oceanospirillaceae

Summary

Summary: A family of gram-negative bacteria in the order Oceanospirillales.

Top Publications

  1. Hazen T, Dubinsky E, DeSantis T, Andersen G, Piceno Y, Singh N, et al. Deep-sea oil plume enriches indigenous oil-degrading bacteria. Science. 2010;330:204-8 pubmed publisher
    ..Based on these results, the potential exists for intrinsic bioremediation of the oil plume in the deep-water column without substantial oxygen drawdown...
  2. Arahal D, Lucena T, Macián M, Ruvira M, Gonzalez J, Lekumberri I, et al. Marinomonas blandensis sp. nov., a novel marine gammaproteobacterium. Int J Syst Evol Microbiol. 2016;66:5544-5549 pubmed publisher
    ..3 and 93.3-95.7?% sequence similarities, respectively), within the family Oceanospirillaceae. Strain MED121T was included into a whole-genome sequencing study and, subsequently, it was characterized ..
  3. Kleindienst S, Grim S, Sogin M, Bracco A, Crespo Medina M, Joye S. Diverse, rare microbial taxa responded to the Deepwater Horizon deep-sea hydrocarbon plume. ISME J. 2016;10:400-15 pubmed publisher
    ..a previously unrecognized diversity of closely related taxa affiliating with Cycloclasticus, Colwellia and Oceanospirillaceae and describe their spatio-temporal distribution in the Gulf's deepwater, in close proximity to the discharge ..
  4. Lofthus S, Netzer R, Lewin A, Heggeset T, Haugen T, Brakstad O. Biodegradation of n-alkanes on oil-seawater interfaces at different temperatures and microbial communities associated with the degradation. Biodegradation. 2018;29:141-157 pubmed publisher
    ..The primary bacterial colonization of the interfaces was predominated by the family Oceanospirillaceae at all temperatures, demonstrating the wide temperature range of these hydrocarbonoclastic bacteria...
  5. Wan X, Dasilveira L, Hou S, Saito J, Donachie S. Draft Genome Sequence of Terasakiispira papahanaumokuakeensis PH27AT, a Spiral Bacterium from the Northwestern Hawaiian Islands. Genome Announc. 2016;4: pubmed publisher
    ..The strain's genome sequence may provide insights into the evolution of free-living Oceanospirillaceae.
  6. Goldberg S, Nelson C, Viviani D, Shulse C, Church M. Cascading influence of inorganic nitrogen sources on DOM production, composition, lability and microbial community structure in the open ocean. Environ Microbiol. 2017;19:3450-3464 pubmed publisher
    ..enrichments was more labile and stimulated growth of copiotrophic Gammaproteobacteria (Alteromonadaceae and Oceanospirillaceae) and Alphaproteobacteria (Rhodobacteraceae and Hyphomonadaceae) in weeklong dark incubations relative to ..
  7. Bertrand E, McCrow J, Moustafa A, Zheng H, McQuaid J, Delmont T, et al. Phytoplankton-bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge. Proc Natl Acad Sci U S A. 2015;112:9938-43 pubmed publisher
    ..The major contributor to cobalamin biosynthesis gene expression was a gammaproteobacterial population, Oceanospirillaceae ASP10-02a...
  8. Kristyanto S, Chaudhary D, Lee S, Kim J. Characterization of Marinomonas algicida sp. nov., a novel algicidal marine bacterium isolated from seawater. Int J Syst Evol Microbiol. 2017;67:4777-4784 pubmed publisher
    ..study, strain Yeongu 1-4T belongs to a novel species of the genus Marinomonas, within the family Oceanospirillaceae, for which the name Marinomonas algicida is proposed...
  9. Borsodi A, Korponai K, Schumann P, Sproer C, Felföldi T, Márialigeti K, et al. Nitrincola alkalilacustris sp. nov. and Nitrincola schmidtii sp. nov., alkaliphilic bacteria isolated from soda pans, and emended description of the genus Nitrincola. Int J Syst Evol Microbiol. 2017;: pubmed publisher
    ..gene based phylogenetic analysis showed that all three strains were members of the genus Nitrincola (family Oceanospirillaceae, class Gammaproteobacteria). Strain ZV-19T showed 96.6 and 95...

More Information

Publications55

  1. López Serrano D, Solano F, Sanchez Amat A. Identification of an operon involved in tyrosinase activity and melanin synthesis in Marinomonas mediterranea. Gene. 2004;342:179-87 pubmed
    ..mediterranea gene coding for the previously cloned polyphenol oxidase with laccase activity. This is the first demonstration of the tyrosinase gene forming part of an operon in a Gram-negative bacterium...
  2. Pinhassi J, Pujalte M, Pascual J, Gonzalez J, Lekunberri I, Pedrós Alió C, et al. Bermanella marisrubri gen. nov., sp. nov., a genome-sequenced gammaproteobacterium from the Red Sea. Int J Syst Evol Microbiol. 2009;59:373-7 pubmed publisher
    ..nov., sp. nov. is proposed. The type strain of Bermanella marisrubri is RED65(T) (=CECT 7074(T) =CCUG 52064(T))...
  3. Chen M, Sheu S, Chiu T, Chen W. Neptuniibacter halophilus sp. nov., isolated from a salt pan, and emended description of the genus Neptuniibacter. Int J Syst Evol Microbiol. 2012;62:1104-9 pubmed publisher
    ..The name proposed for this taxon is Neptuniibacter halophilus sp. nov.; the type strain is antisso-13(T) (?=?LMG 25378(T)?=?BCRC 80079(T)). An emended description of the genus Neptuniibacter is provided...
  4. Lee H, Shin N, Lee J, Roh S, Whon T, Bae J. Neptunomonas concharum sp. nov., isolated from a dead ark clam, and emended description of the genus Neptunomonas. Int J Syst Evol Microbiol. 2012;62:2657-61 pubmed publisher
    ..nov. is proposed. The type strain is LHW37(T) (=KACC 15543(T) =JCM 17730(T)). An emended description of the genus Neptunomonas is also provided...
  5. Miyazaki M, Nogi Y, Fujiwara Y, Kawato M, Kubokawa K, Horikoshi K. Neptunomonas japonica sp. nov., an Osedax japonicus symbiont-like bacterium isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan. Int J Syst Evol Microbiol. 2008;58:866-71 pubmed publisher
    ..The name Neptunomonas japonica sp. nov. (type strain JAMM 0745T=JCM 14595T=DSM 18939T) is proposed for the novel strains...
  6. Rong J, Liu M, Li Y, Sun T, Xie B, Shi M, et al. Insight into the genome sequence of a sediment-adapted marine bacterium Neptunomonas antarctica S3-22(T) from Antarctica. Mar Genomics. 2016;25:29-31 pubmed publisher
    ..The genome sequence of N. antarctica S3-22(T) may also provide further insights into the ecological role of the genus Neptunomonas. ..
  7. Chemburu S, Corbitt T, Ista L, Ji E, Fulghum J, Lopez G, et al. Light-induced biocidal action of conjugated polyelectrolytes supported on colloids. Langmuir. 2008;24:11053-62 pubmed publisher
    ..The light-induced biocidal activity is also correlated with a requirement for oxygen suggesting that interfacial generation of singlet oxygen is the crucial step in the light-induced biocidal activity...
  8. Miyazaki M, Nogi Y, Fujiwara Y, Kawato M, Nagahama T, Kubokawa K, et al. Amphritea japonica sp. nov. and Amphritea balenae sp. nov., isolated from the sediment adjacent to sperm whale carcasses off Kagoshima, Japan. Int J Syst Evol Microbiol. 2008;58:2815-20 pubmed publisher
    ..nov. (type strain JAMM 1866(T)=JCM 14782(T)=ATCC BAA-1530(T); reference strain JAMM 1548) and Amphritea balenae sp. nov. (type strain JAMM 1525(T)=JCM 14781(T)=ATCC BAA-1529(T)) are proposed...
  9. Su J, Zhou Y, Lai Q, Li X, Dong P, Yang X, et al. Sinobacterium caligoides gen. nov., sp. nov., a new member of the family Oceanospirillaceae isolated from the South China Sea, and emended description of Amphritea japonica. Int J Syst Evol Microbiol. 2013;63:2095-100 pubmed publisher
    ..Levels of similarity between strain SCSWE24(T) and type strains of recognized species in the family Oceanospirillaceae were less than 93%; the highest similarity was 92%, to both Amphritea japonica JAMM 1866(T) and '..
  10. Choi A, Cho J. Thalassolituus marinus sp. nov., a hydrocarbon-utilizing marine bacterium. Int J Syst Evol Microbiol. 2013;63:2234-8 pubmed publisher
    ..nov. is proposed, with IMCC1826(T) (=KCTC 23084(T)=NBRC 107590(T)) as the type strain...
  11. Krishna K, Bhumika V, Thomas M, Anil Kumar P, Srinivas T. Oceanospirillum nioense sp. nov., a marine bacterium isolated from sediment sample of Palk bay, India. Antonie Van Leeuwenhoek. 2013;103:1015-21 pubmed publisher
    ..gene sequence of strain NIO-S6(T) indicated Oceanospirillum linum and Oceanospirillum maris of the family Oceanospirillaceae (phylum Proteobacteria) are the closest related species with sequence similarities of 98.4 and 97...
  12. Bredemeier R, Hulsch R, Metzger J, Berthe Corti L. Submersed culture production of extracellular wax esters by the marine bacterium Fundibacter jadensis. Mar Biotechnol (NY). 2003;5:579-83 pubmed
    ..Tetradecane as a carbon source enhanced the spectrum of the wax ester composition...
  13. Krejcik Z, Denger K, Weinitschke S, Hollemeyer K, Paces V, Cook A, et al. Sulfoacetate released during the assimilation of taurine-nitrogen by Neptuniibacter caesariensis: purification of sulfoacetaldehyde dehydrogenase. Arch Microbiol. 2008;190:159-68 pubmed publisher
    ..The eight pathway genes were transcribed inducibly, which indicated expression of the whole hypothetical pathway. We presume that this pathway is one source of sulfoacetate in nature, where this compound is dissimilated by many bacteria...
  14. Arahal D, Lekunberri I, Gonzalez J, Pascual J, Pujalte M, Pedrós Alió C, et al. Neptuniibacter caesariensis gen. nov., sp. nov., a novel marine genome-sequenced gammaproteobacterium. Int J Syst Evol Microbiol. 2007;57:1000-6 pubmed
    ..demonstrated that this isolate is unique, showing <93 % sequence similarity to species of the families Oceanospirillaceae and Alteromonadaceae...
  15. Lucas Elio P, Gomez D, Solano F, Sanchez Amat A. The antimicrobial activity of marinocine, synthesized by Marinomonas mediterranea, is due to hydrogen peroxide generated by its lysine oxidase activity. J Bacteriol. 2006;188:2493-501 pubmed
    ..This is the first report on a bacterial lysine oxidase activity and the first time that a gene encoding this activity has been cloned...
  16. Ivanova E, Onyshchenko O, Christen R, Lysenko A, Zhukova N, Shevchenko L, et al. Marinomonas pontica sp. nov., isolated from the Black Sea. Int J Syst Evol Microbiol. 2005;55:275-9 pubmed
    ..1 %). The phylogenetic, genetic and physiological properties of the organism placed it within a novel species, proposed as Marinomonas pontica sp. nov., the type strain of which is 46-16T (=LMG 22531T=KMM 3492T=UCM 11075T)...
  17. Yoon J, Kang S, Oh T. Marinomonas dokdonensis sp. nov., isolated from sea water. Int J Syst Evol Microbiol. 2005;55:2303-7 pubmed
    ..On the basis of phenotypic data and phylogenetic and genetic distinctiveness, strains DSW10-10T (=KCTC 12394T=DSM 17202T) and DSW10-19 were placed in the genus Marinomonas as members of a novel species, Marinomonas dokdonensis sp. nov...
  18. Goffredi S, Orphan V, Rouse G, Jahnke L, Embaye T, Turk K, et al. Evolutionary innovation: a bone-eating marine symbiosis. Environ Microbiol. 2005;7:1369-78 pubmed
    ..Stable isotopes and fatty acid analyses suggest that these unusual endosymbionts are likely responsible for the nutrition of this locally abundant and reproductively prolific deep-sea worm...
  19. Teramoto M, Ohuchi M, Hatmanti A, Darmayati Y, Widyastuti Y, Harayama S, et al. Oleibacter marinus gen. nov., sp. nov., a bacterium that degrades petroleum aliphatic hydrocarbons in a tropical marine environment. Int J Syst Evol Microbiol. 2011;61:375-80 pubmed publisher
    ..nov., sp. nov. is proposed. The type strain of Oleibacter marinus is 2O1(T) (=NBRC 105760(T) =BTCC B-675(T))...
  20. Hassanshahian M, Emtiazi G, Caruso G, Cappello S. Bioremediation (bioaugmentation/biostimulation) trials of oil polluted seawater: a mesocosm simulation study. Mar Environ Res. 2014;95:28-38 pubmed publisher
    ..This result highlights the reduced biodegradation capability of the consortium used in this study, suggesting an unfavourable interaction between the two bacterial genera. ..
  21. Ngo H, Hong S, Hong M, Pham T, Oh D, Kang L. Expression, crystallization and preliminary X-ray crystallographic analysis of alcohol dehydrogenase (ADH) from Kangiella koreensis. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013;69:1037-40 pubmed publisher
    ..1, b = 80.9, c = 115.6?Å, ? = 111.9°. Four monomers were present in the asymmetric unit, with a corresponding VM of 2.55?Å(3)?Da(-1) and a solvent content of 51.8%...
  22. Kapustina N, Krasikova I, Isakov V, Gorshkova N, Solov eva T. Structure of lipid A from the marine gamma-proteobacterium Marinomonas vaga ATCC 27119T lipopolysaccharide. Biochemistry (Mosc). 2004;69:407-12 pubmed
    ..vaga lipid A from other ones...
  23. Jensen S, Ovreas L, Bergh O, Torsvik V. Phylogenetic analysis of bacterial communities associated with larvae of the Atlantic halibut propose succession from a uniform normal flora. Syst Appl Microbiol. 2004;27:728-36 pubmed
    ..Comparative analysis of bacterial communities from different geographical regions indicated that larvae of the Atlantic halibut possess a distinct and specific normal flora...
  24. Chen M, Sheu S, Chen C, Wang J, Chen W. Corallomonas stylophorae gen. nov., sp. nov., a halophilic bacterium isolated from the reef-building coral Stylophora pistillata. Int J Syst Evol Microbiol. 2013;63:982-8 pubmed publisher
    ..6 mol%. 16S rRNA gene sequence analysis indicated that strain KTSW-6(T) belongs to the family Oceanospirillaceae of the order Oceanospirillales, class Gammaproteobacteria. Strain KTSW-6(T) shared 92...
  25. Goral A, Tkaczuk K, Chruszcz M, Kagan O, Savchenko A, Minor W. Crystal structure of a putative isochorismatase hydrolase from Oleispira antarctica. J Struct Funct Genomics. 2012;13:27-36 pubmed publisher
    ..In silico docking results showed that despite small differences in active site composition, isochorismate binds to in the structure of OaIHL in a similar mode to its binding in phenazine biosynthesis protein PhzD (PDB code 1NF8)...
  26. Zhao R, Ji S, Wang Y, Yu T, Li Z, Li B, et al. Litoribacillus peritrichatus gen. nov. sp. nov., isolated from coastal sediment of an amphioxus breeding zone in Qingdao, China. Antonie Van Leeuwenhoek. 2013;103:357-66 pubmed publisher
    ..nov., sp. nov. is proposed. The type strain of Litoribacillus peritrichatus is JYr12(T) (=CGMCC 1.10796(T) = JCM17551(T))...
  27. Lemak S, Tchigvintsev A, Petit P, Flick R, Singer A, Brown G, et al. Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica. Biochem J. 2012;445:193-203 pubmed publisher
    ..The present study has provided insight into the molecular mechanisms of activity of a cold-active and anion-activated carboxyl esterase...
  28. Ferrer M, Chernikova T, Timmis K, Golyshin P. Expression of a temperature-sensitive esterase in a novel chaperone-based Escherichia coli strain. Appl Environ Microbiol. 2004;70:4499-504 pubmed
    ..This is the first report of successful use of a chaperone-based E. coli strain to express heat-labile recombinant proteins at temperatures below the theoretical minimum growth temperature of a common E. coli strain (7.5 degrees C)...
  29. Mahidhara G, Ch S, Ch V. Comparative metabolomic studies of Alkanivorax xenomutans showing differential power output in a three chambered microbial fuel cell. World J Microbiol Biotechnol. 2017;33:102 pubmed publisher
    ..Hence, the presence of anoxic conditions governed the electrogenic bacteria to produce enhanced power output by modulating differential metabolomic profiling, compared to the culture grown in oxic conditions. ..
  30. Hyeon J, Kim K, Chun B, Jeon C. Pontibacterium granulatum gen. nov., sp. nov., isolated from a tidal flat. Int J Syst Evol Microbiol. 2017;67:3784-3790 pubmed publisher
    ..that strain A-1T formed a distinct phylogenetic lineage from other genera within the family Oceanospirillaceae. Strain A-1T shared low 16S rRNA gene sequence similarities with other taxa (?94.9?%)...
  31. Sidhu C, Thakur S, Sharma G, Tanuku N, Pinnaka A. Oceanospirillum sanctuarii sp. nov., isolated from a sediment sample. Int J Syst Evol Microbiol. 2017;67:3428-3434 pubmed publisher
    ..nov. is proposed. The type strain of Oceanospirillumsanctuarii is AK56T (=MTCC 12005T=JCM 19193T=KCTC 52973T)...
  32. Sosa O, Repeta D, Ferrón S, Bryant J, Mende D, Karl D, et al. Isolation and Characterization of Bacteria That Degrade Phosphonates in Marine Dissolved Organic Matter. Front Microbiol. 2017;8:1786 pubmed publisher
    ..closely related to Sulfitobacter and close relatives of hydrocarbon-degrading bacteria of the Oceanospirillaceae family, many of which encoded phosphonate degradation pathways...
  33. Satomi M, Kimura B, Hayashi M, Okuzumi M, Fujii T. Marinospirillum insulare sp. nov., a novel halophilic helical bacterium isolated from kusaya gravy. Int J Syst Evol Microbiol. 2004;54:163-7 pubmed
    ..minutulum and M. megaterium, supporting the phylogenetic conclusion. Thus, a novel species is proposed: Marinospirillum insulare sp. nov. (type strain, KT=LMG 21802T=NBRC 100033T)...
  34. Vandieken V, Thamdrup B. Identification of acetate-oxidizing bacteria in a coastal marine surface sediment by RNA-stable isotope probing in anoxic slurries and intact cores. FEMS Microbiol Ecol. 2013;84:373-86 pubmed publisher
    ..Members of the Oceanospirillaceae were identified as (13) C-acetate oxidizers in both types of incubations, but bacteria related to Colwellia ..
  35. Liu A, Zhang X, Chen C, Xie B, Qin Q, Liu C, et al. Neptunomonas qingdaonensis sp. nov., isolated from intertidal sand. Int J Syst Evol Microbiol. 2013;63:1673-7 pubmed publisher
    ..nov. is proposed. The type strain is P10-2-4(T) (?=?CGMCC 1.10971(T) ?=?KCTC 23686(T))...
  36. Fekry M, Tipton P, Gates K. Kinetic consequences of replacing the internucleotide phosphorus atoms in DNA with arsenic. ACS Chem Biol. 2011;6:127-30 pubmed publisher
    ..Overcoming such dramatic kinetic instability in its genetic material would present serious challenges to Halomonadacea GFAJ-1...
  37. Zhang X, Zhang Y, Yu Y, Li H, Gao Z, Chen X, et al. Neptunomonas antarctica sp. nov., isolated from marine sediment. Int J Syst Evol Microbiol. 2010;60:1958-61 pubmed publisher
    ..Based on the evidence from our polyphasic study, strain S3-22T represents a novel Neptunomonas species, for which the name Neptunomonas antarctica sp. nov. is proposed. The type strain is S3-22T (=CCTCC AB 209086T =KACC 14056T)...
  38. Gupta P, Chaturvedi P, Pradhan S, Delille D, Shivaji S. Marinomonas polaris sp. nov., a psychrohalotolerant strain isolated from coastal sea water off the subantarctic Kerguelen islands. Int J Syst Evol Microbiol. 2006;56:361-4 pubmed
    ..nov. is proposed. The type strain is CK13T (=MTCC 6645T=DSM 16579T=JCM 12522T)...
  39. Prabagaran S, Suresh K, Manorama R, Delille D, Shivaji S. Marinomonas ushuaiensis sp. nov., isolated from coastal sea water in Ushuaia, Argentina, sub-Antarctica. Int J Syst Evol Microbiol. 2005;55:309-13 pubmed
    ..Strain U1T, therefore, represents a novel species, for which the name Marinomonas ushuaiensis sp. nov. is proposed. The type strain of M. ushuaiensis is U1T (=MTCC 6143T=DSM 15871T=JCM 12170T)...
  40. Singh A, Vaidya B, Tanuku N, Pinnaka A. Nitrincola nitratireducens sp. nov. isolated from a haloalkaline crater lake. Syst Appl Microbiol. 2015;38:555-62 pubmed publisher
    ..nov. is proposed. The type strain of N. nitratireducens is AK23(T) (=JCM 18788(T)=MTCC 11628(T)). ..
  41. Mason O, Hazen T, Borglin S, Chain P, Dubinsky E, Fortney J, et al. Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill. ISME J. 2012;6:1715-27 pubmed publisher
    ..These data point towards a rapid response of members of the Oceanospirillales to aliphatic hydrocarbons in the deep sea...
  42. Vandieken V, Pester M, Finke N, Hyun J, Friedrich M, Loy A, et al. Three manganese oxide-rich marine sediments harbor similar communities of acetate-oxidizing manganese-reducing bacteria. ISME J. 2012;6:2078-90 pubmed publisher
    ..bacteria: 16S rRNA of members of the genera Colwellia and Arcobacter and of novel genera within the Oceanospirillaceae and Alteromonadales were detected in heavy RNA-SIP fractions from these three sediments...
  43. Wang Y, Yu M, Austin B, Zhang X. Oleispira lenta sp. nov., a novel marine bacterium isolated from Yellow sea coastal seawater in Qingdao, China. Antonie Van Leeuwenhoek. 2012;101:787-94 pubmed publisher
    ..nov. is proposed, with the type strain DFH11(T) (=NCIMB 14529(T) = LMG 24829(T))...
  44. Nagashima H, Zulkharnain A, Maeda R, Fuse H, Iwata K, Omori T. Cloning and nucleotide sequences of carbazole degradation genes from marine bacterium Neptuniibacter sp. strain CAR-SF. Curr Microbiol. 2010;61:50-6 pubmed publisher
    ..This is the first report of genes involved in carbazole degradation isolated from a marine bacterium...
  45. Namsaraev Z, Akimov V, Tsapin A, Barinova E, Nealson K, Gorlenko V. Marinospirillum celere sp. nov., a novel haloalkaliphilic, helical bacterium isolated from Mono Lake. Int J Syst Evol Microbiol. 2009;59:2329-32 pubmed publisher
    ..both strains were shown to be related closely to the members of the genus Marinospirillum (family Oceanospirillaceae, class Gammaproteobacteria)...
  46. Vorob eva E, Dmitrenok A, Dmitrenok P, Isakov V, Krasikova I, Solov eva T. [The structure of uncommon lipid A from the marine bacterium Marinomonas communis ATCC 27118T]. Bioorg Khim. 2005;31:404-13 pubmed
    ..communis lipid A in comparison with those of terrestrial bacteria may be of pharmacological interest. The potential physiological meaning of this lipid A and compounds of similar structure are discussed...