ochrobactrum

Summary

Summary: A genus of the family BRUCELLACEAE comprising obligately aerobic gram-negative rods with parallel sides and rounded ends.

Top Publications

  1. Mei G, Yan X, Turak A, Luo Z, Zhang L. AidH, an alpha/beta-hydrolase fold family member from an Ochrobactrum sp. strain, is a novel N-acylhomoserine lactonase. Appl Environ Microbiol. 2010;76:4933-42 pubmed publisher
    ..In this study, we report the characterization of a novel AHL-degrading protein from the soil bacterium Ochrobactrum sp. strain T63...
  2. Pandey S, Ghosh P, Ghosh S, De T, Maiti T. Role of heavy metal resistant Ochrobactrum sp. and Bacillus spp. strains in bioremediation of a rice cultivar and their PGPR like activities. J Microbiol. 2013;51:11-7 pubmed publisher
    ..The three bacterial strains included a cadmium resistant Ochrobactrum sp., a lead resistant Bacillus sp. and an arsenic resistant Bacillus sp...
  3. Branco R, Chung A, Morais P. Sequencing and expression of two arsenic resistance operons with different functions in the highly arsenic-resistant strain Ochrobactrum tritici SCII24T. BMC Microbiol. 2008;8:95 pubmed publisher
    ..Organisms surviving in arsenic contaminated environments can have a diversity of mechanisms to resist to the harmful effects of arsenical compounds...
  4. Morais P, Branco R, Francisco R. Chromium resistance strategies and toxicity: what makes Ochrobactrum tritici 5bvl1 a strain highly resistant. Biometals. 2011;24:401-10 pubmed publisher
    ..Several Cr(VI) resistant species, belonging to a variety of genera, have been isolated in recent years. Ochrobactrum tritici strain 5bvl1 is a model for a highly Cr(VI)-resistant and reducing microorganism, with different ..
  5. Qiu X, Bai W, Zhong Q, Li M, He F, Li B. Isolation and characterization of a bacterial strain of the genus Ochrobactrum with methyl parathion mineralizing activity. J Appl Microbiol. 2006;101:986-94 pubmed
    ..To isolate and characterize a methyl parathion (MP)-mineralizing bacterium, and to elucidate the degradative pathway of MP and localize the responsible degrading genes...
  6. Wu Y, He T, Zhong M, Zhang Y, Li E, Huang T, et al. Isolation of marine benzo[a]pyrene-degrading Ochrobactrum sp. BAP5 and proteins characterization. J Environ Sci (China). 2009;21:1446-51 pubmed
    ..of benzo[a]pyrene (BaP) was isolated from marine sediments of Xiamen Western Sea, China and identified as Ochrobactrum sp. according to 16S rRNA gene sequence as well as Biolog microbial identification system...
  7. Scholz H, Al Dahouk S, Tomaso H, Neubauer H, Witte A, Schloter M, et al. Genetic diversity and phylogenetic relationships of bacteria belonging to the Ochrobactrum-Brucella group by recA and 16S rRNA gene-based comparative sequence analysis. Syst Appl Microbiol. 2008;31:1-16 pubmed publisher
    The genetic diversity and phylogenetic interrelationships among 106 Ochrobactrum strains (O. anthropi: 72, O. intermedium: 22, O. tritici: 5, O. oryzae: 2, O. grignonense: 2, O. gallinifaecis: 1, O...
  8. Waranusantigul P, Lee H, Kruatrachue M, Pokethitiyook P, Auesukaree C. Isolation and characterization of lead-tolerant Ochrobactrum intermedium and its role in enhancing lead accumulation by Eucalyptus camaldulensis. Chemosphere. 2011;85:584-90 pubmed publisher
    ..of partial 16S rRNA gene sequence, the three isolates were identified as Microbacterium paraoxydans BN-2, Ochrobactrum intermedium BN-3, and Bacillus fusiformis BN-4. Among these strains, O...
  9. Veeranagouda Y, Emmanuel Paul P, Gorla P, Siddavattam D, Karegoudar T. Complete mineralisation of dimethylformamide by Ochrobactrum sp. DGVK1 isolated from the soil samples collected from the coalmine leftovers. Appl Microbiol Biotechnol. 2006;71:369-75 pubmed
    ..Specifically, the 16S rDNA sequence of strain DGVK1 has shown 97% similarity to Ochrobactrum anthropi LMG 3331 (D12794)...

More Information

Publications99

  1. Tian J, Wang P, Gao S, Chu X, Wu N, Fan Y. Enhanced thermostability of methyl parathion hydrolase from Ochrobactrum sp. M231 by rational engineering of a glycine to proline mutation. FEBS J. 2010;277:4901-8 pubmed publisher
    ..The structure of methyl parathion hydrolase (MPH) from Ochrobactrum sp...
  2. Scholz H, Tomaso H, Al Dahouk S, Witte A, Schloter M, Kampfer P, et al. Genotyping of Ochrobactrum anthropi by recA-based comparative sequence, PCR-RFLP, and 16S rRNA gene analysis. FEMS Microbiol Lett. 2006;257:7-16 pubmed
    A recA-PCR restriction fragment length polymorphism assay was developed to study intraspecies variation among Ochrobactrum anthropi...
  3. Arulazhagan P, Vasudevan N. Biodegradation of polycyclic aromatic hydrocarbons by a halotolerant bacterial strain Ochrobactrum sp. VA1. Mar Pollut Bull. 2011;62:388-94 pubmed publisher
    ..The promising PAH-degrading halotolerant bacterial strain, VA1, was identified as Ochrobactrum sp. using biochemical and molecular techniques.
  4. Yuan Y, Lu Z, Huang L, Li Y, Lu F, Bie X, et al. Biodegradation of nicotine from tobacco waste extract by Ochrobactrum intermedium DN2. J Ind Microbiol Biotechnol. 2007;34:567-70 pubmed
    b>Ochrobactrum intermedium DN2 was used to degrade nicotine in tobacco waste extracts. The optimal temperature and pH of nicotine degradation by strain DN2 was 30-37 degrees C and 7.0, respectively...
  5. Imran A, Hafeez F, Fruhling A, Schumann P, Malik K, Stackebrandt E. Ochrobactrum ciceri sp. nov., isolated from nodules of Cicer arietinum. Int J Syst Evol Microbiol. 2010;60:1548-53 pubmed publisher
    ..The almost full-length 16S rRNA gene sequence showed highest similarities to those of strains of the genus Ochrobactrum. Based on results of MALDI-TOF MS and 16S rRNA gene sequence similarity (98...
  6. Yuan Y, Lu Z, Huang L, Bie X, Lu F, Li Y. Optimization of a medium for enhancing nicotine biodegradation by Ochrobactrum intermedium DN2. J Appl Microbiol. 2006;101:691-7 pubmed
    To optimize a medium for nicotine degradation by Ochrobactrum intermedium DN2 in presence of yeast extract, glucose and Tween 80 using response surface methodology (RSM).
  7. Tian J, Wang P, Huang L, Chu X, Wu N, Fan Y. Improving the thermostability of methyl parathion hydrolase from Ochrobactrum sp. M231 using a computationally aided method. Appl Microbiol Biotechnol. 2013;97:2997-3006 pubmed publisher
    ..unfolding free energy difference between the mutant and wild-type (WT) methyl parathion hydrolase enzyme from Ochrobactrum sp. M231 [Ochr-methyl parathion hydrolase (MPH)]...
  8. Bathe S, Achouak W, Hartmann A, Heulin T, Schloter M, Lebuhn M. Genetic and phenotypic microdiversity of Ochrobactrum spp. FEMS Microbiol Ecol. 2006;56:272-80 pubmed
    The diversity of Ochrobactrum anthropi, Ochrobactrum intermedium, Ochrobactrum tritici and Ochrobactrum grignonense in agricultural soil and on the wheat rhizoplane was investigated. O...
  9. Lebuhn M, Bathe S, Achouak W, Hartmann A, Heulin T, Schloter M. Comparative sequence analysis of the internal transcribed spacer 1 of Ochrobactrum species. Syst Appl Microbiol. 2006;29:265-75 pubmed
    The internal 16S/23S rDNA (rrs/rrl) internal spacer region 1 (ITS1) of 54 Ochrobactrum strains and close relatives was analysed...
  10. Woo S, Ten L, Park J, Lee M. Ochrobactrum daejeonense sp. nov., a nitrate-reducing bacterium isolated from sludge of a leachate treatment plant. Int J Syst Evol Microbiol. 2011;61:2690-6 pubmed publisher
    ..strain MJ11(T) belonged to the family Brucellaceae, class Alphaproteobacteria, and was most closely related to Ochrobactrum ciceri Ca-34(T) (97.9 % sequence similarity) and Ochrobactrum pituitosum CCUG 50899(T) (96.4 %)...
  11. Teyssier C, Marchandin H, Masnou A, Jeannot J, de Buochberg M, Jumas Bilak E. Pulsed-field gel electrophoresis to study the diversity of whole-genome organization in the genus Ochrobactrum. Electrophoresis. 2005;26:2898-907 pubmed
    The alpha-proteobacterial genus Ochrobactrum groups together organisms that display varied life-styles, such as free-living bacteria, members of rhizosphere and soil, nitrogen-fixing bacteria in plant nodules, xenobiotic-degrading ..
  12. Branco R, Chung A, Johnston T, Gurel V, Morais P, Zhitkovich A. The chromate-inducible chrBACF operon from the transposable element TnOtChr confers resistance to chromium(VI) and superoxide. J Bacteriol. 2008;190:6996-7003 pubmed publisher
    ..identification of the transposon-located (TnOtChr) chromate resistance genes from the highly tolerant strain Ochrobactrum tritici 5bvl1 surviving chromate concentrations of >50 mM...
  13. Branco R, Alpoim M, Morais P. Ochrobactrum tritici strain 5bvl1 - characterization of a Cr(VI)-resistant and Cr(VI)-reducing strain. Can J Microbiol. 2004;50:697-703 pubmed
    Bacterial strain 5bvl1, isolated from a chromium-contaminated wastewater treatment plant and identified as Ochrobactrum tritici, was resistant to a broad range of antibiotics, to Cr(VI), Ni(II), Co(II), Cd(II), and Zn(II), and was able to ..
  14. Zhao L, Teng S, Liu Y. Characterization of a versatile rhizospheric organism from cucumber identified as Ochrobactrum haematophilum. J Basic Microbiol. 2012;52:232-44 pubmed publisher
    ..designated H10, was isolated from the rhizosphere at Laixi in Shandong Province, China, and was identified as Ochrobactrum haematophilum based on API 20 NE tests and 16S rRNA gene sequence analysis...
  15. Verma S, Singh A, Chowdhury S, Tripathi A. Endophytic colonization ability of two deep-water rice endophytes, Pantoea sp. and Ochrobactrum sp. using green fluorescent protein reporter. Biotechnol Lett. 2004;26:425-9 pubmed
    ..Pantoea sp. and Ochrobactrum sp...
  16. Wu X, Wang Y, Liang R, Dai Q, Chao W. Degradation of di-n-butyl phthalate by newly isolated Ochrobactrum sp. Bull Environ Contam Toxicol. 2010;85:235-7 pubmed publisher
    ..The isolate was identified as Ochrobactrum sp. based on its 16S rRNA gene sequence...
  17. Liang B, Li R, Jiang D, Sun J, Qiu J, Zhao Y, et al. Hydrolytic dechlorination of chlorothalonil by Ochrobactrum sp. CTN-11 isolated from a chlorothalonil-contaminated soil. Curr Microbiol. 2010;61:226-33 pubmed publisher
    ..biochemical characteristics and comparative analysis of the 16S rRNA genes, strain CTN-11 was identified as Ochrobactrum sp...
  18. Pandey S, Saha P, Barai P, Maiti T. Characterization of a Cd(2+)-resistant strain of Ochrobactrum sp. isolated from slag disposal site of an iron and steel factory. Curr Microbiol. 2010;61:106-11 pubmed publisher
    ..The isolate was identified as Ochrobactrum sp. on the basis of 16S rDNA sequence-based molecular phylogenetic approach and phenotypic characteristics...
  19. Chen S, Hu M, Liu J, Zhong G, Yang L, Rizwan ul Haq M, et al. Biodegradation of beta-cypermethrin and 3-phenoxybenzoic acid by a novel Ochrobactrum lupini DG-S-01. J Hazard Mater. 2011;187:433-40 pubmed publisher
    ..the morphology, physio-biochemical characteristics, and 16S rDNA sequence analysis, DG-S-01 was identified as Ochrobactrum lupini. DG-S-01 effectively degraded beta-CP with total inocula biomass A(590 nm) = 0.1-0...
  20. Huber B, Scholz H, Kampfer P, Falsen E, Langer S, Busse H. Ochrobactrum pituitosum sp. nov., isolated from an industrial environment. Int J Syst Evol Microbiol. 2010;60:321-6 pubmed publisher
    ..motile bacterium isolated from industrial environment in Sweden and tentatively assigned to the species Ochrobactrum anthropi, was studied in order to clarify its taxonomic status...
  21. Kampfer P, Sessitsch A, Schloter M, Huber B, Busse H, Scholz H. Ochrobactrum rhizosphaerae sp. nov. and Ochrobactrum thiophenivorans sp. nov., isolated from the environment. Int J Syst Evol Microbiol. 2008;58:1426-31 pubmed publisher
    ..rRNA) gene sequencing, these strains were shown to belong to the Alphaproteobacteria, most closely related to Ochrobactrum pseudogrignonense (98.4 and 99.3 % similarity to the type strain, respectively)...
  22. Lin C, Cheng Y, Tsai S. Influences of metals on kinetics of methyl tert-butyl ether biodegradation by Ochrobactrum cytisi. Chemosphere. 2007;69:1485-91 pubmed
    ..and nickel on the degradation of MTBE (methyl tert-butyl ether), by an aerobic MTBE-degrading strain, Ochrobactrum cytisi, were investigated. The result showed that unlike previous findings, O...
  23. Teyssier C, Marchandin H, Jean Pierre H, Masnou A, Dusart G, Jumas Bilak E. Ochrobactrum pseudintermedium sp. nov., a novel member of the family Brucellaceae, isolated from human clinical samples. Int J Syst Evol Microbiol. 2007;57:1007-13 pubmed
    ..They shared more than 99.8 % of the 16S rRNA gene nucleotide positions. The strains were related to Ochrobactrum intermedium with about 97.48 % 16S rRNA gene sequence similarity...
  24. Martin J, Ito Y, Homann V, Haygood M, Butler A. Structure and membrane affinity of new amphiphilic siderophores produced by Ochrobactrum sp. SP18. J Biol Inorg Chem. 2006;11:633-41 pubmed
    The coastal alpha-proteobacterium Ochrobactrum sp. SP18 produces a suite of three citrate-derived, cell-associated amphiphilic siderophores, ochrobactins A-C...
  25. Sultan S, Hasnain S. Reduction of toxic hexavalent chromium by Ochrobactrum intermedium strain SDCr-5 stimulated by heavy metals. Bioresour Technol. 2007;98:340-4 pubmed
    A Cr(VI) resistant bacterial strain SDCr-5, identified as Ochrobactrum intermedium on the basis of 16S rRNA gene sequencing, was tolerant to high concentrations of Cr(VI) up to 15 mg ml(-1) in acetate minimal medium. O...
  26. Jafra S, Przysowa J, Czajkowski R, Michta A, Garbeva P, van der Wolf J. Detection and characterization of bacteria from the potato rhizosphere degrading N-acyl-homoserine lactone. Can J Microbiol. 2006;52:1006-15 pubmed
    ..to 16S rDNA sequence analysis and fatty acid methyl ester profiling, the isolates belonged to the genera Ochrobactrum, Rhodococcus, Pseudomonas, Bacillus, and Delftia...
  27. Zurdo Piñeiro J, Rivas R, Trujillo M, Vizcaino N, Carrasco J, Chamber M, et al. Ochrobactrum cytisi sp. nov., isolated from nodules of Cytisus scoparius in Spain. Int J Syst Evol Microbiol. 2007;57:784-8 pubmed
    ..Phylogenetic analysis of the 16S rRNA gene showed that these strains belong to the genus Ochrobactrum, their closest relatives being Ochrobactrum anthropi and Ochrobactrum lupini, with 100 and 99...
  28. Trujillo M, Willems A, Abril A, Planchuelo A, Rivas R, Ludeña D, et al. Nodulation of Lupinus albus by strains of Ochrobactrum lupini sp. nov. Appl Environ Microbiol. 2005;71:1318-27 pubmed
    ..phylogenetic analysis based on the 16S and 23S rRNA gene sequences showed that the isolates belong to the genus Ochrobactrum. The strains were able to reinfect Lupinus plants...
  29. Faisal M, Hasnain S. Growth stimulatory effect of Ochrobactrum intermedium and Bacillus cereus on Vigna radiata plants. Lett Appl Microbiol. 2006;43:461-6 pubmed
    This study assessed the plant growth-promoting ability of the bacterial strains Ochrobactrum intermedium (isolate CrT-1) and Bacillus cereus (isolate S-6).
  30. Teyssier C, Marchandin H, Jean Pierre H, Diego I, Darbas H, Jeannot J, et al. Molecular and phenotypic features for identification of the opportunistic pathogens Ochrobactrum spp. J Med Microbiol. 2005;54:945-53 pubmed
    Among the six species characterized within the genus Ochrobactrum, Ochrobactrum anthropi and Ochrobactrum intermedium are currently reported as opportunistic pathogens in humans...
  31. Barquero Calvo E, Conde Alvarez R, Chacón Díaz C, Quesada Lobo L, Martirosyan A, Guzmán Verri C, et al. The differential interaction of Brucella and ochrobactrum with innate immunity reveals traits related to the evolution of stealthy pathogens. PLoS ONE. 2009;4:e5893 pubmed publisher
    ..Brucella members follow this strategy and are highly virulent, but other Brucellaceae like Ochrobactrum are rhizosphere inhabitants and only opportunistic pathogens...
  32. Thoma B, Straube E, Scholz H, Al Dahouk S, Zöller L, Pfeffer M, et al. Identification and antimicrobial susceptibilities of Ochrobactrum spp. Int J Med Microbiol. 2009;299:209-20 pubmed publisher
    b>Ochrobactrum (O.) anthropi is an opportunistic emerging pathogen closely related to the genus Brucella. Identification and differentiation from brucellae and other Ochrobactrum spp...
  33. He Z, Gao F, Sha T, Hu Y, He C. Isolation and characterization of a Cr(VI)-reduction Ochrobactrum sp. strain CSCr-3 from chromium landfill. J Hazard Mater. 2009;163:869-73 pubmed publisher
    ..high Cr(VI)-reducing ability under alkaline conditions was isolated from a chromium landfill and identified as Ochrobactrum sp. on the basis of 16S rRNA gene sequence analysis. The cells were rod shaped, Gram-negative and motile...
  34. Dharne M, Misra S, Misra V, Dwivedi M, Patole M, Shouche Y. Isolation of urease-positive Ochrobactrum intermedium in the stomach of a non-ulcer dyspeptic patient from north India. J Microbiol Immunol Infect. 2008;41:183-6 pubmed
    b>Ochrobactrum intermedium is an opportunistic human pathogen found in immunocompromised individuals. We report the case of a north Indian patient with non-ulcer dyspepsia whose gastric biopsy revealed the presence of O...
  35. Yamada T, Takahama Y, Yamada Y. Biodegradation of 2,4,6-tribromophenol by Ochrobactrum sp. strain TB01. Biosci Biotechnol Biochem. 2008;72:1264-71 pubmed
    ..This bacterium, designated strain TB01, was identified as an Ochrobactrum species. The organism degraded 100 microM of 2,4,6-TBP within 36 h in a growing culture...
  36. Ngom A, Nakagawa Y, Sawada H, Tsukahara J, Wakabayashi S, Uchiumi T, et al. A novel symbiotic nitrogen-fixing member of the Ochrobactrum clade isolated from root nodules of Acacia mangium. J Gen Appl Microbiol. 2004;50:17-27 pubmed
    ..The nucleotide sequences of strain DASA 35030 indicated high homology (>99%) with members of the genus Ochrobactrum in Brucellaceae, although the sequences of other isolates were homologous to those of two distinct genera ..
  37. Krzyzanowska D, Obuchowski M, Bikowski M, Rychlowski M, Jafra S. Colonization of potato rhizosphere by GFP-tagged Bacillus subtilis MB73/2, Pseudomonas sp. P482 and Ochrobactrum sp. A44 shown on large sections of roots using enrichment sample preparation and confocal laser scanning microscopy. Sensors (Basel). 2012;12:17608-19 pubmed publisher
    ..P482 and Ochrobactrum sp. A44. The presence of these strains in the rhizosphere of soil-grown potato (Solanum tuberosum L...
  38. Kiliç N, Dönmez G. Environmental conditions affecting exopolysaccharide production by Pseudomonas aeruginosa, Micrococcus sp., and Ochrobactrum sp. J Hazard Mater. 2008;154:1019-24 pubmed
    Three different chromium-resistant microorganisms (Pseudomonas aeruginosa, Micrococcus sp., and Ochrobactrum sp...
  39. De B, Stauffer L, Koylass M, Sharp S, Gee J, Helsel L, et al. Novel Brucella strain (BO1) associated with a prosthetic breast implant infection. J Clin Microbiol. 2008;46:43-9 pubmed
    ..However, comparison with equivalent sequences in Ochrobactrum spp. confirms that the isolate is much more closely related to Brucella than to Ochrobactrum spp...
  40. Di Gioia D, Michelles A, Pierini M, Bogialli S, Fava F, Barberio C. Selection and characterization of aerobic bacteria capable of degrading commercial mixtures of low-ethoxylated nonylphenols. J Appl Microbiol. 2008;104:231-42 pubmed
    ..Isolation and characterization of new bacterial strains capable of degrading nonylphenol ethoxylates (NPnEO) with a low ethoxylation degree, which are particularly recalcitrant to biodegradation...
  41. Xia F, Zhang H, Wei X, Su Y, He R. Characterization of H2S removal and microbial community in landfill cover soils. Environ Sci Pollut Res Int. 2015;22:18906-17 pubmed publisher
    ..Pyrosequencing of 16S ribosomal RNA (rRNA) gene showed that the known sulfur-metabolizing bacteria Ochrobactrum, Paracoccus, Comamonas, Pseudomonas, and Acinetobacter dominated in the WBS and LCS...
  42. Lafi F, Alam I, Geurts R, Bisseling T, Bajic V, Hirt H, et al. Draft Genome Sequence of Ochrobactrum intermedium Strain SA148, a Plant Growth-Promoting Desert Rhizobacterium. Genome Announc. 2017;5: pubmed publisher
    i>Ochrobactrum intermedium strain SA148 is a plant growth-promoting bacterium isolated from sandy soil in the Jizan area of Saudi Arabia. Here, we report the 4...
  43. Jing W, Sui G, Liu S. Characteristics of a microcystin-LR biodegrading bacterial isolate: Ochrobactrum sp. FDT5. Bull Environ Contam Toxicol. 2014;92:119-22 pubmed publisher
    ..How to remove MCs from water bodies is an environmental problem. In this study, an algicidal bacterium Ochrobactrum sp...
  44. Ren X, Li H, Chen S. Cloning of the chlorothalonil-degrading gene cluster and evidence of its horizontal transfer. Curr Microbiol. 2011;62:1068-73 pubmed publisher
    Strain Ochrobactrum lupine TP-D1 was found to degrade chlorothalonil (TPN) to 4-hydroxy-chlorothalonil (TPN-OH)...
  45. Aryal S, Carter House D, Stajich J, Dillman A. Microbial associates of the southern mole cricket (Scapteriscus borellii) are highly pathogenic. J Invertebr Pathol. 2017;150:54-62 pubmed publisher
    ..marcescens (white), S. marcescens (purple), Achromobacter xylosoxidans, Chryseobacterium sp., Ochrobactrum anthropi, Tsukamurella tryosinosolvens, and Beauveria bassiana...
  46. Branco R, Cristóvão A, Morais P. Highly sensitive, highly specific whole-cell bioreporters for the detection of chromate in environmental samples. PLoS ONE. 2013;8:e54005 pubmed publisher
    ..expression of gfp under the control of the chr promoter and the chrB regulator gene of TnOtChr determinant from Ochrobactrum tritici 5bvl1...
  47. Lv P, Luo J, Zhuang X, Zhang D, Huang Z, Bai Z. Diversity of culturable aerobic denitrifying bacteria in the sediment, water and biofilms in Liangshui River of Beijing, China. Sci Rep. 2017;7:10032 pubmed publisher
    ..mendocina and Pseudomonas putida, composed the major culturable aerobic denitrifiers of the river, followed by Ochrobactrum sp. and Rheinheimera sp. The PCA plot showed the unclassified Pseudomonas sp...
  48. Scholz H, Pfeffer M, Witte A, Neubauer H, Al Dahouk S, Wernery U, et al. Specific detection and differentiation of Ochrobactrum anthropi, Ochrobactrum intermedium and Brucella spp. by a multi-primer PCR that targets the recA gene. J Med Microbiol. 2008;57:64-71 pubmed
    b>Ochrobactrum anthropi, Ochrobactrum intermedium and Brucella spp. are phenotypically and genetically closely related pathogens that may cause disease with similar clinical presentation...
  49. Kiliç N, Nielsen J, Yüce M, Dönmez G. Characterization of a simple bacterial consortium for effective treatment of wastewaters with reactive dyes and Cr(VI). Chemosphere. 2007;67:826-31 pubmed
    ..7 mg g(-1) at 117.1 mg l(-1) Cr(VI) and 50.8 mg l(-1) dye concentration. This ability to bioaccumulate dye and Cr(VI) was more efficient than the enriched sludge from which they were isolated. ..
  50. Hubalek Z, Scholz H, Sedláček I, Melzer F, Sanogo Y, Nesvadbova J. Brucellosis of the common vole (Microtus arvalis). Vector Borne Zoonotic Dis. 2007;7:679-87 pubmed
    ..From the clinical samples, small Gram-negative coccobacilli were isolated and identified as Ochrobactrum intermedium by API 20NE and colistin sensitivity profiles...
  51. Hahm M, Sumayo M, Hwang Y, Jeon S, Park S, Lee J, et al. Biological control and plant growth promoting capacity of rhizobacteria on pepper under greenhouse and field conditions. J Microbiol. 2012;50:380-5 pubmed publisher
    Plant growth promoting rhizobacteria Ochrobactrum lupini KUDC1013 and Novosphingobium pentaromativorans KUDC1065 isolated from Dokdo Island, S...
  52. Pan X, Xu T, Xu H, Fang H, Yu Y. Characterization and genome functional analysis of the DDT-degrading bacterium Ochrobactrum sp. DDT-2. Sci Total Environ. 2017;592:593-599 pubmed publisher
    A strain of Ochrobactrum sp. DDT-2 that was capable of degrading DDT as the sole carbon and energy source was isolated and sequenced, and its biodegradation characteristics and metabolism mechanism were examined...
  53. Lee W, Park D. Electrochemical activation of nitrate reduction to nitrogen by Ochrobactrum sp. G3-1 using a noncompartmented electrochemical bioreactor. J Microbiol Biotechnol. 2009;19:836-44 pubmed
    A denitrification bacterium was isolated from riverbed soil and identified as Ochrobactrum sp., whose specific enzymes for denitrification metabolism were biochemically assayed or confirmed with specific coding genes...
  54. Weber N, Gorwa Grauslund M, Carlquist M. Improvement of whole-cell transamination with Saccharomyces cerevisiae using metabolic engineering and cell pre-adaptation. Microb Cell Fact. 2017;16:3 pubmed publisher
    ..of three different ?-transaminases originating from Capsicum chinense, Chromobacterium violaceum, and Ochrobactrum anthropi was compared for whole-cell catalyzed kinetic resolution of racemic 1-phenylethylamine to (R)-1-..
  55. Oyehan T, Al Thukair A. Isolation and characterization of PAH-degrading bacteria from the Eastern Province, Saudi Arabia. Mar Pollut Bull. 2017;115:39-46 pubmed publisher
    ..citronellolis, Ochrobactrum intermedium and Cupriavidus taiwanensis...
  56. Gao A, Mei G, Liu S, Wang P, Tang Q, Liu Y, et al. High-resolution structures of AidH complexes provide insights into a novel catalytic mechanism for N-acyl homoserine lactonase. Acta Crystallogr D Biol Crystallogr. 2013;69:82-91 pubmed publisher
    ..Here, structures of the AHL-lactonase from Ochrobactrum sp...
  57. Príncipe A, Jofré E, Alvarez F, Mori G. Role of a serine-type D-alanyl-D-alanine carboxypeptidase on the survival of Ochrobactrum sp. 11a under ionic and hyperosmotic stress. FEMS Microbiol Lett. 2009;295:261-73 pubmed publisher
    The plant growth-promoting rhizobacterium, Ochrobactrum sp. 11a displays a high intrinsic salinity tolerance and has been used in this work to study the molecular basis of bacterial responses to high concentrations of NaCl...
  58. Chang B, Chiang B, Yuan S. Biodegradation of nonylphenol in soil. Chemosphere. 2007;66:1857-62 pubmed
    ..We also found that the addition of various substrates changed the microbial community in the soils. Cytophaga sp. and Ochrobactrum sp. were constantly dominant bacteria under various conditions in the soil.
  59. Sayavedra Soto L, Chang W, Lin T, Ho C, Liu H. Alkane utilization by Rhodococcus strain NTU-1 alone and in its natural association with Bacillus fusiformis L-1 and Ochrobactrum sp. Biotechnol Prog. 2006;22:1368-73 pubmed
    ..The culture was composed of Rhodococcus strain NTU-1, Bacillus fusiformis L-1, and Ochrobactrum sp. Rhodococcus strain NTU-1 carried out the degradation of the alkane via a hydroxylase...
  60. Kim Y, Park K, Joo G, Jeong E, Kim J, Rhee I. Glutathione-dependent biotransformation of the fungicide chlorothalonil. J Agric Food Chem. 2004;52:4192-6 pubmed
    A gene responsible for the chlorothalonil biotransformation was cloned from the chromosomal DNA of Ochrobactrum anthropi SH35B, capable of efficiently dissipating the chlorothalonil. The gene encoding glutathione S-transferase (GST) of O...
  61. Zhou J, Sun Q, Chen D, Wang H, Yang K. Ochrobactrum anthropi used to control ammonium for nitrate removal by starch-stabilized nanoscale zero valent iron. Water Sci Technol. 2017;76:1827-1832 pubmed publisher
    In this study, the hydrogenotrophic denitrifying bacterium Ochrobactrum anthropi was added in to the process of nitrate removal by starch-stabilized nanoscale zero valent iron (nZVI) to minimize undesirable ammonium...
  62. Ahmad A, Broce A, Zurek L. Evaluation of significance of bacteria in larval development of Cochliomyia macellaria (Diptera: Calliphoridae). J Med Entomol. 2006;43:1129-33 pubmed
    ..Escherichia coli O157:H7 (Escherich), Enterococcus faecalis (Orla-Jensen), and Ochrobactrum sp. (Holmes). Developmental assays demonstrated that C...
  63. Tripathi A, Verma S, Chowdhury S, Lebuhn M, Gattinger A, Schloter M. Ochrobactrum oryzae sp. nov., an endophytic bacterial species isolated from deep-water rice in India. Int J Syst Evol Microbiol. 2006;56:1677-80 pubmed
    ..The highest level of 16S rRNA sequence similarity (96.8 %) to strain MTCC 4195(T) was shown by Ochrobactrum gallinifaecis DSM 15295(T)...
  64. Liu T, Wei L, Qiao M, Zou D, Yang X, Lin A. Mineralization of pyrene induced by interaction between Ochrobactrum sp. PW and ryegrass in spiked soil. Ecotoxicol Environ Saf. 2016;133:290-6 pubmed publisher
    This study was conducted to investigate the capability of pyrene-degrading bacterium Ochrobactrum sp. PW and ryegrass (Lolium multiflorum) grown alone and in combination on the degradation of pyrene in soil...
  65. Faisal M, Hasnain S. Comparative study of Cr(VI) uptake and reduction in industrial effluent by Ochrobactrum intermedium and Brevibacterium sp. Biotechnol Lett. 2004;26:1623-8 pubmed
    ..agar, 25 mg ml(-1) in nutrient broth, and up to 10 mg ml(-1) in acetate-minimal media, were identified as Ochrobactrum intermedium and Brevibacterium sp., respectively, on the basis of 16S rRNA gene sequencing...
  66. Firdous S, Iqbal S, Anwar S, Jabeen H. Identification and analysis of 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene from glyphosate-resistant Ochrobactrum intermedium Sq20. Pest Manag Sci. 2018;74:1184-1196 pubmed publisher
    ..Using an enrichment culture technique, a glyphosate-resistant bacterium, Ochrobactrum intermedium Sq20 was isolated from glyphosate-contaminated indigenous soil and characterized...
  67. Furlan J, Stehling E. High-level of resistance to ?-lactam and presence of ?-lactamases encoding genes in Ochrobactrum sp. and Achromobacter sp. isolated from soil. J Glob Antimicrob Resist. 2017;11:133-137 pubmed publisher
    Bacteria belonging to the genera Ochrobactrum and Achromobacter are bacteria considered opportunistic, causing infections mainly in immunocompromised patients. ?-lactamases are the main cause of resistance to ?-lactam antibiotics...
  68. Tabernacka A, Zborowska E, Pogoda K, Żołądek M. Removal of tetrachloroethene from polluted air by activated sludge. Environ Technol. 2017;:1-10 pubmed publisher
    ..Most of them were Gram-negative rods - Pseudomonas aeruginosa, Pseudomonas putida, Ralstonia pickettii and Ochrobactrum anthropii. Only one strain was Gram-positive and of cylindrical shape...
  69. Pandey S, Barai P, Maiti T. Influence of heavy metals on the activity of antioxidant enzymes in the metal resistant strains of Ochrobactrum and Bacillus sp. J Environ Biol. 2013;34:1033-7 pubmed
    Three bacterial strains, a cadmium resistant Ochrobactrum sp. designated as CdSP9 and two strains of Bacillus sp...
  70. Hadi F, Mousavi A, Noghabi K, Tabar H, Salmanian A. New bacterial strain of the genus Ochrobactrum with glyphosate-degrading activity. J Environ Sci Health B. 2013;48:208-13 pubmed publisher
    ..glyphosate-degrading activity was identified by biochemical features and 16S rRNA sequence analysis as Ochrobactrum sp. (GDOS). Herbicide (3 mM) degradation was induced by phosphate starvation, and was completed within 60 h...
  71. Han H, Ling Z, Zhou T, Xu R, He Y, Liu P, et al. Copper (II) binding of NAD(P)H- flavin oxidoreductase (NfoR) enhances its Cr (VI)-reducing ability. Sci Rep. 2017;7:15481 pubmed publisher
    ..Copper stimulates microbial reduction of Cr (VI) by the Bacillus, Ochrobactrum, and Gluconobacter species; however, the mechanism remains unclear...
  72. Wu C. [Isolation and characterization of a sodium dodecyl benzene sulfonate degrading bacterial strain]. Wei Sheng Wu Xue Bao. 2006;46:988-93 pubmed
    ..The strain was identified as Ochrobactrum anthropi based on its morphological and physiological properties, and 16S rDNA sequence analysis...
  73. Ghosal D, Chakraborty J, Khara P, Dutta T. Degradation of phenanthrene via meta-cleavage of 2-hydroxy-1-naphthoic acid by Ochrobactrum sp. strain PWTJD. FEMS Microbiol Lett. 2010;313:103-10 pubmed publisher
    The present study describes the assimilation of phenanthrene by an aerobic bacterium, Ochrobactrum sp. strain PWTJD, isolated from municipal waste-contaminated soil sample utilizing phenanthrene as a sole source of carbon and energy...
  74. Katsivela E, Moore E, Maroukli D, Strompl C, Pieper D, Kalogerakis N. Bacterial community dynamics during in-situ bioremediation of petroleum waste sludge in landfarming sites. Biodegradation. 2005;16:169-80 pubmed
    ..T-RFLP fingerprints of bacteria of the genera Enterobacter and Ochrobactrum were detected in the landfarmed soil over the entire treatment period of 14 months...
  75. Yuan Y, Lu Z, Qi X. [Biodegradation of nicotine in tobacco extracts for making reconstituted tobacco by strain DN2]. Sheng Wu Gong Cheng Xue Bao. 2009;25:897-902 pubmed
    ..55 mg/L/h, which was much higher than that reported in other studies. These results indicated that strain DN2 may be useful for reducing nicotine content of reconstituted tobacco...
  76. Batool R, Yrjälä K, Hasnain S. Hexavalent chromium reduction by bacteria from tannery effluent. J Microbiol Biotechnol. 2012;22:547-54 pubmed
    ..An indigenous chromium-reducing bacterial strain, Rb-2, isolated from a tannery water sample, was identified as Ochrobactrum intermedium, on the basis of 16S rRNA gene sequencing...
  77. Huang L, Wang P, Tian J, Jiang H, Wu N, Yang P, et al. Improving the acidic stability of a methyl parathion hydrolase by changing basic residues to acidic residues. Biotechnol Lett. 2012;34:1115-21 pubmed publisher
    ..Their half-lives at pH 5.0 were 64, 68, 65 min, respectively, whereas that of WT was 39 min. The acidic stability of proteins may therefore be improved by changing selected basic amino acid residues to acidic ones...
  78. Bavishi A, Abhishek A, Lin L, Choudhary M. Complex prokaryotic genome structure: rapid evolution of chromosome II. Genome. 2010;53:675-87 pubmed publisher
    ..In summary, rapid evolution of CII may perform particular roles for organisms such as aiding in adapting to specialized niches...
  79. de la Cruz Perera C, Ren D, Blanchet M, Dendooven L, Marsch R, Sørensen S, et al. The ability of soil bacteria to receive the conjugative IncP1 plasmid, pKJK10, is different in a mixed community compared to single strains. FEMS Microbiol Lett. 2013;338:95-100 pubmed publisher
    ..In contrast, for E. coli, transfer was observed only to the mixed community, where Ochrobactrum rhizosphaerae was identified as the dominating plasmid recipient...
  80. Francisco R, Moreno A, Morais P. Different physiological responses to chromate and dichromate in the chromium resistant and reducing strain Ochrobactrum tritici 5bvl1. Biometals. 2010;23:713-25 pubmed publisher
    ..This paper studied comparatively the effect of dichromate and chromate on the physiology of Ochrobactrum tritici strain 5bvl1, a highly Cr(VI)-resistant and reducing microorganism...
  81. Faisal M, Hameed A, Hasnain S. Chromium-resistant bacteria and cyanobacteria: impact on Cr(VI) reduction potential and plant growth. J Ind Microbiol Biotechnol. 2005;32:615-21 pubmed
    Two chromium-resistant bacterial strains, Bacillus cereus S-6 and Ochrobactrum intermedium CrT-1, and two cyanobacterial strains, Oscillatoria sp. and Synechocystis sp., were used in this study...
  82. An T, Zu L, Li G, Wan S, Mai B, Wong P. One-step process for debromination and aerobic mineralization of tetrabromobisphenol-A by a novel Ochrobactrum sp. T isolated from an e-waste recycling site. Bioresour Technol. 2011;102:9148-54 pubmed publisher
    A novel bacterium, Ochrobactrum sp. T, capable of simultaneous debromination and aerobic mineralization of tetrabromobisphenol-A (TBBPA), was isolated from a sludge sample collected from an electronic-waste recycling site...
  83. Razia M, Karthikraja R, Padmanaban K, Chellapandi P, Sivaramakrishnan S. 16S rDNA-based phylogeny of non-symbiotic bacteria of Entorno-pathogenic nematodes from infected insect cadavers. Genomics Proteomics Bioinformatics. 2011;9:104-12 pubmed publisher
    ..Sequence similarity analysis revealed that the strains SRK3, SRK4 and SRK5 belong to Ochrobactrum cytisi, Schineria larvae and Ochrobactrum anthropi, respectively. The isolates O. anthropi and S...
  84. Kumar S, Kumar M, Siddavattam D, Karegoudar T. Generation of continuous packed bed reactor with PVA-alginate blend immobilized Ochrobactrum sp. DGVK1 cells for effective removal of N,N-dimethylformamide from industrial effluents. J Hazard Mater. 2012;199-200:58-63 pubmed publisher
    ..industrial effluents of textile and pharma industries, was demonstrated by using free and immobilized cells of Ochrobactrum sp. DGVK1, a soil isolate capable of utilizing DMF as a sole source of carbon, nitrogen...
  85. Chen C, Cheng C, Chen C, Hsieh M, Lin S, Ho K, et al. Hexavalent chromium removal and bioelectricity generation by Ochrobactrum sp. YC211 under different oxygen conditions. J Environ Sci Health A Tox Hazard Subst Environ Eng. 2016;51:502-8 pubmed publisher
    ..A chromium-reducing bacterial strain, isolated from the vicinity of an electroplate factory, was identified as Ochrobactrum sp. YC211. The efficiency and capacity per time of Ochrobactrum sp...
  86. Johnning A, Moore E, Svensson Stadler L, Shouche Y, Larsson D, Kristiansson E. Acquired genetic mechanisms of a multiresistant bacterium isolated from a treatment plant receiving wastewater from antibiotic production. Appl Environ Microbiol. 2013;79:7256-63 pubmed publisher
    ..We have isolated the extensively drug-resistant Ochrobactrum intermedium CCUG 57381 from an Indian WWTP receiving industrial wastewater from pharmaceutical production ..
  87. Chen X, Wei G, Liu S, Sun J, Wang F, Li H, et al. [Growth kinetics and phenol degradation of highly efficient phenol-degrading Ochrobactrum sp. CH10]. Huan Jing Ke Xue. 2012;33:3956-61 pubmed
    The strain Ochrobactrum sp. CH10 was a highly efficient phenol degrading bacterial strain isolated from soil in a constructed wetland in Yuan Dynasty Capital City Wall Relics in Beijing...
  88. Kampfer P, Scholz H, Huber B, Falsen E, Busse H. Ochrobactrum haematophilum sp. nov. and Ochrobactrum pseudogrignonense sp. nov., isolated from human clinical specimens. Int J Syst Evol Microbiol. 2007;57:2513-8 pubmed
    ..30717T, CCUG 43892 and CCUG 38531T) were shown to belong to the Alphaproteobacteria, most closely related to Ochrobactrum grignonense (99.0 and 98.2% similarity to the type strain)...
  89. Kampfer P, Citron D, Goldstein E, Scholz H. Difficulty in the identification and differentiation of clinically relevant Ochrobactrum species. J Med Microbiol. 2007;56:1571-3 pubmed
  90. Danko A, Saski C, Tomkins J, Freedman D. Involvement of coenzyme M during aerobic biodegradation of vinyl chloride and ethene by Pseudomonas putida strain AJ and Ochrobactrum sp. strain TD. Appl Environ Microbiol. 2006;72:3756-8 pubmed
    ..of coenzyme M in aerobic biodegradation of vinyl chloride and ethene in Pseudomonas putida strain AJ and Ochrobactrum sp. strain TD was demonstrated using PCR, hybridization, and enzyme assays...