Summary: A family of phototrophic bacteria, in the order Rhodospirillales, isolated from stagnant water and mud.

Top Publications

  1. Herasimenka Y, Cescutti P, Impallomeni G, Rizzo R. Exopolysaccharides produced by Inquilinus limosus, a new pathogen of cystic fibrosis patients: novel structures with usual components. Carbohydr Res. 2007;342:2404-15 pubmed
    ..Inspection of possible local conformations assumed by the two polysaccharide chains showed features, which might provide interesting clues for understanding structure-function relationships...
  2. Klamt S, Grammel H, Straube R, Ghosh R, Gilles E. Modeling the electron transport chain of purple non-sulfur bacteria. Mol Syst Biol. 2008;4:156 pubmed publisher
    Purple non-sulfur bacteria (Rhodospirillaceae) have been extensively employed for studying principles of photosynthetic and respiratory electron transport phosphorylation and for investigating the regulation of gene expression in ..
  3. Zhang G, Hwang C, Cho B. Thalassobaculum litoreum gen. nov., sp. nov., a member of the family Rhodospirillaceae isolated from coastal seawater. Int J Syst Evol Microbiol. 2008;58:479-85 pubmed publisher
    ..Analyses of the 16S rRNA gene sequence revealed that strain CL-GR58(T) belonged to the family Rhodospirillaceae with Azospirillum lipoferum as its closest relative (gene sequence similarity of 90.9 %)...
  4. Williams T, Lefèvre C, Zhao W, Beveridge T, Bazylinski D. Magnetospira thiophila gen. nov., sp. nov., a marine magnetotactic bacterium that represents a novel lineage within the Rhodospirillaceae (Alphaproteobacteria). Int J Syst Evol Microbiol. 2012;62:2443-50 pubmed publisher
    ..Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain MMS-1(T) belongs to the family Rhodospirillaceae within the Alphaproteobacteria, and is distantly related to species of the genus Magnetospirillum...
  5. Ghosh M, Pulicherla K, Rekha V, Raja P, Sambasiva Rao K. Cold active ?-galactosidase from Thalassospira sp. 3SC-21 to use in milk lactose hydrolysis: a novel source from deep waters of Bay-of-Bengal. World J Microbiol Biotechnol. 2012;28:2859-69 pubmed publisher
    ..5 at 20 °C in comparison to 40 % of lactose hydrolysis at 40 °C, suggesting that the cold active ?-galactosidase from Thalassospira sp. 3SC-21 would be best suited for manufacturing the lactose free dairy products at low temperature...
  6. Bazylinski D, Williams T, Lefèvre C, Trubitsyn D, Fang J, Beveridge T, et al. Magnetovibrio blakemorei gen. nov., sp. nov., a magnetotactic bacterium (Alphaproteobacteria: Rhodospirillaceae) isolated from a salt marsh. Int J Syst Evol Microbiol. 2013;63:1824-33 pubmed publisher
    ..Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain MV-1(T) belongs to the family Rhodospirillaceae within the Alphaproteobacteria, but is not closely related to the genus Magnetospirillum...
  7. Oh D, Strangman W, Kauffman C, Jensen P, Fenical W. Thalassospiramides A and B, immunosuppressive peptides from the marine bacterium Thalassospira sp. Org Lett. 2007;9:1525-8 pubmed
  8. Ross A, Xu Y, Lu L, Kersten R, Shao Z, Al Suwailem A, et al. Biosynthetic multitasking facilitates thalassospiramide structural diversity in marine bacteria. J Am Chem Soc. 2013;135:1155-62 pubmed publisher
  9. Choi D, Hwang C, Cho B. Pelagibius litoralis gen. nov., sp. nov., a marine bacterium in the family Rhodospirillaceae isolated from coastal seawater. Int J Syst Evol Microbiol. 2009;59:818-23 pubmed publisher
    ..16S rRNA gene sequence analysis revealed a clear affiliation of this novel strain with the family Rhodospirillaceae. Strain CL-UU02(T) formed a robust cluster with the type strains of species of the genus Rhodovibrio at 16S ..

More Information

Publications130 found, 100 shown here

  1. Tanimura Y, Fukumori Y. Heme-copper oxidase family structure of Magnetospirillum magnetotacticum 'cytochrome a1'-like hemoprotein without cytochrome c oxidase activity. J Inorg Biochem. 2000;82:73-8 pubmed
    ..However, none of the amino acid residues which were proposed to participate in the oxygen-reducing and the coupled proton pumping reactions in cytochrome c oxidase were at all conserved in the hemoprotein. ..
  2. Leyland M, Kelly D. Purification and characterization of a monomeric isocitrate dehydrogenase with dual coenzyme specificity from the photosynthetic bacterium Rhodomicrobium vannielii. Eur J Biochem. 1991;202:85-93 pubmed
    ..The results suggested a relationship between the Rm. vannielii enzyme and the monomeric isocitrate dehydrogenase isoenzyme II from Vibrio ABE-1. ..
  3. Matsunaga T, Togo H, Kikuchi T, Tanaka T. Production of luciferase-magnetic particle complex by recombinant Magnetospirillum sp. AMB-1. Biotechnol Bioeng. 2000;70:704-9 pubmed
    ..Magnetite production by fed-batch culture of AMB-1 was about 3 times that obtained by batch culture. There were no significant differences in BMPs yield between recombinant AMB-1 cultivated by fed-batch culture and wild type of AMB-1. ..
  4. Nogi Y, Yoshizumi M, Miyazaki M. Thalassospira povalilytica sp. nov., a polyvinyl-alcohol-degrading marine bacterium. Int J Syst Evol Microbiol. 2014;64:1149-53 pubmed publisher
    ..nov. (type strain Zumi 95(T)?=?JCM 18746(T)?=?DSM 26719(T)) is proposed. ..
  5. Cerqueira T, Pinho D, Froufe H, Santos R, Bettencourt R, Egas C. Sediment Microbial Diversity of Three Deep-Sea Hydrothermal Vents Southwest of the Azores. Microb Ecol. 2017;74:332-349 pubmed publisher
    ..mostly at Lucky Strike and Rainbow sites and affiliated with the bacterial clades JTB255, Sh765B-TzT-29, Rhodospirillaceae and OCS155 marine group and with the archaeal Marine Group I...
  6. Meyer T, Van Driessche G, Ambler R, Kyndt J, Devreese B, Van Beeumen J, et al. Evidence from the structure and function of cytochromes c(2) that nonsulfur purple bacterial photosynthesis followed the evolution of oxygen respiration. Arch Microbiol. 2010;192:855-65 pubmed publisher
    ..Based upon our analysis, we propose that the involvement of C2 in nonsulfur purple bacterial photosynthesis was a metabolic feature subsequent to the evolution of oxygen respiration. ..
  7. Kawamura Y, Fujiwara N, Naka T, Mitani A, Kubota H, Tomida J, et al. Genus Enhydrobacter Staley et al. 1987 should be recognized as a member of the family Rhodospirillaceae within the class Alphaproteobacteria. Microbiol Immunol. 2012;56:21-6 pubmed publisher
    ..analysis of our 16S rRNA sequence data revealed that these organisms were located within the family Rhodospirillaceae. The genera Inquilinus, Oceanibaculum, Skermanella and Nisaea were closely related (sequence similarities ..
  8. Amoozegar M, Makhdoumi Kakhki A, Ramezani M, Nikou M, Fazeli S, Schumann P, et al. Limimonas halophila gen. nov., sp. nov., an extremely halophilic bacterium in the family Rhodospirillaceae. Int J Syst Evol Microbiol. 2013;63:1562-7 pubmed publisher
    ..Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain IA16(T) belonged in the family Rhodospirillaceae and that its closest relatives were Rhodovibrio sodomensis DSM 9895(T) (91...
  9. Agalidis H, Reiss Husson F. Resolution of Rhodocyclus gelatinosus photoreceptor unit components by temperature-induced phase separation in the presence of decyltetraoxyethylene. Biochem Biophys Res Commun. 1991;177:1107-12 pubmed
    ..This method provided a first step towards further purification of reaction centers and B875 antenna, respectively...
  10. Calugay R, Miyashita H, Okamura Y, Matsunaga T. Siderophore production by the magnetic bacterium Magnetospirillum magneticum AMB-1. FEMS Microbiol Lett. 2003;218:371-5 pubmed
    ..magneticum AMB-1 for the assimilation of large amounts of iron accounts for the rapid depletion of iron in the medium, thereby triggering siderophore excretion. M. magneticum AMB-1 produces both hydroxamate and catechol siderophores. ..
  11. Tsubouchi T, Ohta Y, Haga T, Usui K, Shimane Y, Mori K, et al. Thalassospira alkalitolerans sp. nov. and Thalassospira mesophila sp. nov., isolated from a decaying bamboo sunken in the marine environment, and emended description of the genus Thalassospira. Int J Syst Evol Microbiol. 2014;64:107-15 pubmed publisher
    ..nov. are proposed. The type strains are MBE#61(T) (?=?JCM 18968(T)?=?CECT 8273(T)) and MBE#74(T) (?=?JCM 18969(T)?=?CECT 8274(T)), respectively. An emended description of the genus Thalassospira is also proposed. ..
  12. Yang C, Takeyama H, Tanaka T, Hasegawa A, Matsunaga T. Synthesis of bacterial magnetic particles during cell cycle of Magnetospirillum magneticum AMB-1. Appl Biochem Biotechnol. 2001;91-93:155-60 pubmed
    ..A sharp increase in BMPs occurred just before cell division and resulted in maximum BMP production of 30 particles/cell. The transcription of magA was regulated immediately before and after cell division. ..
  13. Huang X, Dong W, Wang H, Jiang S. Biological nutrient removal and molecular biological characteristics in an anaerobic-multistage anaerobic/oxic (A-MAO) process to treat municipal wastewater. Bioresour Technol. 2017;241:969-978 pubmed publisher
    ..Nitrosomonas and Nitrospira occupied a dominant position in AOB and NOB, respectively. Rhodospirillaceae and Rhodocyclaceae owned a considerable proportion in phosphorus removal bacteria...
  14. Pulicherla K, Kumar P, Manideep K, Rekha V, Ghosh M, Sambasiva Rao K. Statistical approach for the enhanced production of cold-active ?-galactosidase from Thalassospira frigidphilosprofundus: a novel marine psychrophile from deep waters of Bay of Bengal. Prep Biochem Biotechnol. 2013;43:766-80 pubmed publisher
  15. Oda K, Tanskul S, Oyama H, Noparatnaraporn N. Purification and characterization of alkaline serine proteinase from photosynthetic bacterium, Rubrivivax gelatinosus KDDS1. Biosci Biotechnol Biochem. 2004;68:650-5 pubmed
    ..Thus, the enzyme from Rvi. gelatinosus KDDS1 was thought to be a serine-type proteinase. This was the first serine proteinase characterized from photosynthetic bacteria. ..
  16. Kuttel M, Ravenscroft N, Foschiatti M, Cescutti P, Rizzo R. Conformational properties of two exopolysaccharides produced by Inquilinus limosus, a cystic fibrosis lung pathogen. Carbohydr Res. 2012;350:40-8 pubmed publisher
    ..In contrast, the mannan forms rigid regular 'bottlebrush' helices with a minimal central cavity. The widely different character of these two polymers suggests a possible differentiation of biological roles. ..
  17. Rekha V, Ghosh M, Adapa V, Oh S, Pulicherla K, Sambasiva Rao K. Optimization of polygalacturonase production from a newly isolated Thalassospira frigidphilosprofundus to use in pectin hydrolysis: statistical approach. Biomed Res Int. 2013;2013:750187 pubmed publisher
    ..frigidphilosprofundus through the central composite design. Results indicated 80% degradation of pectin in banana fiber at 20 °C in 120 min, suggesting the scope of cold active PGase usage in the treatment of raw banana fibers. ..
  18. Wahyudi A, Takeyama H, Okamura Y, Fukuda Y, Matsunaga T. Characterization of aldehyde ferredoxin oxidoreductase gene defective mutant in Magnetospirillum magneticum AMB-1. Biochem Biophys Res Commun. 2003;303:223-9 pubmed
    ..These results indicate that AOR may contribute to ferric iron reduction during BMP synthesis in M. magneticum AMB-1 under microaerobic respiration. ..
  19. Lv C, Zhao C, Yang S, Qu Y. [Arsenic metabolism in purple nonsulfur bacteria]. Wei Sheng Wu Xue Bao. 2012;52:1497-507 pubmed
    ..Our investigations shed light on the evolution and functional implications in arsenic gene clusters of PNSB, and support the notion that arsenate reduction and arsenite methylation appears to be the dominant process in PNSB. ..
  20. Osyczka A, Nagashima K, Shimada K, Matsuura K. Interaction site for high-potential iron-sulfur protein on the tetraheme cytochrome subunit bound to the photosynthetic reaction center of Rubrivivax gelatinosus. Biochemistry. 1999;38:2861-5 pubmed
  21. Wong M, Tan F, Ng W, Liu W. Identification and occurrence of tetrad-forming Alphaproteobacteria in anaerobic-aerobic activated sludge processes. Microbiology. 2004;150:3741-8 pubmed
    ..However, these 'Defluvicoccus'-related TFOs were only seen in low abundance in 12 different EBPR and non-EBPR systems, suggesting that they were not the key populations responsible for the deterioration of full-scale EBPR processes. ..
  22. Anil Kumar P, Srinivas T, Takaichi S, Maoka T, Sasikala C, Ramana C. Phaeospirillum chandramohanii sp. nov., a phototrophic alphaproteobacterium with carotenoid glycosides. Int J Syst Evol Microbiol. 2009;59:2089-93 pubmed publisher
    ..nov. is proposed. The type strain is JA145T (=JCM 14933T=KCTC 5703T=NBRC 104961T). ..
  23. Luo G, Shi Z, Wang H, Wang G. Skermanella stibiiresistens sp. nov., a highly antimony-resistant bacterium isolated from coal-mining soil, and emended description of the genus Skermanella. Int J Syst Evol Microbiol. 2012;62:1271-6 pubmed publisher
    ..nov. is proposed. The type strain is SB22(T) ( = CGMCC 1.10751(T) = KCTC 23364(T)). An emended description of the genus Skermanella is provided. ..
  24. Labadie C, Ginies C, Guinebretiere M, Renard C, Cerutti C, Carlin F. Hydrosols of orange blossom (Citrus aurantium), and rose flower (Rosa damascena and Rosa centifolia) support the growth of a heterogeneous spoilage microbiota. Food Res Int. 2015;76:576-586 pubmed publisher
    ..Burkholderia cepacia complex, and presumably two new genera belonging to Acetobacteraceae and Rhodospirillaceae. Among those bacteria, Burkholderia vietnamiensis and Novosphingobium capsulatum were able to metabolize ..
  25. Kompantseva E, Komova A, Kostrikina N. Rhodovulum steppense sp. nov., an obligately haloalkaliphilic purple nonsulfur bacterium widespread in saline soda lakes of Central Asia. Int J Syst Evol Microbiol. 2010;60:1210-4 pubmed publisher
    ..0 %). The major quinone was Q-10. The DNA G+C content was 66.1 mol% (T(m)). The type strain, A-20s(T) (=VKM B-2489(T) =DSM 21153(T)), was isolated from soda lake Khilganta (Zabaikal'skii Krai, southern Siberia, Russia)...
  26. Kniggendorf A, Gaul T, Meinhardt Wollweber M. Effects of ethanol, formaldehyde, and gentle heat fixation in confocal resonance Raman microscopy of purple nonsulfur bacteria. Microsc Res Tech. 2011;74:177-83 pubmed publisher
  27. Hädicke O, Grammel H, Klamt S. Metabolic network modeling of redox balancing and biohydrogen production in purple nonsulfur bacteria. BMC Syst Biol. 2011;5:150 pubmed publisher
  28. Wang L, Li J, Yang F, E Y, Raza W, Huang Q, et al. Application of Bioorganic Fertilizer Significantly Increased Apple Yields and Shaped Bacterial Community Structure in Orchard Soil. Microb Ecol. 2017;73:404-416 pubmed publisher
    ..Two groups, Lysobacter and Rhodospirillaceae, were found to be the significantly increased by the BOF addition and the genus Lysobacter may identify ..
  29. Wang Y, Zhang T, Lin W, Zhang B, Cai Y, Yang C, et al. Complete Genome Sequence of Magnetospirillum sp. Strain XM-1, Isolated from the Xi'an City Moat, China. Genome Announc. 2016;4: pubmed publisher
    ..strain XM-1 was recently isolated from the Xi'an City moat, China. It belongs to the Rhodospirillaceae family in the Alphaproteobacteria class. Here, we report the complete genome sequence of XM-1...
  30. Takaichi S, Maoka T, Sasikala C, Ramana C, Shimada K. Genus specific unusual carotenoids in purple bacteria, Phaeospirillum and Roseospira: structures and biosyntheses. Curr Microbiol. 2011;63:75-80 pubmed publisher
    ..The study concludes in identifying genus specific unusual carotenoids, which is probably due to characteristic nature of some carotenogenesis enzymes. ..
  31. Okamura Y, Takeyama H, Matsunaga T. A magnetosome-specific GTPase from the magnetic bacterium Magnetospirillum magneticum AMB-1. J Biol Chem. 2001;276:48183-8 pubmed
    ..Furthermore, addition of the GTPase inhibitor AlF(4)- also inhibited magnetic particle synthesis, suggesting that GTPase is required for magnetic particles synthesis. ..
  32. Ding L, Su J, Sun G, Wu J, Wei W. Increased microbial functional diversity under long-term organic and integrated fertilization in a paddy soil. Appl Microbiol Biotechnol. 2018;102:1969-1982 pubmed publisher
    ..in the NPKR and L-NPKR treatments, with enrichment of certain groups including Bradyrhizobiaceae and Rhodospirillaceae families that benefit higher productivity...
  33. Raj P, Chakravarthy S, Ramaprasad E, Sasikala C, Ramana C. Phaeospirillum tilakii sp. nov., a phototrophic alphaproteobacterium isolated from aquatic sediments. Int J Syst Evol Microbiol. 2012;62:1069-74 pubmed publisher
    ..analysis showed that the strains clustered with species of the genus Phaeospirillum of the family Rhodospirillaceae, class Alphaproteobacteria...
  34. Cornet J, Favier L, Dussap C. Modeling stability of photoheterotrophic continuous cultures in photobioreactors. Biotechnol Prog. 2003;19:1216-27 pubmed
    ..The robustness of the proposed model allows the engineering operating domain of the photobioreactor function to be set and offers a promising tool for the design and control of such photoheterotrophic processes. ..
  35. Gall A, Henry S, Takaichi S, Robert B, Cogdell R. Preferential incorporation of coloured-carotenoids occurs in the LH2 complexes from non-sulphur purple bacteria under carotenoid-limiting conditions. Photosynth Res. 2005;86:25-35 pubmed
    ..The results show that although the presence of Car molecules is important for the stability of the LH2 complexes that the overall native structure can be maintained by the presence of many different Cars. ..
  36. Okamura K, Hisada T, Hiraishi A. Characterization of thermotolerant purple nonsulfur bacteria isolated from hot-spring Chloroflexus mats and the reclassification of "Rhodopseudomonas cryptolactis" Stadtwald-Demchick et al.1990 as Rhodoplanes cryptolactis nom. rev., comb. n. J Gen Appl Microbiol. 2007;53:357-61 pubmed
  37. Abreu F, Sousa A, Aronova M, Kim Y, Cox D, Leapman R, et al. Cryo-electron tomography of the magnetotactic vibrio Magnetovibrio blakemorei: insights into the biomineralization of prismatic magnetosomes. J Struct Biol. 2013;181:162-8 pubmed publisher
    ..Our data suggest fundamental differences between prismatic and octahedral magnetosomes in their mechanisms of nucleation and crystal growth as well as in their structural relationships with the cytoplasm and plasma membrane. ..
  38. Degli Esposti M. A Journey across Genomes Uncovers the Origin of Ubiquinone in Cyanobacteria. Genome Biol Evol. 2017;9:3039-3053 pubmed publisher
    ..and then diversified in anaerobic alpha proteobacteria which have extant relatives in members of the Rhodospirillaceae family...
  39. Dahal R, Kim J. Ferrovibrio soli sp. nov., a novel cellulolytic bacterium isolated from stream bank soil. Int J Syst Evol Microbiol. 2017;: pubmed publisher
    ..on its 16S rRNA gene sequences indicated that strain A15T formed a lineage within the family Rhodospirillaceae of the phylum Proteobacteria which was distinct from Ferrovibrio denitrificans S3T (98...
  40. Schultheiss D, Schüler D. Development of a genetic system for Magnetospirillum gryphiswaldense. Arch Microbiol. 2003;179:89-94 pubmed
    ..gryphiswaldense. Several antibiotic resistance markers that can be expressed in M. gryphiswaldense were identified. Tn 5 transposons delivered on a suicide plasmid showed transpositional insertion into random chromosomal sites. ..
  41. Archana A, Sasikala C, Ramana C, Arunasri K. "Paraffin wax-overlay of pour plate", a method for the isolation and enumeration of purple non-sulfur bacteria. J Microbiol Methods. 2004;59:423-5 pubmed
    ..The total count of PNSB ranged from 10(5)-10(8) CFU g dry soil(-1) and belonged to the genera of Rhodobacter, Rhodopseudomonas, Rhodocista and Rubrivivax. ..
  42. Honda R, Fukushi K, Yamamoto K. Optimization of wastewater feeding for single-cell protein production in an anaerobic wastewater treatment process utilizing purple non-sulfur bacteria in mixed culture condition. J Biotechnol. 2006;125:565-73 pubmed
    ..Consequently, feeding in the morning is the optimum feed-timing control from the aspects of growth of purple non-sulfur bacteria and single-cell protein production. ..
  43. Foschiatti M, Cescutti P, Tossi A, Rizzo R. Inhibition of cathelicidin activity by bacterial exopolysaccharides. Mol Microbiol. 2009;72:1137-46 pubmed publisher
    ..A model is proposed where peptides with an alpha-helical conformation interact with exopolysaccharides through electrostatic and other non-covalent interactions. ..
  44. Wang Y, Liu J, Zhang X, Chen Y, Wang Z, Chen Y, et al. Fodinicurvata sediminis gen. nov., sp. nov. and Fodinicurvata fenggangensis sp. nov., poly-beta-hydroxybutyrate-producing bacteria in the family Rhodospirillaceae. Int J Syst Evol Microbiol. 2009;59:2575-81 pubmed publisher
    ..on 16S rRNA gene sequences indicated that strains YIM D82(T) and YIM D812(T) were members of the family Rhodospirillaceae and showed 90.5-90.6 % and 90.1-90...
  45. Picardal F, Zaybak Z, Chakraborty A, Schieber J, Szewzyk U. Microaerophilic, Fe(II)-dependent growth and Fe(II) oxidation by a Dechlorospirillum species. FEMS Microbiol Lett. 2011;319:51-7 pubmed publisher
  46. Lopez Lopez A, Pujalte M, Benlloch S, Mata Roig M, Rossello Mora R, Garay E, et al. Thalassospira lucentensis gen. nov., sp. nov., a new marine member of the alpha-Proteobacteria. Int J Syst Evol Microbiol. 2002;52:1277-83 pubmed
    ..This report describes the classification of strain QMT2T (= DSM 14000T = CECT 5390T) as a new genus and species, Thalassospira lucentensis gen. nov, sp. nov., in the family Rhodospirillaceae.
  47. Markov S, Weaver P. Bioreactors for H2 production by purple nonsulfur bacteria. Appl Biochem Biotechnol. 2008;145:79-86 pubmed publisher
    ..Up to 140 ml g cdw(-1) h(-1) of H(2) production activity was observed using this bioreactor for more than 10 days. ..
  48. Lai Q, Yuan J, Wu C, Shao Z. Oceanibaculum indicum gen. nov., sp. nov., isolated from deep seawater of the Indian Ocean. Int J Syst Evol Microbiol. 2009;59:1733-7 pubmed publisher
    ..similarity); levels of similarity between strain P24(T) and type strains of recognized species in the family Rhodospirillaceae were all less than 90.8 %...
  49. Nittami T, McIlroy S, Seviour E, Schroeder S, Seviour R. Candidatus Monilibacter spp., common bulking filaments in activated sludge, are members of Cluster III Defluviicoccus. Syst Appl Microbiol. 2009;32:480-9 pubmed publisher
  50. Tsukimoto M, Nagaoka M, Shishido Y, Fujimoto J, Nishisaka F, Matsumoto S, et al. Bacterial production of the tunicate-derived antitumor cyclic depsipeptide didemnin B. J Nat Prod. 2011;74:2329-31 pubmed publisher
    ..A favorable strategy for the production of such compounds is to use culturable microorganisms. Here we report that didemnin B, a tunicate-derived depsipeptide, has been isolated from a culturable bacterium, Tistrella mobilis YIT 12409...
  51. Kim D, Lee H, Kim H, Kim S, Ka J. Dongia soli sp. nov., isolated from soil from Dokdo, Korea. Antonie Van Leeuwenhoek. 2016;109:1397-402 pubmed publisher
    ..7 mol%. Based on the phenotypic, genotypic and chemotaxonomic data, strain D78(T) represents a novel species in the genus Dongia, for which the name Dongia soli sp. nov. (=KACC 13941(T) =LMG 29193(T)) is proposed. ..
  52. Matsunaga T, Tsujimura N, Okamura Y, Takeyama H. Cloning and characterization of a gene, mpsA, encoding a protein associated with intracellular magnetic particles from Magnetospirillum sp. strain AMB-1. Biochem Biophys Res Commun. 2000;268:932-7 pubmed
    ..Although the function of MpsA remains unknown, homology searches suggest similarity with the alpha subunit of acetyl-CoA carboxylase and the CoA-binding motif. ..
  53. Bazylinski D, Dean A, Schuler D, Phillips E, Lovley D. N2-dependent growth and nitrogenase activity in the metal-metabolizing bacteria, Geobacter and Magnetospirillum species. Environ Microbiol. 2000;2:266-73 pubmed
    ..The evidence presented here shows that members of the metal-metabolizing genera, Geobacter and Magnetospirillum, fix atmospheric dinitrogen. ..
  54. Okamura Y, Takeyama H, Sekine T, Sakaguchi T, Wahyudi A, Sato R, et al. Design and application of a new cryptic-plasmid-based shuttle vector for Magnetospirillum magneticum. Appl Environ Microbiol. 2003;69:4274-7 pubmed
    ..An electroporation method for magnetic bacteria that uses the cryptic plasmid was also developed...
  55. Sasaki K, Watanabe M, Suda Y, Ishizuka A, Noparatnaraporn N. Applications of photosynthetic bacteria for medical fields. J Biosci Bioeng. 2005;100:481-8 pubmed
    ..Furthermore, the feasible application of a biopolymer consisting of RNA from a photosynthetic bacterium as a drug delivery system (DDS) to cancer treatment is described. ..
  56. Liu C, Wu Y, Li L, Ma Y, Shao Z. Thalassospira xiamenensis sp. nov. and Thalassospira profundimaris sp. nov. Int J Syst Evol Microbiol. 2007;57:316-20 pubmed
    ..nov. (type strain, M-5T=DSM 17429T=CGMCC 1.3998T) and Thalassospira profundimaris sp. nov. (type strain, WP0211T=DSM 17430T=CGMCC 1.3997T) are proposed. ..
  57. Lai Q, Shao Z. Genome sequence of Oceanibaculum indicum type strain P24. J Bacteriol. 2012;194:6942 pubmed publisher
    ..Here we present the draft genome of strain P24(T), which contains 3,952,792 bp with a G+C content of 65.5% and contains 3,755 protein-coding genes and 45 tRNAs. ..
  58. Kranz R, Pace V, Caldicott I. Inactivation, sequence, and lacZ fusion analysis of a regulatory locus required for repression of nitrogen fixation genes in Rhodobacter capsulatus. J Bacteriol. 1990;172:53-62 pubmed
    ..capsulatus nif genes. Repression of nif genes in response to oxygen was still present in R. capsulatus glnB mutants and must have occurred at a different level of control in the regulatory circuit. ..
  59. Zhang D, Yang H, Zhang W, Huang Z, Liu S. Rhodocista pekingensis sp. nov., a cyst-forming phototrophic bacterium from a municipal wastewater treatment plant. Int J Syst Evol Microbiol. 2003;53:1111-4 pubmed
    ..The major cellular quinone was Q-9. The DNA G + C content of cells was 68.8 mol%. The type strain of Rhodocista pekingensis is 3-pT (=AS 1.2194T=JCM 11689T). ..
  60. Lai Q, Shao Z. Genome sequence of Thalassospira xiamenensis type strain M-5. J Bacteriol. 2012;194:6957 pubmed publisher
    ..Here, we present the draft genome of strain M-5(T), which contains 4,705,237 bp with a G+C content of 54.65% and contains 4,343 protein-coding genes and 46 tRNA genes. ..
  61. Baik K, Hwang Y, Choi J, Kwon J, Seong C. Dongia rigui sp. nov., isolated from freshwater of a large wetland in Korea. Antonie Van Leeuwenhoek. 2013;104:1143-50 pubmed publisher
    ..On the basis of the data presented in this study, strain 04SU4-P(T) represents a novel species, for which the name Dongia rigui is proposed. The type strain is 04SU4-P(T) (KCTC 23341(T) = JCM 17521(T)). ..
  62. Chemla Y, Grossman H, Lee T, Clarke J, Adamkiewicz M, Buchanan B. A new study of bacterial motion: superconducting quantum interference device microscopy of magnetotactic bacteria. Biophys J. 1999;76:3323-30 pubmed
    ..In addition, the microscope can easily resolve the motion of a single bacterium. This technique can be extended to any cell to which a magnetic tag can be attached. ..
  63. Heyen U, Schuler D. Growth and magnetosome formation by microaerophilic Magnetospirillum strains in an oxygen-controlled fermentor. Appl Microbiol Biotechnol. 2003;61:536-44 pubmed
    ..In conclusion, the presented results provide the basis for large-scale cultivation of magnetospirilla under defined conditions. ..
  64. Lanham A, Reis M, Lemos P. Kinetic and metabolic aspects of Defluviicoccus vanus-related organisms as competitors in EBPR systems. Water Sci Technol. 2008;58:1693-7 pubmed publisher
    ..Volatile Fatty Acid (VFA) uptake in aerobic phase and consequential PHA production indicate these organisms as possible candidates for PHA production. ..
  65. Ghirardi M, Dubini A, Yu J, Maness P. Photobiological hydrogen-producing systems. Chem Soc Rev. 2009;38:52-61 pubmed publisher
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    ..The genus Inquilinus belongs to the family Rhodospirillaceae in the order Rhodospirillales, class Alphaproteobacteria...
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    ..The name Elstera litoralis gen. nov., sp. nov. is suggested, with strain Dia-1(T) (?=?DSM 19532(T)?=?LMG 24234(T)) as the type strain of the type species...
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    ..6-kilobase PstI fragment was used as the template, although a 537-base-pair XmaIII fragment was sufficient to direct the synthesis of pucB and pucA fusion product...
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    ..This work has also allowed identification of new and specific proteins for the Rhodospirillaceae family.
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    ..Phylogenetic analyses showed that strain 2622(T) formed a distinct lineage in the family Rhodospirillaceae and shared 91.7 and 90...
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    ..262-8(T) was a phylogenetically novel bacterium that should be classified in a new genus of the family Rhodospirillaceae, for which the name Constrictibacter antarcticus gen. nov., sp. nov. is proposed...
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    ..4% in transconjugants. Further analysis of DNA sequences flanking transposon by inverted polymerase chain reaction allowed isolation of at least 10 genes or DNA sequences involved in BMP synthesis in M. magneticum AMB-1...
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    ..These results may suggest that revising these and other species interactions in CF might enable the development of more suitable and effective therapies in the future...
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    ..showed that strain LTC-2(T) forms a distinct lineage with respect to closely related genera in the family Rhodospirillaceae, most closely related to the genera Elstera and Dongia, and the levels of 16S rRNA gene sequence similarity ..
  90. Cai H, Zeng Y, Wang Y, Jiang H. Elstera cyanobacteriorum sp. nov., a novel bacterium isolated from cyanobacterial aggregates in a eutrophic lake. Int J Syst Evol Microbiol. 2017;67:4272-4275 pubmed publisher
    ..nov. is proposed. The type strain is TH019T (=CGMCC 1.15802T=LMG 29721T)...
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    ..The equilibration factor between these dichotomous states mainly determines the temperature dependence of the peak shift...