Arabidopsis lyrata subsp. lyrata


Alias: Arabis lyrata, Cardaminopsis lyrata, Arabis lyrata subsp. lyrata

Top Publications

  1. Chen X, Facchini P. Short-chain dehydrogenase/reductase catalyzing the final step of noscapine biosynthesis is localized to laticifers in opium poppy. Plant J. 2014;77:173-84 pubmed
  2. Xu J, Wei X, Yan L, Liu D, Ma Y, Guo Y, et al. Identification and functional analysis of phosphorylation residues of the Arabidopsis BOTRYTIS-INDUCED KINASE1. Protein Cell. 2013;4:771-81 pubmed publisher
    ..These in vitro results could provide new hypotheses for more in-depth in vivo studies leading to deeper understanding of how phosphorylation contributes to BIK1 activation and mediates downstream signaling specificity...
  3. Duc C, Benoit M, Détourné G, Simon L, Poulet A, Jung M, et al. Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression. Plant Cell. 2017;29:1773-1793 pubmed publisher
    ..3 occupancy and high expression. Together, our results show that ATRX is involved in H3.3 deposition and emphasize the role of histone chaperones in adjusting genome expression. ..
  4. Gnesutta N, Kumimoto R, Swain S, Chiara M, Siriwardana C, Horner D, et al. CONSTANS Imparts DNA Sequence Specificity to the Histone Fold NF-YB/NF-YC Dimer. Plant Cell. 2017;29:1516-1532 pubmed publisher
  5. South P, Walker B, Cavanagh A, Rolland V, Badger M, Ort D. Bile Acid Sodium Symporter BASS6 Can Transport Glycolate and Is Involved in Photorespiratory Metabolism in Arabidopsis thaliana. Plant Cell. 2017;29:808-823 pubmed publisher
    ..BASS6 and PLGG1 therefore balance the export of two glycolate molecules with the import of one glycerate molecule during photorespiration. ..
  6. Li X, Cai W, Liu Y, Li H, Fu L, Liu Z, et al. Differential TOR activation and cell proliferation in Arabidopsis root and shoot apexes. Proc Natl Acad Sci U S A. 2017;114:2765-2770 pubmed publisher
    ..Together, our findings establish a pivotal hub role of TOR signaling in integrating different environmental signals to regulate distinct developmental transition and growth in the shoot and root. ..
  7. Bahieldin A, Atef A, Edris S, Gadalla N, Ali H, Hassan S, et al. Ethylene responsive transcription factor ERF109 retards PCD and improves salt tolerance in plant. BMC Plant Biol. 2016;16:216 pubmed
    ..Results of knockdown mutant tobacco cells confirmed the influence of these two TFs during PCD. Knockout insertion mutants and over-expression lines indicated the role of ERF109 in conferring salt tolerance in Arabidopsis. ..
  8. Ahn C, Cho H, Lee D, Sim H, Kim S, Pai H. Functional characterization of the ribosome biogenesis factors PES, BOP1, and WDR12 (PeBoW), and mechanisms of defective cell growth and proliferation caused by PeBoW deficiency in Arabidopsis. J Exp Bot. 2016;67:5217-32 pubmed publisher
  9. Shin S, Chung H, Kim S, Nam K. BRI1-EMS-suppressor 1 gain-of-function mutant shows higher susceptibility to necrotrophic fungal infection. Biochem Biophys Res Commun. 2016;470:864-9 pubmed publisher
    ..PDF1.2 expression was not induced in response to fungal pathogen infection in bes1-D. These results suggest that BES1 is also involved in JA-related defense responses, especially in response to necrotrophic pathogens. ..

More Information


  1. Macho A, Schwessinger B, Ntoukakis V, Brutus A, Segonzac C, Roy S, et al. A bacterial tyrosine phosphatase inhibits plant pattern recognition receptor activation. Science. 2014;343:1509-12 pubmed publisher
    ..syringae, reduces EFR phosphorylation and prevents subsequent immune responses. Thus, host and pathogen compete to take control of PRR tyrosine phosphorylation used to initiate antibacterial immunity...
  2. Erkut C, Vasilj A, Boland S, Habermann B, Shevchenko A, Kurzchalia T. Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccation. PLoS ONE. 2013;8:e82473 pubmed publisher
    ..Remarkably, this response is specific and involves a small number of functional pathways, which represent the generic toolkit for anhydrobiosis in plants and animals. ..
  3. Fujita S, Pytela J, Hotta T, Kato T, Hamada T, Akamatsu R, et al. An atypical tubulin kinase mediates stress-induced microtubule depolymerization in Arabidopsis. Curr Biol. 2013;23:1969-78 pubmed publisher
    ..Suppression of the potent tubulin kinase activity by the juxtaposed phosphatase domain tightly controls this stress-activated microtubule regulator...
  4. Liu D, Gong Q, Ma Y, Li P, Li J, Yang S, et al. cpSecA, a thylakoid protein translocase subunit, is essential for photosynthetic development in Arabidopsis. J Exp Bot. 2010;61:1655-69 pubmed publisher
    ..It is inferred that AtcpSecA plays an essential role in chloroplast biogenesis, the absence of which triggered a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression...
  5. Shi H, Shen Q, Qi Y, Yan H, Nie H, Chen Y, et al. BR-SIGNALING KINASE1 physically associates with FLAGELLIN SENSING2 and regulates plant innate immunity in Arabidopsis. Plant Cell. 2013;25:1143-57 pubmed publisher
    ..Our data demonstrate that BSK1 is involved in positive regulation of PTI. Together with previous findings, our work indicates that BSK1 represents a key component directly involved in both BR signaling and plant immunity...
  6. Zheng Z, Guo Y, Nov k O, Dai X, Zhao Y, Ljung K, et al. Coordination of auxin and ethylene biosynthesis by the aminotransferase VAS1. Nat Chem Biol. 2013;9:244-6 pubmed publisher
    ..Our data indicate that VAS1 serves key roles in coordinating the amounts of these two vital hormones...
  7. Indriolo E, Tharmapalan P, Wright S, Goring D. The ARC1 E3 ligase gene is frequently deleted in self-compatible Brassicaceae species and has a conserved role in Arabidopsis lyrata self-pollen rejection. Plant Cell. 2012;24:4607-20 pubmed publisher
    ..Thus, this study demonstrates a conserved role for ARC1 in the self-pollen rejection response within the Brassicaceae...
  8. Kemi U, Niittyvuopio A, Toivainen T, Pasanen A, Quilot Turion B, Holm K, et al. Role of vernalization and of duplicated FLOWERING LOCUS C in the perennial Arabidopsis lyrata. New Phytol. 2013;197:323-35 pubmed publisher
    ..Variation in the FLC1 sequence may cause differences in FLC1 expression between late- and early-flowering A. lyrata populations...
  9. Coleman Derr D, Zilberman D. Deposition of histone variant H2A.Z within gene bodies regulates responsive genes. PLoS Genet. 2012;8:e1002988 pubmed publisher
    ..We propose that H2A.Z deposition in gene bodies promotes variability in levels and patterns of gene expression, and that a major function of genic DNA methylation is to exclude H2A.Z from constitutively expressed genes...
  10. Wang J, Qian D, Fan T, Jia H, An L, Xiang Y. Arabidopsis actin capping protein (AtCP) subunits have different expression patterns, and downregulation of AtCPB confers increased thermotolerance of Arabidopsis after heat shock stress. Plant Sci. 2012;193-194:110-9 pubmed publisher
    ..In conclusion, these results demonstrated that AtCPA and AtCPB showed distinct expression patterns in vivo, and that downregulation of AtCPB conferred increased plant thermotolerance after heat shock stress. ..
  11. Fellenberg C, van Ohlen M, Handrick V, Vogt T. The role of CCoAOMT1 and COMT1 in Arabidopsis anthers. Planta. 2012;236:51-61 pubmed publisher
    ..In vivo localization and phenolic profiling of comt1 plants provide evidence that COMT1 neither contributes to the accumulation of spermidine phenylpropanoid conjugates nor to the flavonol glycoside pattern of pollen grains...
  12. Adio A, Casteel C, De Vos M, Kim J, Joshi V, Li B, et al. Biosynthesis and defensive function of N?-acetylornithine, a jasmonate-induced Arabidopsis metabolite. Plant Cell. 2011;23:3303-18 pubmed publisher
    ..In the case of P. syringae, growth on a nata1 mutant is reduced compared with wild-type Arabidopsis, but growth in vitro is unaffected by N(?)-acetylornithine addition...
  13. Kawanabe T, Fujimoto R. Inflorescence abnormalities occur with overexpression of Arabidopsis lyrata FT in the fwa mutant of Arabidopsis thaliana. Plant Sci. 2011;181:496-503 pubmed publisher
    ..From these results, we suggest that not only does ectopic AtFWA expression inhibit AtFT/AlFT function to delay flowering but that overexpression of AtFWA and AlFT together inhibits AP1 and LFY function to produce abnormal inflorescences...
  14. Pandey S, Wang R, Wilson L, Li S, Zhao Z, Gookin T, et al. Boolean modeling of transcriptome data reveals novel modes of heterotrimeric G-protein action. Mol Syst Biol. 2010;6:372 pubmed publisher
    ..Our method holds significant promise for analyzing analogous 'switch-like' signal transduction events in any organism...
  15. Waller J, Alvarez S, Naponelli V, Lara Nu ez A, Blaby I, Da Silva V, et al. A role for tetrahydrofolates in the metabolism of iron-sulfur clusters in all domains of life. Proc Natl Acad Sci U S A. 2010;107:10412-7 pubmed publisher
    ..Thus COG0354 proteins have an ancient, conserved, folate-dependent function in the activity of certain Fe/S cluster enzymes...