halobacterium

Summary

Summary: A genus of HALOBACTERIACEAE whose growth requires a high concentration of salt. Binary fission is by constriction.

Top Publications

  1. Bonneau R, Baliga N, Deutsch E, Shannon P, Hood L. Comprehensive de novo structure prediction in a systems-biology context for the archaea Halobacterium sp. NRC-1. Genome Biol. 2004;5:R52 pubmed
    ..The work reported here demonstrates that de novo structure prediction is now a viable option for providing general function information for many proteins of unknown function...
  2. Kish A, DiRuggiero J. Rad50 is not essential for the Mre11-dependent repair of DNA double-strand breaks in Halobacterium sp. strain NRC-1. J Bacteriol. 2008;190:5210-6 pubmed publisher
    The genome of the halophilic archaeon Halobacterium sp...
  3. Zhang R, Zhang C. Multiple replication origins of the archaeon Halobacterium species NRC-1. Biochem Biophys Res Commun. 2003;302:728-34 pubmed
    The genomic sequence of the halophilic archaeon Halobacterium NRC-1 has been analyzed by the Z curve method. The Z curve is a three-dimensional curve that uniquely represents a given DNA sequence...
  4. Akolkar A, Durai D, Desai A. Halobacterium sp. SP1(1) as a starter culture for accelerating fish sauce fermentation. J Appl Microbiol. 2010;109:44-53 pubmed publisher
    Application of Halobacterium sp. SP1(1) for the acceleration of fish sauce fermentation. Traditional fish sauce fermentation was mimicked using Halobacterium sp. SP1(1) as starter culture...
  5. Arahal D, Gutierrez M, Volcani B, Ventosa A. Taxonomic analysis of extremely halophilic archaea isolated from 56-years-old dead sea brine samples. Syst Appl Microbiol. 2000;23:376-85 pubmed
    ..some members of three different genera - Haloarcula (phenons A, B, and C), Haloferax (phenons D and E) and Halobacterium (phenon F) - of the family Halobacteriaceae, some of them never reported to occur in the Dead Sea, such as ..
  6. Gropp F, Grampp B, Stolt P, Palm P, Zillig W. The immunity-conferring plasmid p phi HL from the Halobacterium salinarium phage phi H: nucleotide sequence and transcription. Virology. 1992;190:45-54 pubmed
    ..sequence of the plasmid p phi HL, composing the central 12,041-bp L-region from the temperate phage phi H of Halobacterium salinarium is presented...
  7. Kennedy S, Ng W, Salzberg S, Hood L, DasSarma S. Understanding the adaptation of Halobacterium species NRC-1 to its extreme environment through computational analysis of its genome sequence. Genome Res. 2001;11:1641-50 pubmed
    The genome of the halophilic archaeon Halobacterium sp...
  8. Shannon P, Markiel A, Ozier O, Baliga N, Wang J, Ramage D, et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 2003;13:2498-504 pubmed
    ..a study of protein complexes involved in cellular recovery to DNA damage, inference of a combined physical/functional interaction network for Halobacterium, and an interface to detailed stochastic/kinetic gene regulatory models.
  9. Gruber C, Legat A, Pfaffenhuemer M, Radax C, Weidler G, Busse H, et al. Halobacterium noricense sp. nov., an archaeal isolate from a bore core of an alpine Permian salt deposit, classification of Halobacterium sp. NRC-1 as a strain of H. salinarum and emended description of H. salinarum. Extremophiles. 2004;8:431-9 pubmed
    ..The 16S rDNA sequences of the strains were 97.1% similar to that of the type species of the genus Halobacterium, which was also determined in this work...

More Information

Publications80

  1. Woodson J, Peck R, Krebs M, Escalante Semerena J. The cobY gene of the archaeon Halobacterium sp. strain NRC-1 is required for de novo cobamide synthesis. J Bacteriol. 2003;185:311-6 pubmed
    Genetic and nutritional analyses of mutants of the extremely halophilic archaeon Halobacterium sp...
  2. May B, Dennis P. Evolution and regulation of the gene encoding superoxide dismutase from the archaebacterium Halobacterium cutirubrum. J Biol Chem. 1989;264:12253-8 pubmed
    The gene encoding the manganese-containing superoxide dismutase (SOD) of Halobacterium cutirubrum was isolated and characterized. The gene and 5'- and 3'-untranslated regions were located on a genomic DNA fragment of 1127 nucleotides...
  3. Margolin W, Wang R, Kumar M. Isolation of an ftsZ homolog from the archaebacterium Halobacterium salinarium: implications for the evolution of FtsZ and tubulin. J Bacteriol. 1996;178:1320-7 pubmed
    We have isolated a homolog of the cell division gene ftsZ from the extremely halophilic archaebacterium Halobacterium salinarium...
  4. Hatakeyama T. Amino acid sequences of the ribosomal proteins HL30 and HmaL5 from the archaebacterium Halobacterium marismortui. Biochim Biophys Acta. 1990;1039:343-7 pubmed
    The complete amino acid sequences of the ribosomal proteins HL30 and HmaL5 from the archaebacterium Halobacterium marismortui were determined...
  5. Nutsch T, Oesterhelt D, Gilles E, Marwan W. A quantitative model of the switch cycle of an archaeal flagellar motor and its sensory control. Biophys J. 2005;89:2307-23 pubmed
    By reverse-engineering we have detected eight kinetic phases of the symmetric switch cycle of the Halobacterium salinarum flagellar motor assembly and identified those steps in the switch cycle that are controlled by sensory rhodopsins ..
  6. Hase T, Wakabayashi S, Matsubara H, Kerscher L, Oesterhelt D, Rao K, et al. Complete amino acid sequence of Halobacterium halobium ferredoxin containing an Nepsilon-acetyllysine residue. J Biochem. 1978;83:1657-70 pubmed
    1. The complete amino acid sequence of the 2Fe-2S ferredoxin from Halobacterium halobium was determined to be: (formula see text):2. The apoferredoxin chain consists of 128 amino acid residues and has a molecular weight of 14,330. 3...
  7. Stuart E, Morshed F, Sremac M, Dassarma S. Cassette-based presentation of SIV epitopes with recombinant gas vesicles from halophilic archaea. J Biotechnol. 2004;114:225-37 pubmed
    In earlier studies we demonstrated recombinant gas vesicles from Halobacterium sp. NRC-1, expressing a model six amino acid insert, or native vesicles displaying chemically coupled TNP, each were immunogenic, and antigenic...
  8. Thompson L, Daniels C. Recognition of exon-intron boundaries by the Halobacterium volcanii tRNA intron endonuclease. J Biol Chem. 1990;265:18104-11 pubmed
    The intron-containing tRNA(Trp) precursor from Halobacterium volcanii, like many intron-containing archaebacterial precursor tRNAs, can assume a structure in which the two intron endonuclease cleavage sites are localized in two three-..
  9. Hase T, Wakabayashi S, Matsubara H, Mevarech M, Werber M. Amino acid sequence of 2Fe-2S ferredoxin from an extreme halophile, Halobacterium of the Dead Sea. Biochim Biophys Acta. 1980;623:139-45 pubmed
    The primary structure of the 2Fe-2S ferredoxin from Halobacterium of the Dead Sea was determined and it consisted of 128 amino acid residues including an N epsilon-acetyllysyl residue...
  10. Sremac M, Stuart E. SIVsm Tat, Rev, and Nef1: functional characteristics of r-GV internalization on isotypes, cytokines, and intracellular degradation. BMC Biotechnol. 2010;10:54 pubmed publisher
    Recombinant gas vesicles (r-GV) from Halobacterium sp...
  11. Wang G, Kennedy S, Fasiludeen S, Rensing C, Dassarma S. Arsenic resistance in Halobacterium sp. strain NRC-1 examined by using an improved gene knockout system. J Bacteriol. 2004;186:3187-94 pubmed
    The genome sequence of Halobacterium sp. strain NRC-1 encodes genes homologous to those responsible for conferring resistance to arsenic...
  12. McCready S. The repair of ultraviolet light-induced DNA damage in the halophilic archaebacteria, Halobacterium cutirubrum, Halobacterium halobium and Haloferax volcanii. Mutat Res. 1996;364:25-32 pubmed
    ..that both cyclobutane dimers and 6-4 photoproducts are induced in the extremely halophilic archaebacteria, Halobacterium cutirubrum, Halobacterium halobium and Haloferax volcanii, at similar levels as in other organisms...
  13. Shmuely H, Dinitz E, Dahan I, Eichler J, Fischer D, Shaanan B. Poorly conserved ORFs in the genome of the archaea Halobacterium sp. NRC-1 correspond to expressed proteins. Bioinformatics. 2004;20:1248-53 pubmed
    ..However, it has been claimed that many ORFans may not encode for expressed proteins...
  14. Seidel R, Scharf B, Gautel M, Kleine K, Oesterhelt D, Engelhard M. The primary structure of sensory rhodopsin II: a member of an additional retinal protein subgroup is coexpressed with its transducer, the halobacterial transducer of rhodopsin II. Proc Natl Acad Sci U S A. 1995;92:3036-40 pubmed
    ..Similarities with Htr-I in Halobacterium salinarium suggest a common principle in the phototaxis of extreme halophiles...
  15. Mandelli F, Miranda V, Rodrigues E, Mercadante A. Identification of carotenoids with high antioxidant capacity produced by extremophile microorganisms. World J Microbiol Biotechnol. 2012;28:1781-90 pubmed publisher
    In this study, the carotenoids produced by the extremophile microorganisms Halococcus morrhuae, Halobacterium salinarium and Thermus filiformis were separated and identified by high-performance liquid chromatography connected to a diode ..
  16. Woodson J, Escalante Semerena J. CbiZ, an amidohydrolase enzyme required for salvaging the coenzyme B12 precursor cobinamide in archaea. Proc Natl Acad Sci U S A. 2004;101:3591-6 pubmed publisher
    ..Inactivation of the cbiZ gene in the extremely halophilic archaeon Halobacterium sp. strain NRC-1 blocked the ability of this archaeon to salvage Cbi...
  17. Goo Y, Yi E, Baliga N, Tao W, Pan M, Aebersold R, et al. Proteomic analysis of an extreme halophilic archaeon, Halobacterium sp. NRC-1. Mol Cell Proteomics. 2003;2:506-24 pubmed
    b>Halobacterium sp. NRC-1 insoluble membrane and soluble cytoplasmic proteins were isolated by ultracentrifugation of whole cell lysate...
  18. Baliga N, Bjork S, Bonneau R, Pan M, Iloanusi C, Kottemann M, et al. Systems level insights into the stress response to UV radiation in the halophilic archaeon Halobacterium NRC-1. Genome Res. 2004;14:1025-35 pubmed
    We report a remarkably high UV-radiation resistance in the extremely halophilic archaeon Halobacterium NRC-1 withstanding up to 110 J/m2 with no loss of viability...
  19. Weston A, Baliga N, Bonneau R, Hood L. Systems approaches applied to the study of Saccharomyces cerevisiae and Halobacterium sp. Cold Spring Harb Symp Quant Biol. 2003;68:345-57 pubmed
  20. Sremac M, Stuart E. Recombinant gas vesicles from Halobacterium sp. displaying SIV peptides demonstrate biotechnology potential as a pathogen peptide delivery vehicle. BMC Biotechnol. 2008;8:9 pubmed publisher
    Previous studies indicated that recombinant gas vesicles (r-GV) from a mutant strain of Halobacterium sp...
  21. Berquist B, Dassarma S. An archaeal chromosomal autonomously replicating sequence element from an extreme halophile, Halobacterium sp. strain NRC-1. J Bacteriol. 2003;185:5959-66 pubmed
    ..of an autonomously replicating sequence element from the chromosome of an archaeon, the extreme halophile Halobacterium strain NRC-1...
  22. Rudolph J, Tolliday N, Schmitt C, Schuster S, Oesterhelt D. Phosphorylation in halobacterial signal transduction. EMBO J. 1995;14:4249-57 pubmed
    ..and sequencing of the region upstream of the cheA gene, known to be required for chemo- and phototaxis in Halobacterium salinarium, has identified cheY and cheB analogs which appear to form part of an operon which also includes ..
  23. Zhang W, Brooun A, Mccandless J, Banda P, Alam M. Signal transduction in the archaeon Halobacterium salinarium is processed through three subfamilies of 13 soluble and membrane-bound transducer proteins. Proc Natl Acad Sci U S A. 1996;93:4649-54 pubmed
    ..We identified a large family of transducer proteins in the Archaeon Halobacterium salinarium using a site-specific multiple antigenic peptide antibody raised against 23 amino acids, ..
  24. Stuart E, Morshed F, Sremac M, DasSarma S. Antigen presentation using novel particulate organelles from halophilic archaea. J Biotechnol. 2001;88:119-28 pubmed
    ..Recombinant gas vesicle preparations therefore constitute a new, self-adjuvanting carrier/display vehicle for presentation of an array of peptidyl epitopes...
  25. Karan R, Capes M, DasSarma P, Dassarma S. Cloning, overexpression, purification, and characterization of a polyextremophilic ?-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi. BMC Biotechnol. 2013;13:3 pubmed publisher
    ..enzyme, the bga gene was PCR amplified, cloned, and expressed in the genetically tractable haloarchaeon Halobacterium sp. NRC-1 under the control of a cold shock protein (cspD2) gene promoter...
  26. Gramain A, Diaz G, Demergasso C, Lowenstein T, McGenity T. Archaeal diversity along a subterranean salt core from the Salar Grande (Chile). Environ Microbiol. 2011;13:2105-21 pubmed publisher
    ..These halite crystals contained only species of the genus Halobacterium (Hbt.)...
  27. Baldacci G, Guinet F, Tillit J, Zaccai G, de Recondo A. Functional implications related to the gene structure of the elongation factor EF-Tu from Halobacterium marismortui. Nucleic Acids Res. 1990;18:507-11 pubmed
    The primary structure of the gene for the elongation factor EF-Tu from the halophilic archaebacterium Halobacterium marismortui (hEF-Tu) is described. It is the first gene of a halophilic elongation factor EF-Tu to be sequenced...
  28. Camacho R, Mateos Díaz J, Diaz Montaño D, González Reynoso O, Cordova J. Carboxyl ester hydrolases production and growth of a halophilic archaeon, Halobacterium sp. NRC-1. Extremophiles. 2010;14:99-106 pubmed publisher
    The capability of Halobacterium sp. NRC-1 to synthesize carboxyl ester hydrolases was investigated, and the effect of physicochemical conditions on the growth rate and production of esterases was evaluated...
  29. Sreeramulu K, Schmidt C, Schafer G, Anemuller S. Studies of the electron transport chain of the euryarcheon Halobacterium salinarum: indications for a type II NADH dehydrogenase and a complex III analog. J Bioenerg Biomembr. 1998;30:443-53 pubmed
    The components involved in the respiratory system of the euryarcheon Halobacterium salinarum were investigated by spectroscopic and polarographic techniques. Previous results about the cytochrome composition could be verified...
  30. Patenge N, Haase A, Bolhuis H, Oesterhelt D. The gene for a halophilic beta-galactosidase (bgaH) of Haloferax alicantei as a reporter gene for promoter analyses in Halobacterium salinarum. Mol Microbiol. 2000;36:105-13 pubmed
    ..After transformation of Halobacterium salinarum with a vector-carrying bgaH, the enzyme activity in cell lysates could be readily determined by a ..
  31. Kr ger K, Pfeifer F. Transcript analysis of the c-vac region and differential synthesis of the two regulatory gas vesicle proteins GvpD and GvpE in Halobacterium salinarium PHH4. J Bacteriol. 1996;178:4012-9 pubmed
    b>Halobacterium salinarium PHH4 synthesizes gas vesicles in the stationary growth phase by the expression of 14 gyp genes arranged in two clusters...
  32. DasSarma P, Zamora R, Müller J, Dassarma S. Genome-wide responses of the model archaeon Halobacterium sp. strain NRC-1 to oxygen limitation. J Bacteriol. 2012;194:5530-7 pubmed
    As part of a comprehensive postgenomic investigation of the model archaeon Halobacterium sp. strain NRC-1, we used whole-genome DNA microarrays to compare transcriptional profiles of cells grown under anaerobic or aerobic conditions...
  33. Woodson J, Zayas C, Escalante Semerena J. A new pathway for salvaging the coenzyme B12 precursor cobinamide in archaea requires cobinamide-phosphate synthase (CbiB) enzyme activity. J Bacteriol. 2003;185:7193-201 pubmed
    ..enterica. A cbiP mutant strain of the archaeon Halobacterium sp...
  34. Krah M, Marwan W, Verm glio A, Oesterhelt D. Phototaxis of Halobacterium salinarium requires a signalling complex of sensory rhodopsin I and its methyl-accepting transducer HtrI. EMBO J. 1994;13:2150-5 pubmed
    Sensory rhodopsin I (SRI) is a photoreceptor that mediates phototaxis in the archaeon Halobacterium salinarium. Receptor excitation is relayed to the motility system of the cell by the methyl-accepting transducer protein HtrI...
  35. Ohtani N, Yanagawa H, Tomita M, Itaya M. Identification of the first archaeal Type 1 RNase H gene from Halobacterium sp. NRC-1: archaeal RNase HI can cleave an RNA-DNA junction. Biochem J. 2004;381:795-802 pubmed
    ..We found that the genome of a halophilic archaeon, Halobacterium sp. NRC-1, contains an open reading frame with similarity to Type 1 RNase H...
  36. Müller J, Dassarma S. Genomic analysis of anaerobic respiration in the archaeon Halobacterium sp. strain NRC-1: dimethyl sulfoxide and trimethylamine N-oxide as terminal electron acceptors. J Bacteriol. 2005;187:1659-67 pubmed
    We have investigated anaerobic respiration of the archaeal model organism Halobacterium sp. strain NRC-1 by using phenotypic and genetic analysis, bioinformatics, and transcriptome analysis...
  37. Gan R, Yi E, Chiu Y, Lee H, Kao Y, Wu T, et al. Proteome analysis of Halobacterium sp. NRC-1 facilitated by the biomodule analysis tool BMSorter. Mol Cell Proteomics. 2006;5:987-97 pubmed
    To better understand the extremely halophilic archaeon Halobacterium species NRC-1, we analyzed its soluble proteome by two-dimensional liquid chromatography coupled to electrospray ionization tandem mass spectrometry...
  38. Patenge N, Berendes A, Engelhardt H, Schuster S, Oesterhelt D. The fla gene cluster is involved in the biogenesis of flagella in Halobacterium salinarum. Mol Microbiol. 2001;41:653-63 pubmed
    In this study, a flagella-related protein gene cluster is described for Halobacterium salinarum. The fla gene cluster is located upstream of the flagellin genes flgB1-3 and oriented in the opposite direction...
  39. Robinson C, Webb K, Kaur A, Jaruga P, Dizdaroglu M, Baliga N, et al. A major role for nonenzymatic antioxidant processes in the radioresistance of Halobacterium salinarum. J Bacteriol. 2011;193:1653-62 pubmed publisher
    ..Our analyses of the cellular damage and oxidative stress responses of the archaeon Halobacterium salinarum exposed to ionizing radiation (IR) revealed a critical role played by nonenzymatic antioxidant ..
  40. Arndt E, Kr mer W, Hatakeyama T. Organization and nucleotide sequence of a gene cluster coding for eight ribosomal proteins in the archaebacterium Halobacterium marismortui. J Biol Chem. 1990;265:3034-9 pubmed
    ..the genes for the eight ribosomal proteins HmaL3, HL6, HmaL23, HmaL2, HmaS19, HmaL22, HmaS3, and HmaL29 from Halobacterium marismortui has been cloned and sequenced...
  41. Yang Y, Cui H, Zhou P, Liu S. Halobacterium jilantaiense sp. nov., a halophilic archaeon isolated from a saline lake in Inner Mongolia, China. Int J Syst Evol Microbiol. 2006;56:2353-5 pubmed
    ..According to 16S rRNA gene sequence similarity, strain NG4(T) was phylogenetically related to Halobacterium salinarum DSM 3754(T) (98.2 %) and Halobacterium noricense A1(T) (97.3 %). The DNA G+C content was 64.2 mol%...
  42. Kottemann M, Kish A, Iloanusi C, Bjork S, DiRuggiero J. Physiological responses of the halophilic archaeon Halobacterium sp. strain NRC1 to desiccation and gamma irradiation. Extremophiles. 2005;9:219-27 pubmed
    We report that the halophilic archaeon Halobacterium sp. strain NRC-1 is highly resistant to desiccation, high vacuum and 60Co gamma irradiation. Halobacterium sp...
  43. Rudolph J, Oesterhelt D. Chemotaxis and phototaxis require a CheA histidine kinase in the archaeon Halobacterium salinarium. EMBO J. 1995;14:667-73 pubmed
    ..Here we report the sequence and function of a histidine kinase (CheAH.s.) from Halobacterium salinarium, the first such transmitter in Archaea. The protein CheAH.s...
  44. Shukla H, Dassarma S. Complexity of gas vesicle biogenesis in Halobacterium sp. strain NRC-1: identification of five new proteins. J Bacteriol. 2004;186:3182-6 pubmed
    The genome of Halobacterium sp. strain NRC-1 contains a large gene cluster, gvpMLKJIHGFEDACNO, that is both necessary and sufficient for the production of buoyant gas-filled vesicles...
  45. Blonder J, Conrads T, Yu L, Terunuma A, Janini G, Issaq H, et al. A detergent- and cyanogen bromide-free method for integral membrane proteomics: application to Halobacterium purple membranes and the human epidermal membrane proteome. Proteomics. 2004;4:31-45 pubmed
    ..of 60% methanol was used to extract, solubilize, and tryptically digest proteins within a preparation of Halobacterium (H.) halobium purple membranes...
  46. Tarasov V, Pyatibratov M, Tang S, Dyall Smith M, Fedorov O. Role of flagellins from A and B loci in flagella formation of Halobacterium salinarum. Mol Microbiol. 2000;35:69-78 pubmed
    ..In broth cultures of this mutant, the medium accumulated flagella with basal body-like structures at their ends...
  47. Chen X, Spudich J. Demonstration of 2:2 stoichiometry in the functional SRI-HtrI signaling complex in Halobacterium membranes by gene fusion analysis. Biochemistry. 2002;41:3891-6 pubmed
    A fusion protein in which the C-terminus of Halobacterium salinarum sensory rhodopsin I (SRI) is connected by a flexible linker to the N-terminus of its transducer (HtrI) was constructed and expressed in H. salinarum...
  48. Coker J, DasSarma P, Capes M, Wallace T, McGarrity K, Gessler R, et al. Multiple replication origins of Halobacterium sp. strain NRC-1: properties of the conserved orc7-dependent oriC1. J Bacteriol. 2009;191:5253-61 pubmed publisher
    The eukaryote-like DNA replication system of the model haloarchaeon Halobacterium NRC-1 is encoded within a circular chromosome and two large megaplasmids or minichromosomes, pNRC100 and pNRC200...
  49. Berquist B, DasSarma P, Dassarma S. Essential and non-essential DNA replication genes in the model halophilic Archaeon, Halobacterium sp. NRC-1. BMC Genet. 2007;8:31 pubmed publisher
    ..We have developed a tractable genetic system for knockout analysis of genes in the model halophilic archaeon, Halobacterium sp. NRC-1, and used it to determine which DNA replication genes are essential. ..
  50. Woodson J, Reynolds A, Escalante Semerena J. ABC transporter for corrinoids in Halobacterium sp. strain NRC-1. J Bacteriol. 2005;187:5901-9 pubmed
    ..for the existence of a putative ABC transporter for corrinoid utilization in the extremely halophilic archaeon Halobacterium sp. strain NRC-1...
  51. Charlebois R, Lam W, Cline S, Doolittle W. Characterization of pHV2 from Halobacterium volcanii and its use in demonstrating transformation of an archaebacterium. Proc Natl Acad Sci U S A. 1987;84:8530-4 pubmed
    We determined the complete nucleotide sequence of the 6354-base-pair plasmid pHV2 of the archaebacterium Halobacterium volcanii. This plasmid is present in approximately six copies per chromosome. We have generated a strain, H...
  52. Fukuchi S, Yoshimune K, Wakayama M, Moriguchi M, Nishikawa K. Unique amino acid composition of proteins in halophilic bacteria. J Mol Biol. 2003;327:347-57 pubmed
    ..from their non-halophilic frequencies could have arisen merely as "dragging effects" caused by the compositional shift of the DNA, which would have changed to increase principally the fraction of aspartic acid alone...
  53. Bonneau R, Reiss D, Shannon P, Facciotti M, Hood L, Baliga N, et al. The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo. Genome Biol. 2006;7:R36 pubmed
    ..interactions, and apply the method to predict a large portion of the regulatory network of the archaeon Halobacterium NRC-1...
  54. Kaufmann F, Schroeter B, Hatakeyama T. Primary structures of five ribosomal proteins from the archaebacterium Halobacterium marismortui and their structural relationships to eubacterial and eukaryotic ribosomal proteins. Eur J Biochem. 1989;185:685-93 pubmed
    The complete amino acid sequences of ribosomal proteins L9, L20, L21/22, L24 and L32 from the archaebacterium Halobacterium marismortui were determined...
  55. Kr mer W, Arndt E. Halobacterial S9 operon. Three ribosomal protein genes are cotranscribed with genes encoding a tRNA(Leu), the enolase, and a putative membrane protein in the archaebacterium Haloarcula (Halobacterium) marismortui. J Biol Chem. 1991;266:24573-9 pubmed
    ..The corresponding operon of the archaebacterium Haloarcula marismortui (Halobacterium marismortui was recently reassigned to the genus Haloarcula [Oren, A., Ginzburg, M., Ginzburg, B. Z...
  56. Bolhuis A. Protein transport in the halophilic archaeon Halobacterium sp. NRC-1: a major role for the twin-arginine translocation pathway?. Microbiology. 2002;148:3335-46 pubmed
  57. Ken R, Hackett N. Halobacterium halobium strains lysogenic for phage phi H contain a protein resembling coliphage repressors. J Bacteriol. 1991;173:955-60 pubmed
    ..As a model system we have investigated the phage phi H, which infects the archaebacterium Halobacterium halobium...
  58. Kaur A, Pan M, Meislin M, Facciotti M, El Gewely R, Baliga N. A systems view of haloarchaeal strategies to withstand stress from transition metals. Genome Res. 2006;16:841-54 pubmed
    ..unique and shared responses to chemically similar metals, we have reconstructed physiological behaviors of Halobacterium NRC-1, an archaeal halophile, in sublethal levels of Mn(II), Fe(II), Co(II), Ni(II), Cu(II), and Zn(II)...
  59. Capes M, DasSarma P, Dassarma S. The core and unique proteins of haloarchaea. BMC Genomics. 2012;13:39 pubmed publisher
    ..However, few previous attempts have been made to identify novel genes that would permit survival in such extreme conditions...
  60. Yachai M, Tanasupawat S, Itoh T, Benjakul S, Visessanguan W, Valyasevi R. Halobacterium piscisalsi sp. nov., from fermented fish (pla-ra) in Thailand. Int J Syst Evol Microbiol. 2008;58:2136-40 pubmed publisher
    ..5 mol%. 16S rRNA gene sequence analysis indicated that the isolate represented a member of the genus Halobacterium in the family Halobacteriaceae...
  61. Streif S, Staudinger W, Oesterhelt D, Marwan W. Quantitative analysis of signal transduction in motile and phototactic cells by computerized light stimulation and model based tracking. Rev Sci Instrum. 2009;80:023709 pubmed publisher
    To investigate the responses of Halobacterium salinarum to stimulation with light (phototaxis and photokinesis), we designed an experimental setup consisting of optical devices for automatic video image acquisition and computer-..
  62. Park J, Vreeland R, Cho B, Lowenstein T, Timofeeff M, Rosenzweig W. Haloarchaeal diversity in 23, 121 and 419 MYA salts. Geobiology. 2009;7:515-23 pubmed publisher
    ..Only Haloarcula and Halorubrum DNA was found in 23 MYA salt. Older crystals contained unclassified groups and Halobacterium. The older crystals yielded a unique 55-bp insert within the 16S rRNA V2 region...
  63. Lazaro E, Rodriguez Fonseca C, Porse B, Urena D, Garrett R, Ballesta J. A sparsomycin-resistant mutant of Halobacterium salinarium lacks a modification at nucleotide U2603 in the peptidyl transferase centre of 23 S rRNA. J Mol Biol. 1996;261:231-8 pubmed
    ..A sparsomycin-resistant mutant was isolated for the archaeon Halobacterium salinarium and shown to lack a post-transcriptional modification of U2603 (Escherichia coli numbering U2584), ..
  64. Childs T, Webley W. In vitro assessment of halobacterial gas vesicles as a Chlamydia vaccine display and delivery system. Vaccine. 2012;30:5942-8 pubmed publisher
    ..We explored the use of gas vesicles derived from Halobacterium salinarium as a potential display and delivery vehicle for chlamydial antigens of vaccine interest...
  65. Ventosa A, Gutierrez M, Kamekura M, Dyall Smith M. Proposal to transfer Halococcus turkmenicus, Halobacterium trapanicum JCM 9743 and strain GSL-11 to Haloterrigena turkmenica gen. nov., comb. nov. Int J Syst Bacteriol. 1999;49 Pt 1:131-6 pubmed
    ..nov., comb. nov., and to accommodate Halobacterium trapanicum JCM 9743 and strain GSL-11 in the same species...
  66. Zhang W, Brooun A, Mueller M, Alam M. The primary structures of the Archaeon Halobacterium salinarium blue light receptor sensory rhodopsin II and its transducer, a methyl-accepting protein. Proc Natl Acad Sci U S A. 1996;93:8230-5 pubmed
    Recently, a large family of transducer proteins in the Archaeon Halobacterium salinarium was identified...
  67. Leffers H, Gropp F, Lottspeich F, Zillig W, Garrett R. Sequence, organization, transcription and evolution of RNA polymerase subunit genes from the archaebacterial extreme halophiles Halobacterium halobium and Halococcus morrhuae. J Mol Biol. 1989;206:1-17 pubmed
    ..largest subunits, A, B', B" and C, of the DNA-dependent RNA polymerase were cloned from the extreme halophile Halobacterium halobium and sequenced and their transcription was analyzed...
  68. DeVeaux L, Müller J, Smith J, Petrisko J, Wells D, Dassarma S. Extremely radiation-resistant mutants of a halophilic archaeon with increased single-stranded DNA-binding protein (RPA) gene expression. Radiat Res. 2007;168:507-14 pubmed
    ..and determine the maximum tolerance to ionizing radiation, we exposed cultures of the model halophile Halobacterium sp. NRC-1 to four cycles of irradiation with high doses of 18-20 MeV electrons...
  69. Baliga N, Pan M, Goo Y, Yi E, Goodlett D, Dimitrov K, et al. Coordinate regulation of energy transduction modules in Halobacterium sp. analyzed by a global systems approach. Proc Natl Acad Sci U S A. 2002;99:14913-8 pubmed
    The extremely halophilic archaeon Halobacterium NRC-1 can switch from aerobic energy production (energy from organic compounds) to anaerobic phototrophy (energy from light) by induction of purple membrane biogenesis...
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    The amino acid sequences of three extremely acidic ribosomal proteins, S6, S12, and S15, from Halobacterium marismortui have been determined...
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    Most halobacteria produce gas vesicles (GV). The well-characterized species Halobacterium halobium and some GV+ revertants of GV- mutants of H. halobium produce large amounts of GV which have a spindlelike shape...