cyprinidae

Summary

Summary: A family of freshwater fish comprising the minnows or CARPS.

Top Publications

  1. Perkins E, Ankley G, Crofton K, Garcia Reyero N, LaLone C, Johnson M, et al. Current perspectives on the use of alternative species in human health and ecological hazard assessments. Environ Health Perspect. 2013;121:1002-10 pubmed publisher
    ..Traditional animal toxicity tests can be time and resource intensive, thereby limiting the number of chemicals that can be comprehensively tested for potential hazards to humans and/or to the environment...
  2. Xu J, Ji P, Wang B, Zhao L, Wang J, Zhao Z, et al. Transcriptome sequencing and analysis of wild Amur Ide (Leuciscus waleckii) inhabiting an extreme alkaline-saline lake reveals insights into stress adaptation. PLoS ONE. 2013;8:e59703 pubmed publisher
    ..The objective of the study is to sequence the transcriptome and obtain a well-assembled transcriptome of Amur ide...
  3. Skolness S, Blanksma C, Cavallin J, Churchill J, Durhan E, Jensen K, et al. Propiconazole inhibits steroidogenesis and reproduction in the fathead minnow (Pimephales promelas). Toxicol Sci. 2013;132:284-97 pubmed publisher
    ..This study provides important data relative to the potential endocrine activity of propiconazole in fish and, more generally, to the further delineation of pathways for the reproductive effects of steroid synthesis inhibitors in fish...
  4. Wang B, Ji P, Xu J, Sun J, Yang J, Xu P, et al. Complete mitochondrial genome of Leuciscus waleckii (Cypriniformes: Cyprinidae: Leuciscus). Mitochondrial DNA. 2013;24:126-8 pubmed publisher
    ..The mitogenome of Amur ide was determined to be 16,605 bp in length. It contains 13 protein-coding genes, 2 rRNA and 22 tRNA genes. This is the first report on the complete mitogenome sequence of Amur ide (L. waleckii)...
  5. Skov C, Chapman B, Baktoft H, Brodersen J, Brönmark C, Hansson L, et al. Migration confers survival benefits against avian predators for partially migratory freshwater fish. Biol Lett. 2013;9:20121178 pubmed publisher
  6. Li Y, Ren Z, Shedlock A, Wu J, Sang L, Tersing T, et al. High altitude adaptation of the schizothoracine fishes (Cyprinidae) revealed by the mitochondrial genome analyses. Gene. 2013;517:169-78 pubmed publisher
  7. Kakioka R, Kokita T, Kumada H, Watanabe K, Okuda N. A RAD-based linkage map and comparative genomics in the gudgeons (genus Gnathopogon, Cyprinidae). BMC Genomics. 2013;14:32 pubmed publisher
    ..We aimed to construct a linkage map of the gudgeons of the genus Gnathopogon (Cyprinidae) for comparative genomics with the zebrafish Danio rerio (a member of the same family as gudgeons) and for the ..
  8. Tao W, Mayden R, He S. Remarkable phylogenetic resolution of the most complex clade of Cyprinidae (Teleostei: Cypriniformes): a proof of concept of homology assessment and partitioning sequence data integrated with mixed model Bayesian analyses. Mol Phylogenet Evol. 2013;66:603-16 pubmed publisher
    Despite many efforts to resolve evolutionary relationships among major clades of Cyprinidae, some nodes have been especially problematic and remain unresolved. In this study, we employ four nuclear gene fragments (3...
  9. Liu H, Chen H, Jing J, Ma X. Cloning and characterization of the HSP90 beta gene from Tanichthys albonubes Lin (Cyprinidae): effect of copper and cadmium exposure. Fish Physiol Biochem. 2012;38:745-56 pubmed publisher
    ..albonubes HSP90? gene provided useful molecular information of T. albonubes responses in stress conditions and potential ways to monitor the chronic stressors in T. albonubes culture environments...

More Information

Publications62

  1. Collin H, Fumagalli L. Evidence for morphological and adaptive genetic divergence between lake and stream habitats in European minnows (Phoxinus phoxinus, Cyprinidae). Mol Ecol. 2011;20:4490-502 pubmed publisher
    ..These results provide new insights into the morphological divergence and genetic basis of adaptation to differentiated habitats...
  2. Morgado Santos M, Matos I, Vicente L, Collares Pereira M. Scaleprinting: individual identification based on scale patterns. J Fish Biol. 2010;76:1228-32 pubmed publisher
    ..The proposed methodology is based on scale patterns that vary greatly between individuals...
  3. Tillitt D, Papoulias D, Whyte J, Richter C. Atrazine reduces reproduction in fathead minnow (Pimephales promelas). Aquat Toxicol. 2010;99:149-59 pubmed publisher
  4. Flores Valverde A, Hill E. Methodology for profiling the steroid metabolome in animal tissues using ultraperformance liquid chromatography-electrospray-time-of-flight mass spectrometry. Anal Chem. 2008;80:8771-9 pubmed publisher
    ..These studies reveal that metabolite profiling using UPLC-TOF MS is a promising approach to investigate steroid homeostasis in animal tissues...
  5. Perea S, B hme M, Zupancic P, Freyhof J, Sanda R, Ozulu M, et al. Phylogenetic relationships and biogeographical patterns in Circum-Mediterranean subfamily Leuciscinae (Teleostei, Cyprinidae) inferred from both mitochondrial and nuclear data. BMC Evol Biol. 2010;10:265 pubmed publisher
    Leuciscinae is a subfamily belonging to the Cyprinidae fish family that is widely distributed in Circum-Mediterranean region. Many efforts have been carried out to deciphering the evolutionary history of this group...
  6. Sch nhuth S, Doadrio I, Dominguez Dominguez O, Hillis D, Mayden R. Molecular evolution of southern North American Cyprinidae (Actinopterygii), with the description of the new genus Tampichthys from central Mexico. Mol Phylogenet Evol. 2008;47:729-56 pubmed publisher
    ..Tampichthys and the putative monotypic genus Codoma are more related to Mexican species of the genera Cyprinella and Notropis than to other species referred to Dionda sensu stricto...
  7. Rao H, Deng J, Wang W, Gao Z. An AFLP-based approach for the identification of sex-linked markers in blunt snout bream, Megalobrama amblycephala (Cyprinidae). Genet Mol Res. 2012;11:1027-31 pubmed publisher
    ..However, none showed sex specificity when we converted these three markers into sequence characterized amplified region markers and evaluated all the individuals from the three populations...
  8. Sasaki T, Kartavtsev Y, Chiba S, Uematsu T, Sviridov V, Hanzawa N. Genetic divergence and phylogenetic independence of Far Eastern species in subfamily Leuciscinae (Pisces: Cyprinidae) inferred from mitochondrial DNA analyses. Genes Genet Syst. 2007;82:329-40 pubmed
    Classification of freshwater fish in the subfamily Leuciscinae, Cyprinidae is hampered by complexity or lack of morphological diversity...
  9. Rüber L, Kottelat M, Tan H, Ng P, Britz R. Evolution of miniaturization and the phylogenetic position of Paedocypris, comprising the world's smallest vertebrate. BMC Evol Biol. 2007;7:38 pubmed
  10. Kruckenhauser L, Haring E, Seemann R, Sattmann H. Genetic differentiation between cave and surface-dwelling populations of Garra barreimiae (Cyprinidae) in Oman. BMC Evol Biol. 2011;11:172 pubmed publisher
    ..As a first approach, we assessed the genetic differentiation between the two morphotypes of G. barreimiae to determine whether gene flow still occurs...
  11. Nachev M, Zimmermann S, Rigaud T, Sures B. Is metal accumulation in Pomphorhynchus laevis dependent on parasite sex or infrapopulation size?. Parasitology. 2010;137:1239-48 pubmed publisher
    ..Thus, for metal monitoring purposes there is no need to take these aspects into account, which makes the use of parasites as bioindicators more applicable...
  12. Yamane H, Watanabe K, Nagata Y. Flexibility of reproductive tactics and their consequences in the brood parasitic fish Pungtungia herzi (Teleostei: Cyprinidae). J Fish Biol. 2009;75:563-74 pubmed publisher
    Although previous studies have claimed that Pungtungia herzi (Cyprinidae) is an obligate brood parasite, in this study a significant proportion of P...
  13. Liasko R, Liousia V, Vrazeli P, Papiggioti O, Chortatou R, Abatzopoulos T, et al. Biological traits of rare males in the population of Carassius gibelio (Actinopterygii: Cyprinidae) from Lake Pamvotis (north-west Greece). J Fish Biol. 2010;77:570-84 pubmed publisher
    ..gibelio males with females could give viable all-female offspring; in comparison with goldfish Carassius auratus males, the fertility of the C. gibelio males was generally reduced but remained highly variable among individuals...
  14. Inacio A, Matos I, Machado M, Coelho M. An easier method to identify the individual genomic composition of allopolyploid complexes. J Fish Biol. 2010;76:1995-2001 pubmed publisher
    ..The method is based on a length polymorphism detected in the beta-actin gene, which serves as the basis for the development of a semi-quantitative PCR...
  15. An W, Hu J, Giesy J, Yang M. Extinction risk of exploited wild roach (Rutilus rutilus) populations due to chemical feminization. Environ Sci Technol. 2009;43:7895-901 pubmed publisher
  16. Thorpe K, Benstead R, Hutchinson T, Tyler C. An optimised experimental test procedure for measuring chemical effects on reproduction in the fathead minnow, Pimephales promelas. Aquat Toxicol. 2007;81:90-8 pubmed
  17. Lamková K, Simkova A, Palíková M, Jurajda P, Lojek A. Seasonal changes of immunocompetence and parasitism in chub (Leuciscus cephalus), a freshwater cyprinid fish. Parasitol Res. 2007;101:775-89 pubmed
  18. Ekman D, Teng Q, Jensen K, Martinovic D, Villeneuve D, Ankley G, et al. NMR analysis of male fathead minnow urinary metabolites: a potential approach for studying impacts of chemical exposures. Aquat Toxicol. 2007;85:104-12 pubmed
    ..The results of these investigations clearly demonstrate the potential utility of an NMR-based approach for assessing chemical exposures in male fathead minnow, using urine collected from individual fish...
  19. Zhao K, Duan Z, Peng Z, Guo S, Li J, He S, et al. The youngest split in sympatric schizothoracine fish (Cyprinidae) is shaped by ecological adaptations in a Tibetan Plateau glacier lake. Mol Ecol. 2009;18:3616-28 pubmed publisher
    ..This study provides the first genetic evidence for sympatric speciation in the schizothoracine fish...
  20. Libertini A, Sola L, Rampin M, Rossi A, Iijima K, Ueda T. Classical and molecular cytogenetic characterization of allochthonous European bitterling Rhodeus amarus (Cyprinidae, Acheilognathinae) from Northern Italy. Genes Genet Syst. 2008;83:417-22 pubmed
    A cytogenetical study was carried out on 34 specimens of the European bitterling Rhodeus amarus (Teleostei: Cyprinidae, Acheilognathinae) from four rivers of the Venice district (NE Italy)...
  21. Pérez Rodríguez R, Dominguez Dominguez O, Pérez Ponce de León G, Doadrio I. Phylogenetic relationships and biogeography of the genus Algansea Girard (Cypriniformes: Cyprinidae) of central Mexico inferred from molecular data. BMC Evol Biol. 2009;9:223 pubmed publisher
    ..In this study, a phylogenetic analysis among species of Algansea is presented. This analysis is based upon two molecular markers, the mitochondrial gene cytochrome b and the first intron of the ribosomal protein S7 gene...
  22. Matos I, Sucena E, Machado M, Gardner R, Inácio A, Schartl M, et al. Ploidy mosaicism and allele-specific gene expression differences in the allopolyploid Squalius alburnoides. BMC Genet. 2011;12:101 pubmed publisher
  23. Brodersen J, Nilsson P, Hansson L, Skov C, Brönmark C. Condition-dependent individual decision-making determines cyprinid partial migration. Ecology. 2008;89:1195-200 pubmed
    ..Moreover, this may be of high importance for understanding population responses to environmental variation as well as ecosystem dynamics and stability...
  24. Dezfuli B, Castaldelli G, Bo T, Lorenzoni M, Giari L. Intestinal immune response of Silurus glanis and Barbus barbus naturally infected with Pomphorhynchus laevis (Acanthocephala). Parasite Immunol. 2011;33:116-23 pubmed publisher
    ..Data are discussed with respect to host immune response to an intestinal helminth and compared with other host-parasite systems...
  25. Bryja J, Smith C, Konecny A, Reichard M. Range-wide population genetic structure of the European bitterling (Rhodeus amarus) based on microsatellite and mitochondrial DNA analysis. Mol Ecol. 2010;19:4708-22 pubmed publisher
  26. Metcalfe C, Chu S, Judt C, Li H, Oakes K, Servos M, et al. Antidepressants and their metabolites in municipal wastewater, and downstream exposure in an urban watershed. Environ Toxicol Chem. 2010;29:79-89 pubmed publisher
    ..The present study illustrates that data are needed on the distribution in the aquatic environment of both the parent compound and the biologically active metabolites of pharmaceuticals...
  27. Pala I, Coelho M, Schartl M. Dosage compensation by gene-copy silencing in a triploid hybrid fish. Curr Biol. 2008;18:1344-8 pubmed publisher
    ..The allelic expression patterns differ between genes and between different tissues for one and the same gene. Our data provide the first evidence of a regulation mechanism involving gene-copy silencing in a triploid vertebrate...
  28. Cunha C, Doadrio I, Abrantes J, Coelho M. The evolutionary history of the allopolyploid Squalius alburnoides (Cyprinidae) complex in the northern Iberian Peninsula. Heredity (Edinb). 2011;106:100-12 pubmed publisher
    ..Therefore, historical events might have a major role in the long-term persistence of some polyploid hybrid taxa...
  29. Marchetto F, Zaccara S, Muenzel F, Salzburger W. Phylogeography of the Italian vairone (Telestes muticellus, Bonaparte 1837) inferred by microsatellite markers: evolutionary history of a freshwater fish species with a restricted and fragmented distribution. BMC Evol Biol. 2010;10:111 pubmed publisher
    ..Here, we investigate the phylogeography of the Italian vairone (Telestes muticellus)...
  30. Schönhuth S, Mayden R. Phylogenetic relationships in the genus Cyprinella (Actinopterygii: Cyprinidae) based on mitochondrial and nuclear gene sequences. Mol Phylogenet Evol. 2010;55:77-98 pubmed publisher
  31. Collares Pereira M, Coelho M. Reconfirming the hybrid origin and generic status of the Iberian cyprinid complex Squalius alburnoides. J Fish Biol. 2010;76:707-15 pubmed publisher
    ..Squalius alburnoides is here defined as a complex based on the existence of a hybrid form with distinct genome combinations and ploidies and of a reconstituted nuclear non-hybrid male form also with hybrid origin...
  32. Ankley G, Jensen K, Kahl M, Makynen E, Blake L, Greene K, et al. Ketoconazole in the fathead minnow (Pimephales promelas): reproductive toxicity and biological compensation. Environ Toxicol Chem. 2007;26:1214-23 pubmed
    ..This has important implications for the interpretation of data from tests with endocrine-active chemicals...
  33. Markova S, Sanda R, Crivelli A, Shumka S, Wilson I, Vukic J, et al. Nuclear and mitochondrial DNA sequence data reveal the evolutionary history of Barbus (Cyprinidae) in the ancient lake systems of the Balkans. Mol Phylogenet Evol. 2010;55:488-500 pubmed publisher
    ..These findings support the emerging pattern that endemic taxa have evolved not through isolation of individual lakes, but in systems of currently and historically interconnected lakes and their wider basins...
  34. Pala I, Schartl M, Thorsteinsdóttir S, Coelho M. Sex determination in the Squalius alburnoides complex: an initial characterization of sex cascade elements in the context of a hybrid polyploid genome. PLoS ONE. 2009;4:e6401 pubmed publisher
    ..The hybrid polyploid complex of Squalius alburnoides was used as a model to address this question...
  35. Agbali M, Reichard M, Bryjová A, Bryja J, Smith C. Mate choice for nonadditive genetic benefits correlate with MHC dissimilarity in the rose bitterling (Rhodeus ocellatus). Evolution. 2010;64:1683-96 pubmed publisher
  36. Tang K, Agnew M, Hirt M, Sado T, Schneider L, Freyhof J, et al. Systematics of the subfamily Danioninae (Teleostei: Cypriniformes: Cyprinidae). Mol Phylogenet Evol. 2010;57:189-214 pubmed publisher
    ..The subfamily Danioninae is not monophyletic, with putative members scattered throughout Cyprinidae. Therefore, we restrict Danioninae to the monophyletic group that includes the following genera: ..
  37. Knapen D, Reynders H, Bervoets L, Verheyen E, Blust R. Metallothionein gene and protein expression as a biomarker for metal pollution in natural gudgeon populations. Aquat Toxicol. 2007;82:163-72 pubmed
    ..Our data provided no evidence to support this hypothesis. In contrast, the ratio of the long mRNA variant relative to total MT mRNA was surprisingly constant, and independent of exposure history...
  38. Yang L, Zha J, Li W, Li Z, Wang Z. Atrazine affects kidney and adrenal hormones (AHs) related genes expressions of rare minnow (Gobiocypris rarus). Aquat Toxicol. 2010;97:204-11 pubmed publisher
    ..We concluded also that atrazine is a potential AHs-disruptor and AHs-related genes in kidney of fish could be used as sensitive molecular biomarkers...
  39. Bogutskaya N, Zuykov M, Naseka A, Anderson E. Normal axial skeleton structure in common roach Rutilus rutilus (Actinopterygii: Cyprinidae) and malformations due to radiation contamination in the area of the Mayak (Chelyabinsk Province, Russia) nuclear plant. J Fish Biol. 2011;79:991-1016 pubmed publisher
    ..rutilus in the River Techa system or the effect of unknown unfavourable environmental factors such as chemical pollution...
  40. Filby A, Neuparth T, Thorpe K, Owen R, Galloway T, Tyler C. Health impacts of estrogens in the environment, considering complex mixture effects. Environ Health Perspect. 2007;115:1704-10 pubmed
  41. Villeneuve D, Mueller N, Martinovic D, Makynen E, Kahl M, Jensen K, et al. Direct effects, compensation, and recovery in female fathead minnows exposed to a model aromatase inhibitor. Environ Health Perspect. 2009;117:624-31 pubmed publisher
    ..Several chemicals in the environment have the potential to inhibit aromatase, an enzyme critical to estrogen synthesis...
  42. Singh M, Kumar R, Nagpure N, Kushwaha B, Gond I, Lakra W. Chromosomal localization of 18S and 5S rDNA using FISH in the genus Tor (Pisces, Cyprinidae). Genetica. 2009;137:245-52 pubmed publisher
    ..18S and 5S rDNA sequencing and chromosomal localization can be a useful genetic marker in species identification as well as phylogenetic and evolutionary studies...
  43. Hayden B, Pulcini D, Kelly Quinn M, O Grady M, Caffrey J, McGrath A, et al. Hybridisation between two cyprinid fishes in a novel habitat: genetics, morphology and life-history traits. BMC Evol Biol. 2010;10:169 pubmed publisher
  44. Mendel J, Lusk S, Vasil eva E, Vasil ev V, Lusková V, Ekmekci F, et al. Molecular phylogeny of the genus Gobio Cuvier, 1816 (Teleostei: Cyprinidae) and its contribution to taxonomy. Mol Phylogenet Evol. 2008;47:1061-75 pubmed publisher
    ..A simple diagnostic method, based on different lengths of the PCR products, called "S7indel diagnostics" is presented for further taxonomic investigations in the genus Gobio...
  45. Levin B, Freyhof J, Lajbner Z, Perea S, Abdoli A, Gaffaroglu M, et al. Phylogenetic relationships of the algae scraping cyprinid genus Capoeta (Teleostei: Cyprinidae). Mol Phylogenet Evol. 2012;62:542-9 pubmed publisher
    ..The origin of Capoeta was found around the Langhian-Serravallian boundary according to our molecular clock. The diversification within the genus occurred along Middle Miocene-Late Pliocene periods...
  46. Boettcher M, Grund S, Keiter S, Kosmehl T, Reifferscheid G, Seitz N, et al. Comparison of in vitro and in situ genotoxicity in the Danube River by means of the comet assay and the micronucleus test. Mutat Res. 2010;700:11-7 pubmed publisher
    ..With respect to the ecological status of the Danube River, the results overall indicate a moderate to severe genotoxic potential with a highly differential localization...
  47. Bessert M, Brozek J, Orti G. Impact of nest substrate limitations on patterns of illegitimacy in the fathead minnow, Pimephales promelas (Cypriniformes: Cyprinidae). J Hered. 2007;98:716-22 pubmed
    ..Although these results are based on a single comparison between 2 sites, the results are intriguing and provide a foundation for future studies...
  48. Fujiwara M, Inafuku J, Takeda A, Watanabe A, Fujiwara A, Kohno S, et al. Molecular organization of 5S rDNA in bitterlings (Cyprinidae). Genetica. 2009;135:355-65 pubmed publisher
    ..Thus, the 5S rDNA in the examined bitterlings might have evolved under a mixed process of evolution...
  49. Knapen D, De Wolf H, Knaepkens G, Bervoets L, Eens M, Blust R, et al. Historical metal pollution in natural gudgeon populations: Inferences from allozyme, microsatellite and condition factor analysis. Aquat Toxicol. 2009;95:17-26 pubmed publisher
  50. Villeneuve D, Murphy M, Kahl M, Jensen K, Butterworth B, Makynen E, et al. Evaluation of the methoxytriazine herbicide prometon using a short-term fathead minnow reproduction test and a suite of in vitro bioassays. Environ Toxicol Chem. 2006;25:2143-53 pubmed
    ..The relevance of these effects to hazard assessment for the pesticide is uncertain...
  51. Lema S, Dickey J, Swanson P. Molecular cloning and sequence analysis of multiple cDNA variants for thyroid-stimulating hormone beta subunit (TSHbeta) in the fathead minnow (Pimephales promelas). Gen Comp Endocrinol. 2008;155:472-80 pubmed
    ..Sequencing of this gene revealed a hairpin loop structure of approximately 300-bp located in the 3' UTR and corresponding to the region of the 332-bp deletion in the 818-bp transcript...
  52. Watanabe K, Jensen K, Orlando E, Ankley G. What is normal? A characterization of the values and variability in reproductive endpoints of the fathead minnow, Pimephales promelas. Comp Biochem Physiol C Toxicol Pharmacol. 2007;146:348-56 pubmed
    ..Based on one of the largest datasets ever compiled for controlled studies, results presented herein provide a robust point of reference for the quantitative assessment of reproductive processes in the fathead minnow...
  53. Villeneuve D, Blake L, Brodin J, Greene K, Knoebl I, Miracle A, et al. Transcription of key genes regulating gonadal steroidogenesis in control and ketoconazole- or vinclozolin-exposed fathead minnows. Toxicol Sci. 2007;98:395-407 pubmed