alcaligenaceae

Summary

Summary: A family of gram-negative, aerobic, non-spore forming rods or cocci of the order BURKHOLDERIALES, which include . A well-known genera which includes ACHROMOBACTER; ALCALIGENES; and BORDETELLA.

Top Publications

  1. Lee J, Srinivasan S, Kim M. Pigmentiphaga soli sp. nov., a bacterium isolated from soil. J Microbiol. 2011;49:857-61 pubmed publisher
    ..Phylogenetic analyses based on the 16S rRNA gene sequence revealed that the strain belonged to the family Alcaligenaceae in the class Betaproteobacteria...
  2. Srinivasan S, Kim M, Sathiyaraj G, Kim Y, Yang D. Pusillimonas ginsengisoli sp. nov., isolated from soil of a ginseng field. Int J Syst Evol Microbiol. 2010;60:1783-7 pubmed publisher
    ..nov. is proposed. The type strain is DCY25T (=KCTC 22046T =JCM 14767T); strain DCY28 (=KCTC 22047=JCM 14768) is a reference strain...
  3. Dam B, Ghosh W, Das Gupta S. Conjugative Type 4 secretion system of a novel large plasmid from the chemoautotroph Tetrathiobacter kashmirensis and construction of shuttle vectors for Alcaligenaceae. Appl Environ Microbiol. 2009;75:4362-73 pubmed publisher
    Tetrathiobacter spp. and other members of the Alcaligenaceae are metabolically versatile and environmentally significant...
  4. Lüddeke F, Wülfing A, Timke M, Germer F, Weber J, Dikfidan A, et al. Geraniol and geranial dehydrogenases induced in anaerobic monoterpene degradation by Castellaniella defragrans. Appl Environ Microbiol. 2012;78:2128-36 pubmed publisher
    ..GaDH activity was independent of coenzyme A. The irreversible formation of geranic acid allows for a metabolic flux from ?-myrcene via linalool, geraniol, and geranial to geranic acid...
  5. Stolz A, Burger S, Kuhm A, Kampfer P, Busse H. Pusillimonas noertemannii gen. nov., sp. nov., a new member of the family Alcaligenaceae that degrades substituted salicylates. Int J Syst Evol Microbiol. 2005;55:1077-81 pubmed
    ..Achromobacter, Alcaligenes and Bordetella, and suggested that strain BN9(T) represents a member of the family Alcaligenaceae. Different methods for the construction of phylogenetic dendrograms placed the strain separately from all ..
  6. Kampfer P, Falsen E, Langer S, Lodders N, Busse H. Paenalcaligenes hominis gen. nov., sp. nov., a new member of the family Alcaligenaceae. Int J Syst Evol Microbiol. 2010;60:1537-42 pubmed publisher
    ..showed that this bacterium displayed <95 % similarity to all described species of the genera of the family Alcaligenaceae. It grouped within the radiation of the genus Alcaligenes, but showed only 93.0-94...
  7. Kampfer P, Denger K, Cook A, Lee S, Jäckel U, Denner E, et al. Castellaniella gen. nov., to accommodate the phylogenetic lineage of Alcaligenes defragrans, and proposal of Castellaniella defragrans gen. nov., comb. nov. and Castellaniella denitrificans sp. nov. Int J Syst Evol Microbiol. 2006;56:815-9 pubmed
    ..nov. (type strain NKNTAUT = DSM 11046T = CCUG 39541T) is proposed for two strains previously identified as strains of A. defragrans...
  8. Nagai F, Morotomi M, Sakon H, Tanaka R. Parasutterella excrementihominis gen. nov., sp. nov., a member of the family Alcaligenaceae isolated from human faeces. Int J Syst Evol Microbiol. 2009;59:1793-7 pubmed publisher
    ..but formed a separate cluster, indicating that strain YIT 11859(T) represents a novel member of the family Alcaligenaceae. Fatty acid analysis demonstrated the presence of a high concentration of C(18 : 1)omega9c (75 % of the total)...
  9. Ghosh W, Alam M, Roy C, Pyne P, George A, Chakraborty R, et al. Genome implosion elicits host-confinement in Alcaligenaceae: evidence from the comparative genomics of Tetrathiobacter kashmirensis, a pathogen in the making. PLoS ONE. 2013;8:e64856 pubmed publisher
    ..elucidates the genomic basis of the evolution of pathogens alongside free-living organisms within the family Alcaligenaceae of Betaproteobacteria...

More Information

Publications80

  1. Ghosh W, George A, Agarwal A, Raj P, Alam M, Pyne P, et al. Whole-genome shotgun sequencing of the sulfur-oxidizing chemoautotroph Tetrathiobacter kashmirensis. J Bacteriol. 2011;193:5553-4 pubmed publisher
    The chemolithoautotrophic betaproteobacterium Tetrathiobacter kashmirensis belongs to the family Alcaligenaceae and is phylogenetically closely related to pathogens such as Taylorella and Bordetella species...
  2. Gibello A, Vela A, Martin M, Barra Caracciolo A, Grenni P, Fernandez Garayzabal J. Reclassification of the members of the genus Tetrathiobacter Ghosh et al. 2005 to the genus Advenella Coenye et al. 2005. Int J Syst Evol Microbiol. 2009;59:1914-8 pubmed publisher
    ..1-99.7%) within the family Alcaligenaceae. The phenotypic characteristics of the type strains of Advenella incenata, Tetrathiobacter kashmirensis and ..
  3. Cai W, Li Y, Wang P, Niu L, Zhang W, Wang C. Effect of the pollution level on the functional bacterial groups aiming at degrading bisphenol A and nonylphenol in natural biofilms of an urban river. Environ Sci Pollut Res Int. 2016;23:15727-38 pubmed publisher
    ..8 to 77.5 and 10.2 to 162.9 ng L(-1), respectively. Comamonadaceae, Pseudomonadaceae, Alcaligenaceae, Bacillaceae, Sphingomonadacea, Burkholderiaceae, and Rhizobiaceae were the dominant bacterial taxa involved ..
  4. Schürmann M, Deters A, Wübbeler J, Steinbüchel A. A novel 3-sulfinopropionyl coenzyme A (3SP-CoA) desulfinase from Advenella mimigardefordensis strain DPN7T acting as a key enzyme during catabolism of 3,3'-dithiodipropionic acid is a member of the acyl-CoA dehydrogenase superfamily. J Bacteriol. 2013;195:1538-51 pubmed publisher
    ..Concomitantly, we identified the gene product that is responsible for the final desulfination step during catabolism of 3,3'-dithiodipropionate (DTDP), a sulfur-containing precursor substrate for biosynthesis of polythioesters. ..
  5. Yasmin F, Tun H, Konya T, Guttman D, Chari R, Field C, et al. Cesarean Section, Formula Feeding, and Infant Antibiotic Exposure: Separate and Combined Impacts on Gut Microbial Changes in Later Infancy. Front Pediatr. 2017;5:200 pubmed publisher
    ..i>Enterobacteriaceae in later infancy, and a higher ratio of unchanged Enterobacteriaceae to Alcaligenaceae microbiota...
  6. Wu G, Liu J, Ye Z. Characterization of phosphobacteria isolated from eutrophic aquatic ecosystems. Mikrobiologiia. 2009;78:809-15 pubmed
    ..This investigation demonstrated that a eutrophic aquatic ecosystem is a selective source of phosphobacteria and the screened phosphobacteria are a potential alternative to the development of biofertilizers. ..
  7. Li C, Zhang D, Li X, Mbadinga S, Yang S, Liu J, et al. The biofilm property and its correlationship with high-molecular-weight polyacrylamide degradation in a water injection pipeline of Daqing oilfield. J Hazard Mater. 2016;304:388-99 pubmed publisher
    ..11 families) were detected in the biofilm, including Pseudomonadaceae, Rhodocyclaceae, Desulfobulbaceae, Alcaligenaceae, Comamonadaceae, Oxalobacteraceae, Bacteriovoracaceae, Campylobacteraceae, Flavobacteriaceae, Clostridiales ..
  8. Catta Preta C, Dos Santos Pascoalino B, de Souza W, Mottram J, Motta M, Schenkman S. Reduction of Tubulin Expression in Angomonas deanei by RNAi Modifies the Ultrastructure of the Trypanosomatid Protozoan and Impairs Division of Its Endosymbiotic Bacterium. J Eukaryot Microbiol. 2016;63:794-803 pubmed publisher
    ..is a nonpathogenic trypanosomatid that maintains an obligatory endosymbiosis with a bacterium related to the Alcaligenaceae family. Studies of this symbiosis can help us to understand the origin of eukaryotic organelles...
  9. Lee M, Jung H, Woo S, Yoo S, Ten L. Castellaniella daejeonensis sp. nov., isolated from soil. Int J Syst Evol Microbiol. 2010;60:2056-60 pubmed publisher
    ..9 %). Comparative 16S rRNA gene sequence analysis showed that strain MJ06(T) belonged to the family Alcaligenaceae, class Betaproteobacteria, and joined the evolutionary radiation enclosed by the genus Castellaniella...
  10. Yasuda T, Waki M, Fukumoto Y, Hanajima D, Kuroda K, Suzuki K. Characterization of the denitrifying bacterial community in a full-scale rockwool biofilter for compost waste-gas treatment. Appl Microbiol Biotechnol. 2017;101:6779-6792 pubmed publisher
    ..denitrifying enzymes were mainly related to those from Phyllobacteriaceae, Bradyrhizobiaceae, and Alcaligenaceae bacteria and to environmental clones retrieved from agricultural soil, activated sludge, freshwater ..
  11. Tian X, Wu W, Yu Q, Hou M, Gao F, Li X, et al. Bacterial diversity analysis of pork longissimus lumborum following long term ohmic cooking and water bath cooking by amplicon sequencing of 16S rRNA gene. Meat Sci. 2017;123:97-104 pubmed publisher
    ..Brevundimonas, Bacteroidaceae, Lactobacillaceae, uncultured Clostridiales Family_XIII, Alcaligenaceae and Micrococcales were more abundant in LTOH-cooked meat, while only Moraxellaceae were more abundant in WB-..
  12. Conley M, Roberts C, Sharpton T, Iwaniec U, Hord N. Increasing dietary nitrate has no effect on cancellous bone loss or fecal microbiome in ovariectomized rats. Mol Nutr Food Res. 2017;61: pubmed publisher
    ..OVX increased relative abundances of Firmicutes and decreased Bacteroideceae and Alcaligenaceae. Nitrate did not affect the skeleton or fecal microbiome...
  13. Kim M, Rho M, Choi J, Choi H, Park H, Song W, et al. A Metagenomic Analysis Provides a Culture-Independent Pathogen Detection for Atopic Dermatitis. Allergy Asthma Immunol Res. 2017;9:453-461 pubmed publisher
    ..AD was characterized by the domination of Staphylococcus, Pseudomonas, and Streptococcus, whereas Alcaligenaceae (f), Sediminibacterium, and Lactococcus were characteristic of healthy skin...
  14. Lee M, Woo S, Chae M, Ten L. Pusillimonas soli sp. nov., isolated from farm soil. Int J Syst Evol Microbiol. 2010;60:2326-30 pubmed publisher
    ..Comparative 16S rRNA gene sequence analysis showed that strain MJ07(T) belongs to the family Alcaligenaceae, class Betaproteobacteria, and is related most closely to Pusillimonas ginsengisoli KCTC 22046(T) (98...
  15. Tang C, Sun J, Zhou B, Jin C, Liu J, Kan J, et al. Effects of polysaccharides from purple sweet potatoes on immune response and gut microbiota composition in normal and cyclophosphamide treated mice. Food Funct. 2018;9:937-950 pubmed publisher
    ..increased levels of Bacteroidetes, Lachnospiraceae and Oscillospira, but decreased levels of Firmicutes, Alcaligenaceae and Sutterella in normal mice...
  16. Lüddeke F, Dikfidan A, Harder J. Physiology of deletion mutants in the anaerobic ?-myrcene degradation pathway in Castellaniella defragrans. BMC Microbiol. 2012;12:192 pubmed publisher
    ..Growth on cyclic monoterpenes independent of the initial enzyme LDI suggests the presence of a second enzyme system activating unsaturated hydrocarbons. ..
  17. Greetham H, Collins M, Gibson G, Giffard C, Falsen E, Lawson P. Sutterella stercoricanis sp. nov., isolated from canine faeces. Int J Syst Evol Microbiol. 2004;54:1581-4 pubmed
    ..On the basis of the presented findings, a novel species, Sutterella stercoricanis sp. nov., is described. The type strain of Sutterella stercoricanis is 5BAC4T (= CCUG 47620T = CIP 108024T). ..
  18. Bridger N, Drews S, Burdz T, Wiebe D, Pacheco A, Ng B, et al. Isolation and characterization of Pigmentiphaga-like isolates from human clinical material. J Med Microbiol. 2013;62:708-11 pubmed publisher
    ..Features of strains most like Pigmentiphaga daeguensis or Pigmentiphaga kullae from a case of suppurative otitis media in a 6-year-old female post-transplant recipient and in a human stool sample are described. ..
  19. Herzog B, Dötsch A, Lemmer H, Horn H, Müller E. Profiling 5-tolyltriazole biodegrading sludge communities using next-generation sequencing and denaturing gradient gel electrophoresis. Syst Appl Microbiol. 2017;40:508-515 pubmed publisher
    ..Metagenomics (DNA) revealed the dominant families Alcaligenaceae, Pseudomonadaceae and Comamonadaceae that also represented the most active families at the RNA level (..
  20. Carlier A, Cnockaert M, Fehr L, Vandamme P, Eberl L. Draft genome and description of Orrella dioscoreae gen. nov. sp. nov., a new species of Alcaligenaceae isolated from leaf acumens of Dioscorea sansibarensis. Syst Appl Microbiol. 2017;40:11-21 pubmed publisher
    ..and phenotypic characterizations indicate that the isolates belong to a novel genus and species of the Alcaligenaceae family for which we propose the name Orrella dioscoreae gen. nov. sp. nov...
  21. Xia Y, Wübbeler J, Qi Q, Steinbüchel A. Employing a recombinant strain of Advenella mimigardefordensis for biotechnical production of Homopolythioesters from 3,3'-dithiodipropionic acid. Appl Environ Microbiol. 2012;78:3286-97 pubmed publisher
    ..According to our knowledge, this is the first report of PMP homopolymer production by a metabolically engineered bacterium using DTDP, which is nontoxic, as the precursor substrate...
  22. Moon J, Lim J, Ahn J, Weon H, Kwon S, Kim S. Paenalcaligenes suwonensis sp. nov., isolated from spent mushroom compost. Int J Syst Evol Microbiol. 2014;64:882-6 pubmed publisher
    ..nov. is proposed. The type strain is ABC02-12(T) (?=?KACC 16537(T)?=?NBRC 108927(T)). ..
  23. Dean C, Xiao Y, Roberts D. Enriching acid rock drainage related microbial communities from surface-deposited oil sands tailings. Can J Microbiol. 2016;62:870-879 pubmed
  24. Cao B, Ma T, Ren Y, Ren Y, Li G, Li P, et al. Complete genome sequence of Pusillimonas sp. T7-7, a cold-tolerant diesel oil-degrading bacterium isolated from the Bohai Sea in China. J Bacteriol. 2011;193:4021-2 pubmed publisher
    ..The presence of novel genes for the degradation of diesel oils was suggested...
  25. Dam B. A type Ib plasmid segregation machinery of the Advenella kashmirensis plasmid pBTK445. Plasmid. 2011;65:185-91 pubmed publisher
    ..Based on its minimal replication region, a shuttle vector, pBTKS was constructed which can be used for diverse Alcaligenaceae members...
  26. Hunter W, Manter D. Bio-reduction of selenite to elemental red selenium by Tetrathiobacter kashmirensis. Curr Microbiol. 2008;57:83-8 pubmed publisher
    ..This organism might be useful in bioreactors designed to remove selenite from contaminated water...
  27. Jin L, Ko S, Cui Y, Lee C, Oh H, Ahn C, et al. Pusillimonas caeni sp. nov., isolated from a sludge sample of a biofilm reactor. Antonie Van Leeuwenhoek. 2017;110:125-132 pubmed publisher
    ..nov. The type stain is EBR-8-1T (=KCTC 42353T = JCM 30463T). ..
  28. Liu Q, Ten L, Im W, Lee S. Castellaniella caeni sp. nov., a denitrifying bacterium isolated from sludge of a leachate treatment plant. Int J Syst Evol Microbiol. 2008;58:2141-6 pubmed publisher
    ..8%). Comparative 16S rRNA gene sequence analysis showed that strain Ho-11(T) belonged to the family Alcaligenaceae, class Betaproteobacteria, and joined the evolutionary radiation enclosed by the genus Castellaniella...
  29. Kampfer P, Busse H, McInroy J, Glaeser S. Paracandidimonas soli gen. nov., sp. nov., isolated from soil. Int J Syst Evol Microbiol. 2017;67:1740-1745 pubmed publisher
    ..nov., sp. nov., is proposed. The type strain of Paracandidimonas soli is IMT-305T (=DSM 100048T=CIP 110902T=LMG 28740T=CCM 8599T)...
  30. Lee Y, Lee J, Park K, Kim S, Roh S, Lee S, et al. Paenalcaligenes hermetiae sp. nov., isolated from the larval gut of Hermetia illucens (Diptera: Stratiomyidae), and emended description of the genus Paenalcaligenes. Int J Syst Evol Microbiol. 2013;63:4224-9 pubmed publisher
    ..nov. is proposed. The type strain is KBL009(T) (?=?KACC 16840(T)?=?JCM 18423(T)). An emended description of the genus Paenalcaligenes is also provided. ..
  31. Alam M, Pyne P, Mazumdar A, Peketi A, Ghosh W. Kinetic enrichment of 34S during proteobacterial thiosulfate oxidation and the conserved role of SoxB in S-S bond breaking. Appl Environ Microbiol. 2013;79:4455-64 pubmed publisher
    ..Instead, several other redox proteins were found to be at least 2-fold overexpressed during thiosulfate- or tetrathionate-dependent growth, thereby indicating that there is more to tetrathionate oxidation than SoxB alone. ..
  32. Gahlawat G, Srivastava A. Estimation of fundamental kinetic parameters of polyhydroxybutyrate fermentation process of Azohydromonas australica using statistical approach of media optimization. Appl Biochem Biotechnol. 2012;168:1051-64 pubmed publisher
    ..g., design of several bioreactor cultivation strategies to further enhance the biopolymer production...
  33. Chen W, Huang W, Sheu S. Derxia lacustris sp. nov., a nitrogen-fixing bacterium isolated from a freshwater lake. Int J Syst Evol Microbiol. 2013;63:965-70 pubmed publisher
    ..On the basis of the genotypic and phenotypic data, strain HL-12(T) represents a novel species in the genus Derxia, for which the name Derxia lacustris sp. nov. is proposed. The type strain is HL-12(T) (?=?BCRC 80208(T) ?=?KCTC 23311(T))...
  34. Davidson C, Daugulis A. Addressing biofilter limitations: a two-phase partitioning bioreactor process for the treatment of benzene and toluene contaminated gas streams. Biodegradation. 2003;14:415-21 pubmed
  35. Kim S, Yoo S, Weon H, Kim Y, Anandham R, Suh J, et al. Paralcaligenes ureilyticus gen. nov., sp. nov. isolated from soil of a Korean ginseng field. J Microbiol. 2011;49:502-7 pubmed publisher
    ..Based on the 16S rRNA gene sequence, strain GR24-5(T) could be assigned to the family Alcaligenaceae. Strain GR24-5(T) showed the highest sequence similarities with Parapusillimonas granuli Ch07(T) (97...
  36. Chen H, Feng J, Kweon O, Xu H, Cerniglia C. Identification and molecular characterization of a novel flavin-free NADPH preferred azoreductase encoded by azoB in Pigmentiphaga kullae K24. BMC Biochem. 2010;11:13 pubmed publisher
    ..In this study, we report the identification of a novel flavin-free NADPH preferred azoreductase encoded by azoB in Pigmentiphaga kullae K24...
  37. Gahlawat G, Sengupta B, Srivastava A. Enhanced production of poly(3-hydroxybutyrate) in a novel airlift reactor with in situ cell retention using Azohydromonas australica. J Ind Microbiol Biotechnol. 2012;39:1377-84 pubmed publisher
    ..Hence, ALR with cell retention would serve as a better bioreactor design for economic biopolymer production than STR, particularly due to its lower cost of operation and simplicity along with its enhanced oxygen and heat transfer rates...
  38. Vaz Moreira I, Figueira V, Lopes A, De Brandt E, Vandamme P, Nunes O, et al. Candidimonas nitroreducens gen. nov., sp. nov. and Candidimonas humi sp. nov., isolated from sewage sludge compost. Int J Syst Evol Microbiol. 2011;61:2238-46 pubmed publisher
    ..On the basis of 16S rRNA gene sequence analysis, the strains were observed to be members of the family Alcaligenaceae, but could not be identified as members of any validly described genus...
  39. Wiersma L, Reubsaet F, Wolfe A, de Jong P, Grone A. Unilateral granulomatous orchitis in a harbour porpoise (Phocoena phocoena): a case report. Tijdschr Diergeneeskd. 2011;136:94-8 pubmed
    ..Culture of samples taken from the testis revealed a pure culture of a bacterium of the Alcaligenaceae family...
  40. Yoon J, Kang S, Kim W, Oh T. Pigmentiphaga daeguensis sp. nov., isolated from wastewater of a dye works, and emended description of the genus Pigmentiphaga. Int J Syst Evol Microbiol. 2007;57:1188-91 pubmed
    ..nov. is proposed. The type strain is K110(T) (=KCTC 12838(T)=JCM 14330(T))...
  41. Velusamy K, Krishnani K. Heterotrophic nitrifying and oxygen tolerant denitrifying bacteria from greenwater system of coastal aquaculture. Appl Biochem Biotechnol. 2013;169:1978-92 pubmed publisher
    ..Four strains representing Alcaligenaceae family have been isolated from greenwater system and characterized using biochemical test, fatty acid methyl ..
  42. Miller T, Colquhoun D, Halden R. Identification of wastewater bacteria involved in the degradation of triclocarban and its non-chlorinated congener. J Hazard Mater. 2010;183:766-72 pubmed publisher
    ..showed both enrichments were dominated by a single genotype related to uncharacterized organisms within the Alcaligenaceae. Of ?30 sequences from each enrichment, no other organisms were detected in the TCC enrichment while, a small, ..
  43. Felföldi T, Vengring A, Kéki Z, Márialigeti K, Schumann P, Tóth E. Eoetvoesia caeni gen. nov., sp. nov., isolated from an activated sludge system treating coke plant effluent. Int J Syst Evol Microbiol. 2014;64:1920-5 pubmed publisher
    ..16S rRNA gene sequence analysis revealed that strain PB3-7B(T) belonged to the family Alcaligenaceae and showed the highest pairwise sequence similarity to Parapusillimonas granuli Ch07(T) (97...
  44. Vandamme P, De Brandt E, Houf K, de Baere T. Kerstersia similis sp. nov., isolated from human clinical samples. Int J Syst Evol Microbiol. 2012;62:2156-9 pubmed publisher
    ..Therefore, we propose to formally classify this unnamed taxon as Kerstersia similis sp. nov. with strain LMG 5890(T) (= CCUG 46999(T)), isolated from a leg wound in the USA in 1983, as the type strain...
  45. Pence M, Sharon J, McElvania TeKippe E, Pakalniskis B, Ford B, Burnham C. Two cases of Kerstersia gyiorum isolated from sites of chronic infection. J Clin Microbiol. 2013;51:2001-4 pubmed publisher
    ..Both isolates were resistant to ciprofloxacin, which has not been previously reported...
  46. Ugwu C, Tokiwa Y, Ichiba T. Production of (R)-3-hydroxybutyric acid by fermentation and bioconversion processes with Azohydromonas lata. Bioresour Technol. 2011;102:6766-8 pubmed publisher
    ..Bioconversion of resting cells (M5) with glucose (1% v/w), ethylacetoacetate (2% v/v), and (R,S)-1,3-butanediol (3% v/v), resulted in (R)-3-HB concentrations of 6.5 g/l, 7.3g/l and 8.7 g/l, respectively...
  47. Chen Y, Zhang Y, Huang K, Tang S, Cao Y, Shi J, et al. Pigmentiphaga litoralis sp. nov., a facultatively anaerobic bacterium isolated from a tidal flat sediment. Int J Syst Evol Microbiol. 2009;59:521-5 pubmed publisher
    ..analysis based on 16S rRNA gene sequences indicated that strain JSM 061001(T) belongs to the family Alcaligenaceae and was related most closely to the type strains of the two recognized species of the genus Pigmentiphaga...
  48. Zilouei H, Soares A, Murto M, Guieysse B, Mattiasson B. Influence of temperature on process efficiency and microbial community response during the biological removal of chlorophenols in a packed-bed bioreactor. Appl Microbiol Biotechnol. 2006;72:591-9 pubmed
    ..10-30 degrees C) were isolated from the biofilm communities of reactors RA and RB and characterized as Alcaligenaceae bacterium R14C4 and Cupriavidus basilensis R25C6, respectively...
  49. Zafar M, Kumar S, Kumar S, Dhiman A. Artificial intelligence based modeling and optimization of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production process by using Azohydromonas lata MTCC 2311 from cane molasses supplemented with volatile fatty acids: a genetic algorithm paradigm. Bioresour Technol. 2012;104:631-41 pubmed publisher
    ..35 mol%, have been observed in a 3 l bioreactor, respectively. The specific growth rate and P(3HB-co-3HV) accumulation rate of 0.29 per h and 0.16 g/lh determined with cane molasses are comparable to those observed on pure substrates...
  50. Gahlawat G, Srivastava A. Use of NAD(P)H fluorescence measurement for on-line monitoring of metabolic state of Azohydromonas australica in poly(3-hydroxybutyrate) production. Appl Biochem Biotechnol. 2013;169:821-31 pubmed publisher
    ..It was therefore concluded that NAD(P)H fluorescence measurements could be used for indication of the time of fresh nutrient (substrate) feed during substrate limitation to further enhance the PHB production...
  51. Coenye T, Vanlaere E, Samyn E, Falsen E, Larsson P, Vandamme P. Advenella incenata gen. nov., sp. nov., a novel member of the Alcaligenaceae, isolated from various clinical samples. Int J Syst Evol Microbiol. 2005;55:251-6 pubmed
    ..Phenotypically these isolates shared several characteristics with members of the Alcaligenaceae and related genera...
  52. Gahlawat G, Srivastava A. Development of a mathematical model for the growth associated Polyhydroxybutyrate fermentation by Azohydromonas australica and its use for the design of fed-batch cultivation strategies. Bioresour Technol. 2013;137:98-105 pubmed publisher
    ..A significantly high PHB concentration of 22.65 g/L & an overall PHB content of 76% was achieved during constant feed rate fed-batch cultivation which is the highest PHB content reported so far using A. australica...
  53. Wübbeler J, Lütke Eversloh T, Van Trappen S, Vandamme P, Steinbüchel A. Tetrathiobacter mimigardefordensis sp. nov., isolated from compost, a betaproteobacterium capable of utilizing the organic disulfide 3,3'-dithiodipropionic acid. Int J Syst Evol Microbiol. 2006;56:1305-10 pubmed
    ..nov. is proposed. The type strain is strain DPN7(T) (=DSM 17166(T) = LMG 22922(T))...
  54. Hu Y, Wang Q, Jiang Y, Ma R, Xia W, Tang Z, et al. Characterization of oral bacterial diversity of irradiated patients by high-throughput sequencing. Int J Oral Sci. 2013;5:21-5 pubmed publisher
    ..This study contributed to a better understanding of the detailed characterization of oral bacterial diversity of irradiated patients...
  55. Lee S. Pigmentiphaga aceris sp. nov., isolated from tree sap. Int J Syst Evol Microbiol. 2017;67:3198-3202 pubmed publisher
    ..that SAP-32T and SAP-36 formed a distinct cluster with members of the genus Pigmentiphaga within the family Alcaligenaceae. Both strains showed 16S rRNA gene sequence similarity of 100?% to each other...
  56. Park M, Park Y, Jung J, Lee S, Park W, Lee K, et al. Pusillimonas harenae sp. nov., isolated from a sandy beach, and emended description of the genus Pusillimonas. Int J Syst Evol Microbiol. 2011;61:2901-6 pubmed publisher
    ..nov. is proposed; the type strain is B201(T) (=KACC 14927(T)=JCM 16917(T)). An emended description of the genus Pusillimonas is given...
  57. Prakash O, Munot H, Nimonkar Y, Sharma M, Kumbhare S, Shouche Y. Description of Pelistega indica sp. nov., isolated from human gut. Int J Syst Evol Microbiol. 2014;64:1389-94 pubmed publisher
    ..results of the similarity search indicated that the bacterium belongs to the class Betaproteobacteria, family Alcaligenaceae. It showed maximum sequence similarity (96...
  58. Kim M, Srinivasan S, Kim Y, Yang D. Castellaniella ginsengisoli sp. nov., a beta-glucosidase-producing bacterium. Int J Syst Evol Microbiol. 2009;59:2191-4 pubmed publisher
    ..16S rRNA gene sequence analysis showed that strain DCY36T belongs to genus Castellaniella in the family Alcaligenaceae of the class Betaproteobacteria...
  59. Wübbeler J, Bruland N, Kretschmer K, Steinbüchel A. Novel pathway for catabolism of the organic sulfur compound 3,3'-dithiodipropionic acid via 3-mercaptopropionic acid and 3-Sulfinopropionic acid to propionyl-coenzyme A by the aerobic bacterium Tetrathiobacter mimigardefordensis strain DPN7. Appl Environ Microbiol. 2008;74:4028-35 pubmed publisher
    ..Therefore, a new pathway is proposed for the catabolism of DTDP via 3MP, 3SP, and 3SP-CoA toward propionyl-CoA, which is then further catabolized via the 2-methylcitric acid cycle in T. mimigardefordensis...
  60. Glaeser S, Galatis H, Martin K, Kampfer P. Castellaniella hirudinis sp. nov., isolated from the skin of Hirudo verbana. Int J Syst Evol Microbiol. 2013;63:521-5 pubmed publisher
    ..Strain E103(T) therefore represents a novel species of the genus Castellaniella, for which the name Castellaniella hirudinis sp. nov. is proposed, with the type strain E103(T) (?=?CCUG 62394(T)?=?LMG 26910(T))...
  61. Matsuoka M, Park S, An S, Miyahara M, Kim S, Kamino K, et al. Advenella faeciporci sp. nov., a nitrite-denitrifying bacterium isolated from nitrifying-denitrifying activated sludge collected from a laboratory-scale bioreactor treating piggery wastewater. Int J Syst Evol Microbiol. 2012;62:2986-90 pubmed publisher
    ..nov. is proposed. The type strain is M-07(T) (?= JCM 17746(T) ?= KCTC 23732(T))...
  62. Wübbeler J, Raberg M, Brandt U, Steinbüchel A. Dihydrolipoamide dehydrogenases of Advenella mimigardefordensis and Ralstonia eutropha catalyze cleavage of 3,3'-dithiodipropionic acid into 3-mercaptopropionic acid. Appl Environ Microbiol. 2010;76:7023-8 pubmed publisher
    ..Reduction of DTDP was also unequivocally detected with the purified enzymes, although the specific enzyme activities were much lower: 0.7 and 0.5 mkat/kg protein, respectively...
  63. Penloglou G, Chatzidoukas C, Kiparissides C. Microbial production of polyhydroxybutyrate with tailor-made properties: an integrated modelling approach and experimental validation. Biotechnol Adv. 2012;30:329-37 pubmed publisher
    ..The process optimization led to a high intracellular PHB accumulation (up to 95% g of PHB per g of DCW) and the production of different grades (i.e., different molecular weight distributions) of PHB...
  64. Ogawa Y, Lee S, Kasahara K, Koizumi A, Chihara Y, Nakano R, et al. A first case of isolation of Kerstersia gyiorum from urinary tract. J Infect Chemother. 2016;22:265-7 pubmed publisher
    ..He was successfully recovered with exchange of his percutaneous nephrostomy tube and fluoroquinolone internal use treatment. This is the first case report of urinary tract infection due to K. gyiorum. ..
  65. Zhang D, Busse H, Wieser C, Liu H, Zhou Y, Schinner F, et al. Candidimonas bauzanensis sp. nov., isolated from soil, and emended description of the genus Candidimonas Vaz-Moreira et al. 2011. Int J Syst Evol Microbiol. 2012;62:2084-9 pubmed publisher
    ..nov. is proposed. The type strain is BZ59(T) (= DSM 22805(T) = LMG 26046(T) = CGMCC 1.10190(T)). The description of the genus Candidimonas is emended...
  66. Wang G, Yue W, Liu Y, Li F, Xiong M, Zhang H. Biodegradation of the neonicotinoid insecticide Acetamiprid by bacterium Pigmentiphaga sp. strain AAP-1 isolated from soil. Bioresour Technol. 2013;138:359-68 pubmed publisher
    ..On the basis of these results, strain AAP-1 has the potential to be used in the bioremediation of Acetamiprid-contaminated environments. This is the first report of Acetamiprid-degrading isolate from the genus of Pigmentiphaga...
  67. Tekerlekopoulou A, Tsiflikiotou M, Akritidou L, Viennas A, Tsiamis G, Pavlou S, et al. Modelling of biological Cr(VI) removal in draw-fill reactors using microorganisms in suspended and attached growth systems. Water Res. 2013;47:623-36 pubmed publisher
    ..5 mg/l, compared to suspended growth experiments which was K(i) = 8.219 mg/l. The model adequately predicts hexavalent chromium reduction in both batch reactors for all initial concentrations tested...
  68. Almuzara M, Barberis C, Traglia G, Ordoñez A, Famiglietti A, Ramirez M, et al. Isolation of Kerstersia gyiorum from a patient with cholesteatomatous chronic otitis media. J Clin Microbiol. 2012;50:3809-11 pubmed publisher
    ..We emphasize the isolation of members of the family Alcaligenaceae in serious infections and unusual sites and the importance of polyphasic identification addressing the ..
  69. Kim Y, Kim M, Im W, Srinivasan S, Yang D. Parapusillimonas granuli gen. nov., sp. nov., isolated from granules from a wastewater-treatment bioreactor. Int J Syst Evol Microbiol. 2010;60:1401-6 pubmed publisher
    ..nov., sp. nov. is proposed. The type strain of the type species is Ch07(T) (=KCTC 12668(T)=LMG 24012(T))...
  70. Sakon H, Nagai F, Morotomi M, Tanaka R. Sutterella parvirubra sp. nov. and Megamonas funiformis sp. nov., isolated from human faeces. Int J Syst Evol Microbiol. 2008;58:970-5 pubmed publisher
    ..On the basis of 16S rRNA gene sequence similarity, these strains were shown to belong to the family Alcaligenaceae and to be related to the type strain of Sutterella stercoricanis (94...
  71. Li P, Wang L, Feng L. Characterization of a novel Rieske-type alkane monooxygenase system in Pusillimonas sp. strain T7-7. J Bacteriol. 2013;195:1892-901 pubmed publisher
    ..5 at 30°C. Fe(2+) can enhance the activity of the enzyme evidently. This is the first time that an alkane monooxygenase system belonging to the Rieske non-heme iron oxygenase family has been identified in a bacterium...