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Genomes and Genes
| genetic hybridizationSummarySummary: The genetic process of crossbreeding between genetically dissimilar parents to produce a hybrid. Top Publications
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Publications
Hybrid speciationJames Mallet
Galton Laboratory, Department of Biology, University College London, 4 Stephenson Way, London NW1 2HE, UK
Nature 446:279-83. 2007..Now, new genetic evidence suggests that hybrid speciation, even without polyploidy, is more common in plants and also animals than we thought...
A model-based method for identifying species hybrids using multilocus genetic dataE C Anderson
Department of Statistics, University of Washington, Seattle, Washington 98195, USA
Genetics 160:1217-29. 2002..We demonstrate the method on allozyme data from two species of hybridizing trout, as well as on two simulated data sets...
Genomic plasticity and the diversity of polyploid plantsA R Leitch
School of Biological and Chemical Sciences, Queen Mary, University of London, London E1 4NS, UK
Science 320:481-3. 2008..This process has been a major driving force behind the divergence of the angiosperms and their biodiversity...
A genomic view of introgression and hybrid speciationEric J Baack
Department of Botany, University of British Columbia, Vancouver, BC, Canada
Curr Opin Genet Dev 17:513-8. 2007....
Complete mitochondrial DNA replacement in a Lake Tanganyika cichlid fishB Nevado
Department Vertebrates, Royal Belgian Institute of Natural Sciences, 1000 Brussels, Belgium
Mol Ecol 18:4240-55. 2009..callipterus mtDNA lineages, probably still during the water level low stand, and that subsequently the invading mtDNA lineage spread throughout the lake...
Ancient hybridization and mitochondrial capture between two species of chipmunksJeffrey M Good
Department of Ecology and Evolutionary Biology, University of Arizona, Biosciences West, Tucson, AZ 85721, USA
Mol Ecol 17:1313-27. 2008..Our findings challenge long-standing assumptions on patterns of reproductive isolation in chipmunks and suggest that there may be other examples of hybridization among the 23 species of Tamias that occur in western North America...
A rapidly evolving homeobox at the site of a hybrid sterility geneC T Ting
Department of Ecology and Evolution, The University of Chicago, Chicago, IL 60637, USA
Science 282:1501-4. 1998..Such rapid sequence divergence is driven by positive selection and may contribute to reproductive isolation...
Hybrid zones and the genetic architecture of a barrier to gene flow between two sunflower speciesL H Rieseberg
Department of Biology, Indiana University, Bloomington, Indiana 47405, USA
Genetics 152:713-27. 1999..These results demonstrate the utility of hybrid zones for identifying factors contributing to isolation and verify the prediction of increased resolution relative to controlled crosses...
Rapid radiation, ancient incomplete lineage sorting and ancient hybridization in the endemic Lake Tanganyika cichlid tribe TropheiniStephan Koblmüller
Department of Zoology, Karl Franzens University Graz, Universitatsplatz 2, A 8010 Graz, Austria
Mol Phylogenet Evol 55:318-34. 2010..A large degree of correspondence between AFLP clustering and trophic types indicated fewer cases of parallel evolution of trophic ecomorphology than previously inferred from mitochondrial data...
Transgressive segregation, adaptation and speciationL H Rieseberg
Department of Biology, Indiana University, Bloomington, IN 47405, USA
Heredity (Edinb) 83:363-72. 1999..These results lend credence to the view that hybridization may provide the raw material for rapid adaptation and provide a simple explanation for niche divergence and phenotypic novelty often associated with hybrid lineages...
Epigenetic, transposon and small RNA determinants of hybrid dysfunctionsP Michalak
Department of Biology, The University of Texas Arlington, Arlington, TX 76019 0498, USA
Heredity (Edinb) 102:45-50. 2009..The review offers a handful of glimpses into these complex dynamics...
The Drosophila melanogaster hybrid male rescue gene causes inviability in male and female species hybridsD A Barbash
Department of Genetics, University of Cambridge, United Kingdom
Genetics 154:1747-71. 2000..melanogaster mothers. Implications of our findings for understanding Haldane's rule-the observation that hybrid breakdown is often specific to the heterogametic sex-are also discussed...
Leaky prezygotic isolation and porous genomes: rapid introgression of maternally inherited DNAKai M A Chan
Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544 1003, USA
Evolution 59:720-9. 2005..These findings suggest that we should use extreme caution when interpreting single gene genealogies as species phylogenies, especially for cpDNA and mtDNA...
Evolution and expression of homeologous loci in Tragopogon miscellus (Asteraceae), a recent and reciprocally formed allopolyploidJennifer A Tate
Department of Botany, University of Florida, Gainesville, Florida 32611, USA
Genetics 173:1599-611. 2006..Synthetic F(1) hybrids between putative diploid progenitors are additive of their parental genomes, suggesting that polyploidization rather than hybridization induces genomic changes in Tragopogon...
Genetic rescue of inviable hybrids between Drosophila melanogaster and its sibling speciesP Hutter
Nature 327:331-3. 1987..melanogaster females and males of its three closest relatives. The study of this locus may shed light on the genetic control of both speciation and development...
Genetics and the fitness of hybridsJ M Burke
Department of Biology, Indiana University, Bloomington, Indiana 47405, USA
Annu Rev Genet 35:31-52. 2001..In contrast, increased hybrid fitness can be most readily explained through the segregation of additive genetic factors, with epistasis playing a more limited role...
The rise and fall of the mountain hare (Lepus timidus) during Pleistocene glaciations: expansion and retreat with hybridization in the Iberian PeninsulaJ Melo-Ferreira
CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, Universidade do Porto, Campus Agrário de Vairão, 4485 661 Vairão, Portugal
Mol Ecol 16:605-18. 2007..Whether a similar scenario explains the introgression into Iberian L. europaeus remains unclear but it is possible that it hybridized with already introgressed L. granatensis...
Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expressionRita M Graze
Genetics Institute, Department of Molecular Genetics and Microbiology, University of Florida, Gainesville, Florida 3261 3610, USA
Genetics 183:547-61, 1SI-21SI. 2009..In addition, two genes, with critical roles in sex determination and micro RNA processing, Sxl and loqs, were identified as misexpressed in hybrid female heads, potentially contributing to hybrid incompatibility...
Two Dobzhansky-Muller genes interact to cause hybrid lethality in DrosophilaNicholas J Brideau
Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA
Science 314:1292-5. 2006..Rapidly evolving heterochromatic DNA sequences may be driving the evolution of this incompatibility gene...
Asymmetrical reinforcement and Wolbachia infection in DrosophilaJohn Jaenike
Department of Biology, University of Rochester, Rochester, New York, USA
PLoS Biol 4:e325. 2006..Given the widespread occurrence of Wolbachia among insects, it thus appears that there are multiple ways by which these endosymbionts may directly and indirectly contribute to reproductive isolation and speciation...
Speciation reversal and biodiversity dynamics with hybridization in changing environmentsOle Seehausen
Center of Ecology, Evolution and Biogeochemistry, Swiss Institute for Environmental Sciences and Technology EAWAG, Seestrasse 79, 6047 Kastanienbaum, Switzerland
Mol Ecol 17:30-44. 2008..Since heterogeneity of natural environments is rapidly deteriorating in most biomes, the evolutionary ecology of speciation reversal ought to be fully integrated into conservation biology...
Plant speciationLoren H Rieseberg
Department of Botany, University of British Columbia, Vancouver, BC V6T 1Z4, Canada
Science 317:910-4. 2007..Finally, species richness in plants is correlated with many biological and geohistorical factors, most of which increase ecological opportunities...
The hidden side of invasions: massive introgression by local genesMathias Currat
Computational and Molecular Population Genetics Laboratory, Institute of Zoology, University of Bern, Baltzerstrasse 6, 3012 Berne, Switzerland
Evolution 62:1908-20. 2008..Our results imply that speciation genes can be identified by comparing genomes of interfertile native and invading species pairs...
Intra-individual polymorphism in diploid and apomictic polyploid hawkweeds (Hieracium, Lactuceae, Asteraceae): disentangling phylogenetic signal, reticulation, and noiseJudith Fehrer
Institute of Botany, Academy of Sciences of the Czech Republic, Pruhonice, Czech Republic
BMC Evol Biol 9:239. 2009..Concentrating on the supposed major evolutionary units, we used nuclear ribosomal (ETS) and chloroplast (trnT-trnL) sequences in order to disentangle the phylogenetic relationships and to infer the origins of the polyploids...
Introduction. Extent, processes and evolutionary impact of interspecific hybridization in animalsKlaus Schwenk
Department of Ecology and Evolution, J W Goethe University Frankfurt am Main, 60054 Frankfurt am Main, Germany
Philos Trans R Soc Lond B Biol Sci 363:2805-11. 2008..Here we provide firstly a historic perspective of hybridization research, secondly a novel attempt to assess the extent of hybridization among animals and thirdly an overview of the reviews and case studies presented in this theme issue...
Hybridization in the recent pastPeter R Grant
Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544 1003, USA
Am Nat 166:56-67. 2005....
Facultative mate choice drives adaptive hybridizationKarin S Pfennig
Department of Biology, Campus Box 3280, Coker Hall, University of North Carolina, Chapel Hill, NC 27599, USA
Science 318:965-7. 2007..Thus, when the benefits of mate choice vary, females may radically alter their mate selection in response to their own phenotype and their environment, even to the point of choosing males of other species...
Genes and speciationChung-I Wu
Department of Ecology and Evolution, University of Chicago, Chicago, Illinois 60637, USA
Nat Rev Genet 5:114-22. 2004
Genetic mapping of a new set of microsatellite markers in a reference common bean (Phaseolus vulgaris) population BAT93 x Jalo EEP558M C M Grisi
Escola de Agronomia, Universidade Federal de Goias, Goiania, GO, Brasil
Genet Mol Res 6:691-706. 2007....
Haldane's rule in an avian system: using cline theory and divergence population genetics to test for differential introgression of mitochondrial, autosomal, and sex-linked loci across the Passerina bunting hybrid zoneMatthew D Carling
Museum of Natural Science, Louisiana State University, Baton Rouge, Louisiana 70803, USA
Evolution 62:2600-15. 2008....
Interspecific hybridization increases transposition rates of OsvaldoM Labrador
Departament de Genetica i de Microbiologia, Universitat Autonoma de Barcelona, Spain
Mol Biol Evol 16:931-7. 1999..We show that inbreeding has no effect on transposition in the strains used, concluding that hybridization significantly increases the Osvaldo transposition rate...
Genetic basis of adaptive shape differences in the cichlid headR C Albertson
Hubbard Center for Genome Studies and the Department of Zoology, University of New Hampshire, 35 Colovos Road, Durham, NH 03824, USA
J Hered 94:291-301. 2003..Moreover, we find that cosegregation of shape differences in different elements corresponds to developmental, rather than functional, units...
Genome expansion in three hybrid sunflower species is associated with retrotransposon proliferationMark C Ungerer
Curr Biol 16:R872-3. 2006
Convergent evolution of Darwin's finches caused by introgressive hybridization and selectionPeter R Grant
Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544 1003, USA
Evolution 58:1588-99. 2004..The study illustrates how species without postmating barriers to gene exchange can alternate between convergence and divergence when environmental conditions oscillate...
Gene transposition as a cause of hybrid sterility in DrosophilaJohn P Masly
Department of Biology, University of Rochester, Rochester, NY 14627, USA
Science 313:1448-50. 2006..simulans lineage. Because of this transposition, a fraction of hybrids completely lack JYAlpha and are sterile, representing reproductive isolation without sequence evolution...
Prevalence of interspecific hybrids amongst asexual fungal endophytes of grassesC D Moon
Department of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK
Mol Ecol 13:1455-67. 2004..Therefore, the abundance of hybrid species among grass endophytes, and their prevalence in many host populations suggests a selective advantage of hybridization for the mutualistic endophytes...
Phylogeny and phylogeography of the Liolaemus darwinii complex (Squamata: Liolaemidae): evidence for introgression and incomplete lineage sortingMariana Morando
Department of Integrative Biology, and M L Bean Life Science Museum, Brigham Young University, 401 WIDB, Provo, Utah 84602, USA
Evolution 58:842-61. 2004..Additional studies are needed in this group of lizards and in other codistributed groups to determine if Pleistocene climatic changes could be a general factor influencing the evolutionary history of a regional biota...
Parent-dependent loss of gene silencing during interspecies hybridizationCaroline Josefsson
Department of Biology, University of Washington, Seattle, Washington 98195, USA
Curr Biol 16:1322-8. 2006..We propose that the dosage-dependent regulation of chromatin could be a universal phenomenon affecting lethality in interspecies hybrids...
Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybridR J O'Neill
Department of Genetics and Human Variation, La Trobe University, Bundoora, Victoria, Australia
Nature 393:68-72. 1998....
Adaptive evolution drives divergence of a hybrid inviability gene between two species of DrosophilaDaven C Presgraves
Department of Biology, University of Rochester, Rochester, New York 14627, USA
Nature 423:715-9. 2003..These results show that a lethal hybrid incompatibility has evolved as a by-product of adaptive protein evolution...
Extended Newick: it is time for a standard representation of phylogenetic networksGabriel Cardona
Department of Mathematics and Computer Science, University of the Balearic Islands, Palma de Mallorca, Spain
BMC Bioinformatics 9:532. 2008....
Regeneration of somatic hybrids in relation to the nuclear and cytoplasmic genomes of wheat and Setaria italicaFengning Xiang
School of Life Sciences, Shandong University, Jinan 250100, Shandong, China
Genome 47:680-8. 2004..These results indicate that the regeneration of hybrid plants involves not only the integration of S. italica nuclear and organellar DNA, but also the genome complementation of T1 and T2...
Metrics for phylogenetic networks I: generalizations of the Robinson-Foulds metricGabriel Cardona
University of the Balearic Islands, Palma de Mallorca, Spain
IEEE/ACM Trans Comput Biol Bioinform 6:46-61. 2009..We analyze the behavior of these metrics by studying their least and largest values and when they achieve them. As a by-product of this study, we obtain tight bounds on the size of a tree-child time consistent phylogenetic network...
Contrasting genetic structure of adults and progeny in a Louisiana iris hybrid populationR Scott Cornman
Department of Genetics, University of Georgia, Athens, Georgia 30602, USA
Evolution 58:2669-81. 2004....
Phylogeographic inferences concerning evolution of Brazilian Passiflora actinia and P. elegans (Passifloraceae) based on ITS (nrDNA) variationAline P Lorenz-Lemke
Departamento de Genetica, Instituto de Biociencias, Universidade Federal do Rio Grande do Sul, Caixa Postal 15053, 91501 970 Porto Alegre, RS, Brazil
Ann Bot 95:799-806. 2005..The aim of the present work was to analyse in more detail their geographical range in this region of overlap, to investigate intraspecific genetic variability and phylogeographic structure, and to search for possible hybrids...
Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable intersimple sequence repeat (ISSR) bandsA D Wolfe
Department of Plant Biology, Ohio State University, Columbus 43210 1293, USA
Mol Ecol 7:1107-25. 1998..clevelandii is a diploid hybrid species derived from P. centranthifolius and P. spectabilis; and (iii) demonstrate that pollen-mediated gene flow via hummingbird vectors is prevalent in the hybrid complex...
Incongruent plastid and nuclear DNA phylogenies reveal ancient intergeneric hybridization in Pilosella hawkweeds (Hieracium, Cichorieae, Asteraceae)Judith Fehrer
Institute of Botany, Academy of Sciences of the Czech Republic, 25243 Průhonice, Czech Republic
Mol Phylogenet Evol 42:347-61. 2007..These chloroplast capture events, the first of which involved a now extinct haplotype, are the most likely explanation for the observed incongruencies between plastid and nuclear DNA markers...
Natural hybridization in primates: one evolutionary mechanismMichael L Arnold
Department of Genetics, Life Sciences Building, University of Georgia, Athens, GA 30602, USA
Zoology (Jena) 109:261-76. 2006..e. chimpanzees and gorillas) and most likely also our extinct, close relatives in the hominid lineage...
Extensive de Novo genomic variation in rice induced by introgression from wild rice (Zizania latifolia Griseb.)Yong-Ming Wang
Laboratory of Molecular Epigenetics and The State Key Laboratory of Grassland and Ecology, Northeast Normal University, Changchun 130024, China
Genetics 170:1945-56. 2005..Taken together, our results imply that even cryptic alien introgression can be highly mutagenic to a recipient plant genome...
Genetic architecture sets limits on transgressive segregation in hybrid cichlid fishesR Craig Albertson
Department of Cytokine Biology, The Forsyth Institute, Boston, Massachusetts 02115, USA
Evolution 59:686-90. 2005..Results are discussed in the context of the broader question of how phenotypic diversity may be achieved in rapidly evolving systems...
Combined use of maternal, paternal and bi-parental genetic markers for the identification of wolf-dog hybridsC Vila
Department of Evolutionary Biology, Uppsala University, Sweden
Heredity (Edinb) 90:17-24. 2003..This finding confirms that inter-specific hybridization between wolves and dogs can occur in natural wolf populations. A possible correlation between hybridization and wolf population density and disturbance deserves further research...
The basis of natural and artificial postzygotic hybridization barriers in Arabidopsis speciesCatherine Bushell
Department of Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, United Kingdom
Plant Cell 15:1430-42. 2003..Our results also demonstrate that manipulation of DNA methylation can be sufficient to erect hybridization barriers, offering a potential mechanism for speciation and a means of controlling gene flow between species...
QTL mapping for growth and carcass traits in an Iberian by Landrace pig intercross: additive, dominant and epistatic effectsL Varona
Area de Produccio Animal, Centre UdL IRTA, c Rovira Roure 177, 25198 Lleida, Spain
Genet Res 80:145-54. 2002..The results of the bidimensional genomic scan showed that the genetic architecture was mainly additive or the experimental set-up did not have enough power to detect epistatic interactions...
Internal transcribed spacer repeat-specific primers and the analysis of hybridization in the Glycine tomentella (Leguminosae) polyploid complexJason T Rauscher
L H Bailey Hortorium, 228 Plant Science, Cornell University, Ithaca, NY 14853, USA
Mol Ecol 11:2691-702. 2002..Other strategies, such as the use of exclusion primers, may detect rare parental repeat types in hybrids when previous hypotheses regarding the second parental species are lacking...
Gene expression analysis of the ovary of hybrid females of Xenopus laevis and X. muelleriJohn H Malone
Department of Biology, The University of Texas Arlington, Box 19498, Arlington, Texas, 76010, USA
BMC Evol Biol 8:82. 2008..muelleri). In this work, we examine the gene expression pattern in hybrid females of X. laevis x X. muelleri to determine if this asymmetrical pattern of expression also occurs in hybrid females...
The origin of ecological divergence in Helianthus paradoxus (Asteraceae): selection on transgressive characters in a novel hybrid habitatChristian Lexer
Indiana University, Department of Biology, Jordan Hall 325, Bloomington, Indiana 47405, USA
Evolution 57:1989-2000. 2003..annuus and H. petiolaris. These results are consistent with the hypothesis that transgressive segregation of elemental uptake and leaf succulence contributed to the origin of salt adaptation in the diploid hybrid species H. paradoxus...
Molecular cytogenetic analysis of wheat-barley hybrids using genomic in situ hybridization and barley microsatellite markersL Malysheva
Institute of Plant Genetics and Crop Plant Research, IPK, Correns Str 3, 06466 Gatersleben, Germany
Genome 46:314-22. 2003..These methods were complementary and provided comprehensive information about the genomic constitution of the plants produced...
Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE dataShuhui Song
Key Laboratory of Genome Science and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 101300, China
BMC Plant Biol 7:49. 2007....
Review. Lifelong commitment to the wrong partner: hybridization in antsHeike Feldhaar
Lehrstuhl für Verhaltensphysiologie und Soziobiologie Zoologie II, Universitat Wurzburg, Am Hubland, 97074 Wurzburg, Germany
Philos Trans R Soc Lond B Biol Sci 363:2891-9. 2008..The morphological similarity of most ant males, perhaps resulting from the lack of sexual conflict, may similarly contribute to the commoness of hybridization...
Environment-dependent admixture dynamics in a tiger salamander hybrid zoneBenjamin M Fitzpatrick
Center for Population Biology and Section of Evolution and Ecology, University of California, Davis, California 95616, USA
Evolution 58:1282-93. 2004..A third was more likely to have heterozygote excess in ephemeral cattle ponds. These patterns indicate that admixture is influenced by complex genotype-by-environment interactions...
A powerful regression-based method for admixture mapping of isolation across the genome of hybridsZachariah Gompert
Department of Botany and Program in Ecology, University of Wyoming, Laramie, 82071, USA
Mol Ecol 18:1207-24. 2009....
Selection on leaf ecophysiological traits in a desert hybrid Helianthus species and early-generation hybridsFulco Ludwig
Department of Plant Biology, 2502 Plant Sciences Building, University of Georgia, Athens, Georgia 30602 7271, USA
Evolution 58:2682-92. 2004....
Mapping QTLs for popping ability in a popcorn x flint corn crossR Babu
Vivekananda Institute of Hill Agriculture ICAR, 263601, Almora, Uttaranchal, India
Theor Appl Genet 112:1392-9. 2006..22) and UPK (1.11) indicated that marker-based selection could be relatively more efficient. The QTL on chromosome 1S for PEV was found to be most significant, where QTLs for hard endosperm starch concentration had been detected earlier...
The role of hybridization, polyploidization and glaciation in the origin and evolution of the apomictic Ranunculus cassubicus complexOvidiu Paun
Department of Systematic and Evolutionary Botany, Institute of Botany, University of Vienna, Rennweg 14, A-1030 Vienna, Austria
New Phytol 171:223-36. 2006..In turn, asexuality has permitted the perpetuation and establishment of ecologically divergent hybrid genotypes...
Molecular demographic history of the annual sunflowers Helianthus annuus and H. petiolaris--large effective population sizes and rates of long-term gene flowJared L Strasburg
Department of Biology, Indiana University, 915 E 3rd Street 150, Bloomington, Indiana 47405, USA
Evolution 62:1936-50. 2008....
Poorly known relatives of Arabidopsis thalianaMaria J Clauss
Max Planck Institute of Chemical Ecology, 07745 Jena, Germany
Trends Plant Sci 11:449-59. 2006..thaliana can be applied to gain insights into adaptive evolution of ecologically important traits and genome-wide processes, such as polyploidy, speciation and reticulate evolution, within and among Arabidopsis species...
[The genetic asymmetry of the hybrid green frogs Rana esculenta (Amphibia: Ranidae) complex of Ukraine]S Iu Morozov-Leonov
Tsitol Genet 40:10-5. 2006..That is why the genetic skewness of hybrids becomes apparent at the skin level and corresponds to its manifestations at the organism level...
A cytonuclear incompatibility causes anther sterility in Mimulus hybridsLila Fishman
Division of Biological Sciences, University of Montana, Missoula, Montana 59812, USA
Evolution 60:1372-81. 2006....
Phylogeography and population structure of the saker falcon (Falco cherrug) and the influence of hybridization: mitochondrial and microsatellite dataFranziska Nittinger
Museum of Natural History Vienna, Department of Vertebrate Zoology, Burgring 7, A 1010 Vienna, Austria
Mol Ecol 16:1497-517. 2007..A combination of evolutionary processes, including incomplete lineage sorting as well as hybridization, may be responsible for the currently observed genetic patterns in hierofalcons...
Natural variation for fertile triploid F1 hybrid formation in allohexaploid wheat speciationYoshihiro Matsuoka
Fukui Prefectural University, Matsuoka, Eiheiji, Yoshida, Fukui, 910 1195, Japan
Theor Appl Genet 115:509-18. 2007..turgidum. Implications of our findings on how natural variation in the ability of Ae. tauschii to express those postzygotic reproductive phenotypes diversified and contributed to the speciation of T. aestivum are discussed...
Phylogeography, hybridization and Pleistocene refugia of the kob antelope (Kobus kob)Eline D Lorenzen
Institute of Biology, University of Copenhagen, Universitetsparken 15, 2100 Copenhagen Ø, Denmark
Mol Ecol 16:3241-52. 2007..Due to similarities in phenotype and ecology, and the joint evolutionary history of their mtDNA sequences, the taxonomic status of K. k. kob and K. k. thomasi as separate subspecies is called into question...
Evolutionary relationships and reproductive isolating mechanisms in the rice frog (Fejervarya limnocharis) species complex from Sri Lanka, Thailand, Taiwan and Japan, inferred from mtDNA gene sequences, allozymes, and crossing experimentsMasayuki Sumida
Institute for Amphibian Biology, Graduate School of Science, Hiroshima University, Higashihiroshima, Japan
Zoolog Sci 24:547-62. 2007..The present, preliminary survey may raise questions about the species status of these particular populations and also about the nature of the biological species concept...
Natural hybridization in heliconiine butterflies: the species boundary as a continuumJames Mallet
Galton Laboratory, University College London, Wolfson House, 4 Stephenson Way, London NW1 2HE, UK
BMC Evol Biol 7:28. 2007..To understand speciation and the maintenance of taxa as separate entities, we need information about natural hybridization and gene flow among species...
Natural variation for a hybrid incompatibility between two species of MimulusAndrea L Sweigart
Department of Biology, Duke University, Durham, North Carolina 27708, USA
Evolution 61:141-51. 2007..guttatus population revealed that the hms1 locus is polymorphic and that the incompatibility allele appears to segregate at intermediate frequency, a pattern that is consistent with either genetic drift or natural selection...
Ecological divergence associated with mating system causes nearly complete reproductive isolation between sympatric Mimulus speciesNoland H Martin
Department of Biology, Texas State University, San Marcos, Texas 78666, USA
Evolution 61:68-82. 2007....
Evolutionary genetics: who shouldn't be your daddyPatrick C Phillips
Nature 451:640-1. 2008
A major locus expressed in the male gametophyte with incomplete penetrance is responsible for in situ gynogenesis in maizeP Barret
INRA, UMR1095 Génétique, Diversité et Ecophysiologie des Céréales GDEC, 234 avenue du Brezet, 63100 Clermont Ferrand, France
Theor Appl Genet 117:581-94. 2008..We propose the occurrence of a gametophytic-specific process which leads to segregation distortion at the ggi1 locus associated with gynogenetic induction with incomplete penetrance...
Molecular mapping of hybrid necrosis genes Ne1 and Ne2 in hexaploid wheat using microsatellite markersC-G Chu
Department of Plant Sciences, North Dakota State University, Fargo, ND 58105, USA
Theor Appl Genet 112:1374-81. 2006..The closely linked microsatellite markers identified in this study can be used to genotype parental lines for Ne1 and Ne2 or to eliminate the two hybrid necrosis genes using marker-assisted selection...
The genetic basis of postzygotic reproductive isolation between Drosophila santomea and D. yakuba due to hybrid male sterilityAmanda J Moehring
Department of Genetics, North Carolina State University, Raleigh 27695, USA
Genetics 173:225-33. 2006..yakuba and D. santomea. These results provide the basis for future high-resolution mapping and ultimately, molecular cloning, of the interacting genes that contribute to hybrid sterility...
Genetic analysis of speciation by means of introgression into Drosophila melanogasterK Sawamura
Department of Ecology and Evolution, University of Chicago, 1101 East 57th Street, Chicago, IL 60637, USA
Proc Natl Acad Sci U S A 97:2652-5. 2000..The extent of interspecific genetic divergence underlying hybrid male sterility, especially in contrast with the low degree of inviability and female sterility, is far greater than expected from previous studies...
Genetic dissection of hybrid incompatibilities between Drosophila simulans and D. mauritiana. III. Heterogeneous accumulation of hybrid incompatibilities, degree of dominance, and implications for Haldane's ruleYun Tao
Developmental, Cell and Molecular Biology Group, Department of Zoology, Duke University, Durham, North Carolina 27708, USA
Evolution 57:2580-98. 2003..This hypothesis not only explains Haldane's rule in a simple way, but also suggests that genomic conflicts play a major role in evolution and speciation...
Reproductive isolation and phylogenetic divergence in Neurospora: comparing methods of species recognition in a model eukaryoteJeremy R Dettman
Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 3102, USA
Evolution 57:2721-41. 2003..We also observed sympatry-associated sexual dysfunction in interspecific crosses, which was consistent with the existence of reinforcement mechanisms...
Initial stages of reproductive isolation in two species of the endangered Sonoran topminnowCarla R Hurt
School of Life Sciences, Arizona State University, Tempe, Arizona 85287, USA
Evolution 57:2835-41. 2003..Our results illustrate the importance of distinctly defining hybrid classes in studies of reproductive isolation. To our knowledge, this is the first such detailed evolutionary analysis in endangered fish taxa...
Genetic differentiation at nuclear and mitochondrial loci among large white-headed gulls: sex-biased interspecific gene flow?Pierre Andre Crochet
Laboratoire Genome, Populations, Interactions, CNRS UMR 5000, Universite Montpellier II, Place E Bataillon, F 34095 Montpellier Cedex 5, France
Evolution 57:2865-78. 2003..Because hybridization is a widespread phenomenon in birds, many of these cases might be due to interspecific gene flow...
Allochronic differentiation among Daphnia species, hybrids and backcrosses: the importance of sexual reproduction for population dynamics and genetic architectureT Jankowski
Limnological Institute, University of Konstanz, Konstanz, Germany
J Evol Biol 17:312-21. 2004....
Allelic melanism in American and British peppered mothsB S Grant
Department of Biology, College of William and Mary, Williamsburg, VA 23187 8795, USA
J Hered 95:97-102. 2004..The possibility of close linkage at two loci remains, but the simpler one-locus model cannot be rejected in the absence of contrary evidence...
No apparent reduction of gene flow in a hybrid zone between the West and North European karyotypic groups of the common shrew, Sorex araneusA C Andersson
Department of Conservation Biology and Genetics, Evolutionary Biology Centre, Uppsala University, Norbyvagen 18 D, SE 752 36 Uppsala, Sweden
Mol Ecol 13:1205-15. 2004..Hence, considerable chromosomal differences do not seem to prevent extensive gene flow...
Genetics of postzygotic isolation in Eucalyptus: whole-genome analysis of barriers to introgression in a wide interspecific cross of Eucalyptus grandis and E. globulusAlexander A Myburg
Department of Forestry, North Carolina State University, Raleigh, North Carolina 27695, USA
Genetics 166:1405-18. 2004....
Multiple hybrid origins, genetic diversity and population genetic structure of two endemic Sorbus taxa on the Isle of Arran, ScotlandA Robertson
Institute of Ecology and Resource Management, University of Edinburgh, King's Buildings, Mayfield Road, Edinburgh EH9 3JU, UK
Mol Ecol 13:123-34. 2004..These results indicate that the endemic Sorbus taxa on Arran are the products of multiple and ongoing evolutionary events. This information must be incorporated into management policies for their future conservation...
Reproductive division of labor between hybrid and nonhybrid offspring in a fire ant hybrid zoneSara Helms Cahan
Department of Entomology, Texas A and M University, College Station, Texas 77843 2475, USA
Evolution 57:1562-70. 2003....
Hybridization and postzygotic isolation patterns in pigeons and dovesDarío A Lijtmaer
División Ornitología, Museo Argentino de Ciencias Naturales Bernardino Rivadavia, Avenida Angel Gallardo 470 CI405DJR, Buenos Aires, Argentina
Evolution 57:1411-8. 2003....
Contrasting patterns of mitochondrial DNA and microsatellite introgressive hybridization between lineages of lake whitefish (Coregonus clupeaformis); relevance for speciationG Lu
GIROQ, , , Ste-Foy, , Canada G1K 7P4
Mol Ecol 10:965-85. 2001..Thus, each lake may be viewed as a different temporal snapshot taken throughout the gradual process of speciation...
Genetic assessment of a white-collared x red-fronted lemur hybrid zone at Andringitra, MadagascarYael M Wyner
Department of Entomology, American Museum of Natural History, New York, New York 10024, USA
Am J Primatol 57:51-66. 2002..f. rufus populations. The remaining three individuals were found to contain only markers for E. albocollaris. These results indicate that the population at Andringitra is a hybrid population between E. albocollaris and E.f. rufus...
[Intra- and interspecies differences in the ISSR-PCR patterns of bumble bee (Hymenoptera: Bombinae)]O P Berezovskaia
Tsitol Genet 36:28-35. 2002....
Likely multiple origins of a diploid hybrid sunflower speciesA E Schwarzbach
Department of Biological Sciences, Kent State University, Kent, OH 44242, USA
Mol Ecol 11:1703-15. 2002..Given the age of H. anomalus (> 100 000 years bp), it may be that microsatellite evidence for recurrent speciation has been eroded by mutation and gene flow through pollen...
Generation and mapping of AFLP, SSRs and SNPs in Lycopersicon esculentumSaskia Suliman-Pollatschek
MBC, 5 Oppenheimer St. Science Park Rehovot P.O.B 4018 Nes- Ziona 70400, Israel
Cell Mol Biol Lett 7:583-97. 2002..A total of 52 microsatellites, 159 polymorphic AFLP markers and six SNPs were mapped using the Introgression Lines generated by [1]. Map location and markers' distribution are presented...
Linkage mapping in tetraploid willows: segregation of molecular markers and estimation of linkage phases support an allotetraploid structure for Salix alba x Salix fragilis interspecific hybridsG Barcaccia
Department of Environmental Agronomy and Crop Production, University of Padova, Agripolis, Via Romea 16, I 35020 Legnaro, Padova, Italy
Heredity (Edinb) 90:169-80. 2003..alba- and S. fragilis-specific markers found in both parental combinations (on average, 65.3 vs 34.7%, respectively) supports the (phylogenetic) hypothesis that S. fragilis is derived from S. alba-like progenitors...
A spatially explicit individual-based model of reinforcement in hybrid zonesSuzanne Sadedin
Department of Biological Sciences, Monash University, Victoria 3800 Australia
Evolution 57:962-70. 2003..In addition, the results show that hybrid infertility may facilitate the process of reinforcement and speciation...
A linkage map for the hybridising toads Bombina bombina and B. variegata (Anura: Discoglossidae)B Nürnberger
Department Biologie II, Ludwig Maximilians Universitat, Karlstr 23 25, 80333 München, Germany
Heredity (Edinb) 91:136-42. 2003..Among the 40 isolated CA microsatellites, we noted a preponderance of compound and frequently interleaved CA-TA repeats as well as a striking polarity at the 5' end of the repeats...
Functional divergence caused by ancient positive selection of a Drosophila hybrid incompatibility locusDaniel A Barbash
Section of Evolution and Ecology, University of California, Davis, USA
PLoS Biol 2:e142. 2004..Our findings suggest that multiple substitutions driven by natural selection may be a general phenomenon required to generate hybrid incompatibility alleles...
Accumulating Dobzhansky-Muller incompatibilities: reconciling theory and dataJohn J Welch
Centre for the Study of Evolution, School of Life Sciences, University of Sussex, Brighton BN1 9QG, Sussex, United Kingdom
Evolution 58:1145-56. 2004..None of the models available in the literature can account for all of the empirical patterns. However, modified versions of the models can do so. Ways of discriminating between the different models are then discussed...
Research Grants
- Virulence determinants in S. aureus bacteremiaVance Fowler; Fiscal Year: 2006..groups, identified by Multilocus Sequence Typing (MLST), and can be localized in the genome by comparative genetic hybridization (CGH). In order to test this hypothesis, we propose to: 1) Define the allelic diversity of 1000 S...
- UV CARCINOGENESIS IN NONMAMMALIAN ANIMAL MODELSRodney Nairn; Fiscal Year: 1999..available in genetic hybrids of the genus Xiphophorus, in which genetic factors can be manipulated through genetic hybridization of different Xiphophorus species. Recently, UV-inducible Xiphophorus melanoma models have been developed...
- GENETIC BASIS OF SPECIES DIFFERENCES IN DROSOPHILAJerry Coyne; Fiscal Year: 2009..We will perform laboratory studies of tolerance and preference to understand these anomalies. Our results may be relevant to understanding the origin of species in other animal groups, including humans. ..
- GENETIC BASIS OF SPECIES DIFFERENCES IN DROSOPHILAJerry Coyne; Fiscal Year: 2005..abstract_text> ..
- GENETIC BASIS OF SPECIES DIFFERENCES IN DROSOPHILAJerry Coyne; Fiscal Year: 2009..We will perform laboratory studies of tolerance and preference to understand these anomalies. Our results may be relevant to understanding the origin of species in other animal groups, including humans. ..
- GENETIC BASIS OF SPECIES DIFFERENCES IN DROSOPHILAJerry Coyne; Fiscal Year: 2001..The proposed research will focus on phenotypes in each of these three categories, subjecting each to a gene mapping protocol. ..
- The genetics of hybrid male sterility in Drosophila virilis and D. americanaAndrea Sweigart; Fiscal Year: 2007..The proposed study is relevant to public health because studies of Drosophila fertility can be applied to understanding the genetics of human fertility. ..
- GENETIC BASIS OF SPECIES DIFFERENCES IN DROSOPHILAJerry Coyne; Fiscal Year: 2007..We will perform laboratory studies of tolerance and preference to understand these anomalies. Our results may be relevant to understanding the origin of species in other animal groups, including humans. ..
- TRANSGRESSIVE SEGREGATION, ADAPTATION, AND SPECIATIONLoren Rieseberg; Fiscal Year: 2007..The proposed work represents an important step toward understanding the contribution of hybridization to adaptive evolution and speciation. ..
- The genetic basis of speciation in DrosphilaH Orr; Fiscal Year: 2007..Our long-term goal is to understand how animal species, including humans, arise by uncovering the genetic causes of speciation. ..
- Molecular genetics of Drosophila hybrid lethalityDANIEL BARBASH; Fiscal Year: 2007..simulans as well as several other Drosophila species will greatly enhance both the technical feasibility and the potential impact of this proposal as a model for testing functional consequences of sequence divergence. ..
- Molecular genetics of Drosophila hybrid lethalityDaniel A Barbash; Fiscal Year: 2010..Understanding the consequences of the evolutionary patterns of these genes will help to reveal how species including humans maintain a functionally coherent genome. ..
- The genetic basis of speciation in DrosophilaH Allen Orr; Fiscal Year: 2010....
- The genetic basis of speciation in DrosophilaH Orr; Fiscal Year: 2004..abstract_text> ..
- The genetic basis of speciation in DrosophilaH Orr; Fiscal Year: 2009....
- Genetic Environmental Relationship Between Bone, Obesity and Leptin in MiceJames Cheverud; Fiscal Year: 2007..This project will identify novel genes and physiological pathways affecting osteoporosis and examine how genetic and environmentally-based obesity affects bone mass, morphology and biomechanical function. ..
- A Mouse Model for Complex Human DiseasesJames Cheverud; Fiscal Year: 2009..Backcrossing with SM/J will be used to narrow the QTL interval for strain loss and to produce a new strain, carrying the unusual phenotypes of SM/J without requiring enforced heterozygosity at the agouti locus. ..
- A Mouse Model for Complex Human DiseasesJames Cheverud; Fiscal Year: 2009..Backcrossing with SM/J will be used to narrow the QTL interval for strain loss and to produce a new strain, carrying the unusual phenotypes of SM/J without requiring enforced heterozygosity at the agouti locus. ..
- GENETIC BASIS OF DIETARY OBESITY IN MICEJames Cheverud; Fiscal Year: 2007..These studies will increase our knowledge of the important physiological effects of dietary fat, including the genetic variants responsible for individual variations in response to a high fat diet. ..
- Sperm recognition genesJulie Alipaz; Fiscal Year: 2004..All female specific transcripts will be explored for their possible involvement in gametic interactions and ultimately species divergence. ..
- Molecular genetics of hybrid incompatibilities in DrosophilaDaven C Presgraves; Fiscal Year: 2010..Since we are concentrating on hybrid inviability, some of our work will involve characterizing previously unstudied viability-essential genes and gene interactions that have functions required in all eukaryotes, including humans. ..
- Genetics of reproductive isolation in ArabidopsisKIRSTEN BOMBLIES YANT; Fiscal Year: 2007..I will also analyze the population dynamics and molecular evolution of the incompatibility alleles to ask whether they have adaptive value to the parental strains. ..
- Evolutionary genomics of new Drosophila genesDAVEN PRESGRAVES; Fiscal Year: 2004..The methods developed will be applicable in comparative analysis of other genomes, including those of humans and their primate relatives. ..
- Genetics Basis of Dietary Obesity in MiceJames Cheverud; Fiscal Year: 2009..These studies will increase our knowledge of the important physiological effects of dietary fat, including the genetic variants responsible for individual variations in response to a high fat diet. ..
- GENETIC VARIATION IN MURINE LONG BONE GROWTH AND DEVELOPMENTJames M Cheverud; Fiscal Year: 2010..The outcome of these experiments will be a better understanding of the genetic, molecular, and cellular processes responsible for variation in limb growth with consequences for our understanding of pathologies of growth. ..
- Genetic Environmental Relationship Between Bone Obesity and Leptin in MiceJames M Cheverud; Fiscal Year: 2010..This project will identify novel genes and physiological pathways affecting osteoporosis and examine how genetic and environmentally-based obesity affects bone mass, morphology and biomechanical function. ..
- A Mouse Model for Complex Human DiseasesJames Cheverud; Fiscal Year: 2003..We will test whether animals subjected to relatively poor pre- and neonatal environments respond more strongly to the high fat diet. We will map quantitative trait loci for these genetic maternal effects and their interaction with diet. ..
- GENE INTERACTION FOR BODY WEIGHT COMPONENTS IN MICEJames Cheverud; Fiscal Year: 2002..In addition to positional cloning of the QTLs, congenic strains will be formed for each QTL and will be tested, along with the LGxSM recombinant inbred strains for a variety of obesity-related traits. ..
- GENETIC BASIS OF DIETARY OBESITY IN MICEJames Cheverud; Fiscal Year: 2005..This project will be the first to detect and map genes specifically affecting response to a high fat diet. ..
- GENETIC VARIATION IN MURINE LONG BONE GROWTH AND DEVELOPMENTJames Cheverud; Fiscal Year: 2007..The outcome of these experiments will be a better understanding of the genetic, molecular, and cellular processes responsible for variation in limb growth with consequences for our understanding of pathologies of growth. ..
- GENE INTERACTION FOR BODY WEIGHT COMPONENTS IN MICEJames Cheverud; Fiscal Year: 1999....
- Transposons, RNA Interference and HeterochromatinRobert Martienssen; Fiscal Year: 2009..These genic sRNAs may be responsible for sporadic gene methylation (epialleles) in ddm1. Cancer cells have similar changes in DNA methylation, which may use the same mechanism. ..
- Transposons, RNA Interference and HeterochromatinRobert A Martienssen; Fiscal Year: 2010..These genic sRNAs may be responsible for sporadic gene methylation (epialleles) in ddm1. Cancer cells have similar changes in DNA methylation, which may use the same mechanism. ..
- RNAi, Histone Modification and the DDB1/CPSF-like Complex Rik1Robert A Martienssen; Fiscal Year: 2010..Transposable elements and other repeats are common to all of these genomes, and may hold the key to epigenetic mechanisms of gene regulation and chromosome function. ..
- The Etiology of UV-Induced MelanomaDavid Mitchell; Fiscal Year: 2007..From these studies we hope to define the effective solar wavelength boundaries of melanoma, identify the class of DNA damage critical to CMM and elucidate the role of DNA repair in tumor suppression. ..
- Transposons, RNA Interference and HeterochromatinRobert Martienssen; Fiscal Year: 2006..Preliminary data suggests this mechanism is conserved in Arabidopsis. We will use each system to explore the ancient role of heterochromatin in chromosome biology. ..
- A Drosophila model for genomic analysis of Metabolic SyndromeLaura Reed; Fiscal Year: 2007....
