..The strongest cadaverine formation was shown by Serratia liquefaciens (3,300 mg/liter), Serratia marcescens (3,280 mg/liter), and Stenotrophomonas maltophilia (1,000 mg/liter)...
- Composition of epiphytic bacterial communities differs on petals and leavesR R Junker
Department of Animal Ecology and Tropical Biology, University of Wurzburg, Biozentrum, Wurzburg, Germany
Plant Biol (Stuttg) 13:918-24. 2011..Moreover, the bacterial communities differed strongly in composition: while Pseudomonadaceae and Microbacteriaceae were the most abundant families on leaves, Enterobacteriaceae dominated the floral ..
- Anaerobic consumers of monosaccharides in a moderately acidic fenAlexandra Hamberger
Department of Ecological Microbiology, University of Bayreuth, 95445 Bayreuth, Germany
Appl Environ Microbiol 74:3112-20. 2008..Organisms of the families Acidaminococcaceae, Aeromonadaceae, Clostridiaceae, Enterobacteriaceae, and Pseudomonadaceae and the order Actinomycetales, including hitherto unknown organisms, utilized xylose- or glucose-derived ..
- Pseudomonas corrugata: plant pathogen and/or biological resource?Vittoria Catara
Dipartimento di Scienze e Tecnologie Fitosanitarie, Universita degli Studi di Catania, Via Santa Sofia 100, 95123 Catania, Italy
Mol Plant Pathol 8:233-44. 2007..Taxonomy: Bacteria; Proteobacteria; gamma subdivision; order Pseudomonadales; family Pseudomonadaceae; genus Pseudomonas...
- Shelf-life extension of fresh Tuber aestivum and Tuber melanosporum truffles by modified atmosphere packaging with microperforated filmsCarmen Susana Rivera
Dept of Food Technology, Univ of Zaragoza, Miguel Servet 177 50013 Zaragoza, Spain
J Food Sci 75:E225-33. 2010..The shelf life of T. aestivum is prolonged to 21 d and of T. melanosporum to beyond 28 d increasing the possibilities for a foreign market...
- Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patientsMichael J Cox
Department of Medicine, University of California San Francisco, San Francisco, California, United States of America
PLoS ONE 5:e11044. 2010..CFTR) mutation on bacterial abundance and identify genotype-specific communities involving members of the Pseudomonadaceae, Xanthomonadaceae, Moraxellaceae and Enterobacteriaceae amongst others...
- Effect of 2,4,6-trinitrotoluene on soil bacterial communitiesIsabelle George
Unité de Génie Biologique, Universite Catholique de Louvain, Place Croix du Sud 2 19, 1348 Louvain la Neuve, Belgium
J Ind Microbiol Biotechnol 35:225-36. 2008..Analysis of soil bacterial diversity by DGGE showed a predominance of Pseudomonadaceae and Xanthomonadaceae in the TNT-contaminated soils, as well as the presence of Caulobacteraceae...
- [Phylogenetic diversity of culturable bacteria in the ancient salt deposits of the Yipinglang Salt Mine, P. R. China]Yi Guang Chen
Yunnan Institute of Microbiology and Laboratory for Conservation and Utilization of Bio resources, Yunnan University, Kunming 650091, China
Wei Sheng Wu Xue Bao 47:571-7. 2007..Halomonadaceae, Idiomarinaceae, Microbacteriaceae, Micrococcaceae, Moraxellaceae, Planococcaceae, Pseudomonadaceae, Rhodobacteraceae, Dietziaceae, Saccharospirillaceae, Sphingomonadaceae, Staphylococcaceae, Streptomycetaceae)..
- Occurrence of biogenic amines and polyamines in spinach and changes during storage under refrigerationTommaso Lavizzari
Department of Nutrition and Food Science, Faculty of Pharmacy, University of Barcelona, Avinguda Joan XXII s n, E 08028 Barcelona, Spain
J Agric Food Chem 55:9514-9. 2007..Microbial loads throughout storage were also followed, with Pseudomonadaceae and Enterobacteriaceae being the predominant bacterial groups...
- Immunomodulatory activity of Aegle marmelos in freshwater fish (Catla catla) by non-specific protectionV Pratheepa
Department of Aquaculture Biotechnology, Manonmaniam Sundaranar University, Sri Paramakalyani Centre for Environmental Sciences, Alwarkurchi, Tamil Nadu, India
Pharm Biol 49:73-7. 2011..The production of fish is limited by infectious diseases; when a fish grows in an immunosuppressed condition, it becomes highly susceptible to disease...
- Non-canonical CRP sites control competence regulons in Escherichia coli and many other gamma-proteobacteriaAndrew D S Cameron
Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada
Nucleic Acids Res 34:6001-14. 2006..are ubiquitous in the five best-studied gamma-proteobacteria families, Enterobacteriaceae, Pasteurellaceae, Pseudomonadaceae, Vibrionaceae and Xanthomonadaceae...
- A 4-year longitudinal study of the oral prevalence of enteric gram-negative rods and yeasts in Chinese childrenC M Sedgley
Oral Biology Unit, Faculty of Dentistry, University of Hong Kong, Hong Kong
Oral Microbiol Immunol 12:183-8. 1997..from individual children over the 4-year study period was rare, suggesting that carriage of these organisms is transient...
- The three-dimensional structure of the gallium complex of azoverdin, a siderophore of Azomonas macrocytogenes ATCC 12334, determined by NMR using residual dipolar coupling constantsEmeric Wasielewski
, Groupe de RMN, UMR 7104 CNRS, ESBS, , 67400 Illkirch, France
Biochemistry 41:12488-97. 2002..The structural consequences of the particular isopyoverdin chemical structure are discussed in the context of the three-dimensional structures of other pyoverdins...
- Genetic tools for pseudomonads, rhizobia, and other gram-negative bacteriaJohn Davison
Laboratoire de Biologie Cellulaire, Institut National de la Recherche Agronomique, Versailles, France
Biotechniques 32:386-8, 390, 392-4, passim. 2002....
- Microflora investigation experimentK Harada
Health Research Foundation, Kyoto, Japan
Biol Sci Space 15:S190. 2001..Then, we found Serratia liquefaciens and Yersinia enterocolitica and the chemoheterotroph Pseudomonadaceae, Stenotrophomonas maltophila...
- Expression of a Pseudomonas putida aminotransferase involved in lysine catabolism is induced in the rhizosphereM Espinosa-Urgel
Department of Plant Biochemistry and Molecular and Cellular Biology, Estacion Experimental del Zaidin, Consejo Superior de Investigaciones Cientificas, E 18008 Granada, Spain
Appl Environ Microbiol 67:5219-24. 2001..These sets of data suggest that the product of this gene has delta-aminovalerate aminotransferase activity. This is the first direct genetic evidence correlating a DNA sequence with such activity in Pseudomonadaceae.
- Antifungal activity of chitinases produced by some fluorescent pseudomonads against Colletotrichum falcatum Went causing red rot disease in sugarcaneR Viswanathan
Plant Pathology Section, Sugarcane Breeding Institute, Indian Council of Agricultural Research, Coimbatore
Microbiol Res 155:309-14. 2001..Western blot analysis revealed five isoforms of chitinase with molecular masses of 47, 36, 32, 20 and 18.5 kDa. A possible role of chitinases in red rot disease management is discussed...
- Effects of solar radiation and feeding time on behavior, immune response and production of lactating ewes under high ambient temperatureA Sevi
Istituto di Produzioni e Preparazioni Alimentari, Facoltà di Agraria di Foggia, Italy
J Dairy Sci 84:629-40. 2001..EXPM animals also had the greatest amounts of total and fecal coliforms and of Pseudomonadaceae as well as the highest number of mastitis related pathogens in their milk...
- Combined use of acetic acid treatment and modified atmosphere packaging for extending the shelf-life of chilled chicken breast portionsS M Jiménez
Instituto de Technología de Alimentos, Facultad de Ingenieria Quimica, Universidad Nacional del Litoral, Santa Fe, Argentina
J Appl Microbiol 87:339-44. 1999..Results of this study indicate that using modified atmosphere packaging (MAP) on chicken breasts previously decontaminated with acetic acid is a worthwhile technology to extend samples shelf-life...
- Identification of genes unique to Mo-independent nitrogenase systems in diverse diazotrophsT M Loveless
USDA Agriculture Research Service, Raleigh, N C, USA
Can J Microbiol 45:312-7. 1999..gestii possess the potential to express the Fe-only nitrogenase (nitrogenase 3). Like Azotobacter vinelandii, Azotobacter paspali appears to have the potential to express both the V-containing nitrogenase and the Fe-only nitrogenase...
- Water and air in two poultry processing plants' chilling facilities--a bacteriological surveyR Fries
Institute of Anatomy, Physiology and Hygiene of Domestic Animals, University of Bonn, Germany
Br Poult Sci 40:52-8. 1999..Flavobacterium, Alcaligenes, Acinetobacter and Pseudomonadaceae were predominant in these samples. 3...
- Prolyl endopeptidase from Sphingomonas capsulata: isolation and characterization of the enzyme and nucleotide sequence of the geneT Kabashima
School of Pharmaceutical Sciences, Nagasaki University, 1 14 Bunkyo machi, Nagasaki, 852, Japan
Arch Biochem Biophys 358:141-8. 1998..A region near the C-terminus and the region containing the putative catalytic triad residues were highly conserved. The enzyme was crystallized by the hanging drop vapor diffusion method, using ammonium sulfate as a precipitant...
- Potential sources of bacteria that are isolated from contact lenses during wearM D Willcox
School of Optometry and Cooperative Research Centre for Eye Research and Technology, University of New South Wales, Sydney, Australia
Optom Vis Sci 74:1030-8. 1997..The aim of this paper was to determine the possible contamination sources of contact lenses during wear...
- Monoclonal antibody against species-specific epitope of Pseudomonas aeruginosa Hsp60 protein cross-reacts with Pseudomonas stutzeri and other Pseudomonas speciesE Lüneberg
Institut fur Medizinische Mikrobiologie, Medizinische Hochschule Hannover, Germany
FEMS Microbiol Lett 154:131-7. 1997..aeruginosa and all four cross-reacting species constitute a DNA homology group within the rRNA group I of the family Pseudomonadaceae, which belong to the gamma-subclass of the Proteobacteria.
- Differentiation of some gram-negative glucose nonfermenting bacteria using miniaturized carbon sources assimilation testsP Kampfer
Fachgebiet Hygiene der Technischen Universität Berlin
Zentralbl Bakteriol Mikrobiol Hyg B 186:468-77. 1988..been demonstrated by more clinical significant Pseudomonas species, this method proves to be a useful alternative to existing methods of differentiation, especially with representatives of the families Pseudomonadaceae and Alcaligenaceae.
- The structural genes encoding CO dehydrogenase subunits (cox L, M and S) in Pseudomonas carboxydovorans OM5 reside on plasmid pHCG3 and are, with the exception of Streptomyces thermoautotrophicus, conserved in carboxydotrophic bacteriaI Hugendieck
Lehrstuhl fur Mikrobiologie, Universitat Bayreuth, Federal Republic of Germany
Arch Microbiol 157:301-4. 1992..thermoautotrophicus CO dehydrogenase has an unusual electron acceptor specificity and some other properties setting it apart from the 'classical' CO dehydrogenases...
- Teredinibacter turnerae gen. nov., sp. nov., a dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium isolated from the gills of wood-boring molluscs (Bivalvia: Teredinidae)Daniel L Distel
Department of Biochemistry, Microbiology, and Molecular Biology, University of Maine, 5735 Hitchner Hall, Orono, ME 04469 5735, USA
Int J Syst Evol Microbiol 52:2261-9. 2002..nov., sp. nov., is proposed. The type strain is T7902(T) (= ATCC 39867(T) = DSM 15152(T))...
- Molecular diversity in the bacterial community and the fluorescent pseudomonads group in natural and chlorobenzoate-stressed peat-forest soilHugo C Ramírez-Saad
Laboratory of Microbiology, Wageningen University, Hesselink van Suchtelenweg 4, 6703 CT Wageningen, The Netherlands
Microbiol Res 158:47-54. 2003..Accordingly, the Shannon's diversity and equitability indices of these treatments reflected a decreasing trend in time. The approach allowed a direct assessment of community shifts upon contamination of soil...
- A group II intron has invaded the genus Azotobacter and is inserted within the termination codon of the essential groEL geneJean Luc Ferat
Centre de Génétique Moléculaire du CNRS, 91190 Gif sur Yvette, France
Mol Microbiol 49:1407-23. 2003..These findings are discussed in the light of our current knowledge of the biochemistry of group II introns...
- Influence of seasons and sampling strategy on assessment of bioaerosols in sewage treatment plants in SwitzerlandAnne Oppliger
Institute of Occupational Health Sciences, Rue du Bugnon 19, CH 1015 Lausanne, Switzerland
Ann Occup Hyg 49:393-400. 2005..A broad spectrum of different species within the Pseudomonadaceae and the Enterobacteriaceae families were predominant in nearly all plants investigated.
- Detection and characterisation of catechol 2,3-dioxygenase in an indigenous soil pseudomonad by MALDI-TOF MS using a column separationEirini Tsirogianni
Division of Biochemistry, Department of Chemistry, University of Crete, Knossos Avenue, P O Box 1470, GR 71409 Heraklion, Greece
Biodegradation 16:181-6. 2005..Matrix-assisted laser desorption ionization-time of flight mass spectrometry and peptide mapping was attempted for the identification of the isolated protein and proteins involved in the metabolic pathway...
- Use of electrospray ionization mass spectrometry for profiling of crude oil effects on the phospholipid molecular species of two marine bacteriaNicolas Mazzella
Laboratoire de Chimie Analytique de l'Environnement, UMR 6171, IFR PMSE 112, , BP 80, 13545 Aix-en-Provence Cedex 4, France
Rapid Commun Mass Spectrom 19:3579-88. 2005..g. sn fatty acyl chain distribution) that could not be assessed by the classical fatty acid analysis. Moreover, such information should be particularly helpful with regards to bacterial taxonomy and xenobiotic toxicity studies...
- Pseudomonas fluorescens infections in clinical practiceGeorgios Pappas
Internal Medicine Department, University Hospital of Ioannina, Greece
Scand J Infect Dis 38:68-70. 2006..Pseudomonas fluorescens is 1 of the less virulent members of the Pseudomonadaceae family...
- Identification and specific detection of a novel pseudomonadaceae cluster associated with soils from winter wheat plots of a long-term agricultural field experimentManuel Pesaro
Molecular Ecology, Agroscope FAL Reckenholz, Swiss Federal Research Station for Agroecology and Agriculture, Zurich, Switzerland
Appl Environ Microbiol 72:37-43. 2006..systems identified sequences related to Pseudomonas fluorescens and a novel cluster termed Cellvibrio-related Pseudomonadaceae (CRP)...
- Differentiation of carbazole catabolic operons by replacement of the regulated promoter via transposition of an insertion sequenceMasatoshi Miyakoshi
Biotechnology Research Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
J Biol Chem 281:8450-7. 2006....
- In vitro antiseptic properties of an ammonium compound combined with denture base acrylic resinC Pesci-Bardon
Department of Odontology, University Hospital, Nice, France
Gerodontology 23:111-6. 2006..and eventually by extra-oral species such as Staphylococcus spp., Pseudomonadaceae or members of Enterobacteriaceae...