foxtail millet

Summary

Alias: Setaria italica, Setaria italica (L.) P.Beauv.

Top Publications

  1. Fukunaga K, Kawase M, Kato K. Structural variation in the Waxy gene and differentiation in foxtail millet [Setaria italica (L.) P. Beauv.]: implications for multiple origins of the waxy phenotype. Mol Genet Genomics. 2002;268:214-22 pubmed publisher
    The origin and evolution of the waxy type of foxtail millet [Setaria italica (L.) P. Beauv] were studied by analyzing structural variation in the Waxy gene...
  2. Malcomber S, Kellogg E. Heterogeneous expression patterns and separate roles of the SEPALLATA gene LEAFY HULL STERILE1 in grasses. Plant Cell. 2004;16:1692-706 pubmed publisher
    ..We hypothesize that LHS1 may have affected morphological diversification of grass inflorescences by mediating the expression of different floral identity genes in different regions of the floret and spikelet...
  3. Preston J, Kellogg E. Reconstructing the evolutionary history of paralogous APETALA1/FRUITFULL-like genes in grasses (Poaceae). Genetics. 2006;174:421-37 pubmed publisher
    ..These data have allowed us to reconstruct the history of AP1/FUL-like genes in Poaceae and to hypothesize a role for this gene duplication in the evolution of the grass spikelet...
  4. Reinheimer R, Kellogg E. Evolution of AGL6-like MADS box genes in grasses (Poaceae): ovule expression is ancient and palea expression is new. Plant Cell. 2009;21:2591-605 pubmed publisher
    ..However, rice and other species of Oryza have a second copy (orthologous to rice MADS17) that appears to be the result of an ancient duplication...
  5. Peng Y, Zhang J, Cao G, Xie Y, Liu X, Lu M, et al. Overexpression of a PLD?1 gene from Setaria italica enhances the sensitivity of Arabidopsis to abscisic acid and improves its drought tolerance. Plant Cell Rep. 2010;29:793-802 pubmed publisher
    ..Here, we report the cloning and characterization of the full-length cDNA of PLDalpha1 from foxtail millet, which is a cereal crop with high water use efficiency...
  6. Nani T, Schnable J, Washburn J, Albert P, Pereira W, Sobrinho F, et al. Location of low copy genes in chromosomes of Brachiaria spp. Mol Biol Rep. 2018;45:109-118 pubmed publisher
    ..ruziziensis, Brachiaria brizantha, and Brachiaria decumbens using RNAseq data, as well as sequences of Setaria italica and Sorghum bicolor through the fluorescent in situ hybridization technique...
  7. Galla G, Siena L, Ortiz J, Bäumlein H, Barcaccia G, Pessino S, et al. A Portion of the Apomixis Locus of Paspalum Simplex is Microsyntenic with an Unstable Chromosome Segment Highly Conserved Among Poaceae. Sci Rep. 2019;9:3271 pubmed publisher
    ..the apomixis locus, located on a telomeric position of chromosomes 12, 8, 3 and 4 of rice, Sorghum bicolor, Setaria italica and Brachypodium distachyum, respectively, and on a more centromeric position of maize chromosome 1...
  8. Yang Z, Yang W, Li S, Hao J, Su Z, Sun M, et al. Variation of Bacterial Community Diversity in Rhizosphere Soil of Sole-Cropped versus Intercropped Wheat Field after Harvest. PLoS ONE. 2016;11:e0150618 pubmed publisher
    ..suggest sorghum, glutinous millet and buckwheat could be taken into account as intercropping crops with peanut; while hulled oat, mung bean or foxtail millet could be considered for sowing in wheat fields after harvest in North China.
  9. Covshoff S, Szecowka M, Hughes T, Smith Unna R, Kelly S, Bailey K, et al. C4 Photosynthesis in the Rice Paddy: Insights from the Noxious Weed Echinochloa glabrescens. Plant Physiol. 2016;170:57-73 pubmed publisher
    ..The arid-grown species Setaria italica (C4) and Brachypodium distachyon (C3) were also found to accumulate chloroplastic phosphoenolpyruvate ..

More Information

Publications112 found, 100 shown here

  1. Sebastian J, Yee M, Goudinho Viana W, Rellán Álvarez R, Feldman M, Priest H, et al. Grasses suppress shoot-borne roots to conserve water during drought. Proc Natl Acad Sci U S A. 2016;113:8861-6 pubmed publisher
    ..viridis under certain stress conditions. Crown roots of Zea mays and Setaria italica, domesticated relatives of teosinte and S...
  2. Yu X, Kimball J, Milla Lewis S. High density genetic maps of St. Augustinegrass and applications to comparative genomic analysis and QTL mapping for turf quality traits. BMC Plant Biol. 2018;18:346 pubmed publisher
    ..Augustinegrass, foxtail millet, sorghum, and rice diverged from a common ancestor...
  3. Qi H, Yang J, Yin C, Zhao J, Ren X, Jia S, et al. Analysis of Pyricularia oryzae and P. grisea from Different Hosts Based on Multilocus Phylogeny and Pathogenicity Associated with Host Preference in China. Phytopathology. 2019;: pubmed publisher
    ..grisea, and another 103 isolates from crabgrass, green bristlegrass, goose grass, foxtail millet, wild millet, rice and sedge belonged to P. oryzae...
  4. Ghimire B, Yu C, Kim S, Chung I. Assessment of Diversity in the Accessions of Setaria italica L. Based on Phytochemical and Morphological Traits and ISSR Markers. Molecules. 2019;24: pubmed publisher
    ..was carried out to evaluate genetic diversity, phenolic compound composition, and biological activity of Setaria italica L. collected from different parts of South Korea...
  5. Cao X, Hu L, Chen X, Zhang R, Cheng D, Li H, et al. Genome-wide analysis and identification of the low potassium stress responsive gene SiMYB3 in foxtail millet (Setariaitalica L.). BMC Genomics. 2019;20:136 pubmed publisher
    Potassium (K) is essential to plant growth and development. Foxtail millet (Setaria italic L...
  6. Liu D, Li J, Lu J, Tian B, Liu X, Yang G, et al. Cloning and functional analysis of four O-Acetylserine (thiol) lyase family genes from foxtail millet. Plant Physiol Biochem. 2019;139:325-332 pubmed publisher
    ..Here in this study, we obtained four SiOASTL genes (SiOASTL7, SiOASTL8, SiOASTL9 and SiOASTL10) from foxtail millet and analyzed their potential functions...
  7. Han Y, Yang H, Wu M, Yi H. Enhanced drought tolerance of foxtail millet seedlings by sulfur dioxide fumigation. Ecotoxicol Environ Saf. 2019;178:9-16 pubmed publisher
    ..and molecular changes that are induced by SO2 fumigation to improve the drought tolerance of foxtail millet seedlings...
  8. Yang R, Chen M, Sun J, Yu Y, Min D, Chen J, et al. Genome-Wide Analysis of LIM Family Genes in Foxtail Millet (Setaria italica L.) and Characterization of the Role of SiWLIM2b in Drought Tolerance. Int J Mol Sci. 2019;20: pubmed publisher
    ..However, the LIM gene family has not yet been characterized in foxtail millet. In this study, we analyzed the whole genome of foxtail millet and identified 10 LIM genes...
  9. Worthington M, Ebina M, Yamanaka N, Heffelfinger C, Quintero C, Zapata Y, et al. Translocation of a parthenogenesis gene candidate to an alternate carrier chromosome in apomictic Brachiaria humidicola. BMC Genomics. 2019;20:41 pubmed publisher
    ..Comparative genomics with Setaria italica provided confirmation for x = 6 as the base chromosome number of B. humidicola...
  10. Shi J, Ma X, Zhang J, Zhou Y, Liu M, Huang L, et al. Chromosome conformation capture resolved near complete genome assembly of broomcorn millet. Nat Commun. 2019;10:464 pubmed publisher
    ..About ~86.2% of the syntenic genes in foxtail millet have two homologous copies in broomcorn millet, indicating rare gene loss after tetraploidization in broomcorn ..
  11. Heidari H, Yosefi M, Sasani S, Nosratti I. Effect of irrigation with detergent-containing water on foxtail millet shoot biomass and ion accumulation. Environ Sci Pollut Res Int. 2019;26:6328-6335 pubmed publisher
    ..study the impact of irrigation by contaminated water on shoot biomass and seed germination of foxtail millet (Setaria italica) was investigated. The research was conducted as laboratory and pot experiments. Iso-potentials (- 0...
  12. Chen L, Li Y, Li C, Shi Y, Song Y, Zhang D, et al. Genome-wide analysis of the pentatricopeptide repeat gene family in different maize genomes and its important role in kernel development. BMC Plant Biol. 2018;18:366 pubmed publisher
    ..largest gene families in land plants (450 PPR genes in Arabidopsis, 477 PPR genes in rice and 486 PPR genes in foxtail millet) and is important for plant development and growth...
  13. Ren X, Yin R, Hou D, Xue Y, Zhang M, Diao X, et al. The Glucose-Lowering Effect of Foxtail Millet in Subjects with Impaired Glucose Tolerance: A Self-Controlled Clinical Trial. Nutrients. 2018;10: pubmed publisher
    b>Foxtail millet has relatively low starch digestibility and moderate glycemic index compared to other grains...
  14. Liu J, Zhang A, Li S, Zhao W, Zhang Y, Xing G. [Determination of flavor compounds in foxtail millet wine by gas chromatography-mass spectrometry coupled with headspace solid phase microextraction]. Se Pu. 2017;35:1184-1191 pubmed publisher
    To comprehensively understand flavor compounds and aroma characteristics of foxtail millet wine, extraction conditions were optimized with 85 μm polyacrylate (PA), 100 μm polydimethylsiloxane (PDMS), 75 μm carboxen (CAR)/PDMS and 50/30 ..
  15. Pan J, Li Z, Wang Q, Garrell A, Liu M, Guan Y, et al. Comparative proteomic investigation of drought responses in foxtail millet. BMC Plant Biol. 2018;18:315 pubmed publisher
    Foxtail millet (Setaria italica L. P...
  16. Sagart L, Hsu T, Tsai Y, Wu C, Huang L, Chen Y, et al. A northern Chinese origin of Austronesian agriculture: new evidence on traditional Formosan cereals. Rice (N Y). 2018;11:57 pubmed publisher
    ..Early and traditional Formosan agriculture was based on foxtail millet, broomcorn millet and rice...
  17. Babu A, Mohan R, Parimalavalli R. Effect of single and dual-modifications on stability and structural characteristics of foxtail millet starch. Food Chem. 2019;271:457-465 pubmed publisher
    b>Foxtail millet starch was modified by annealing (AS), ultra-sonication (US) and a combination of the two treatments (annealing and ultra-sonication (AUS) or ultra-sonication and annealing (UAS)) and they were characterized...
  18. Feldman M, Ellsworth P, Fahlgren N, Gehan M, Cousins A, Baxter I. Components of Water Use Efficiency Have Unique Genetic Signatures in the Model C4 Grass Setaria. Plant Physiol. 2018;178:699-715 pubmed publisher
    ..utilizes a high-throughput phenotyping platform to quantify plant size and water use of an interspecific Setaria italica × Setaria viridis recombinant inbred line population at daily intervals in both well-watered and ..
  19. Peng S, Wang R, Yang L, He L, He X, Liu X. Biosorption of copper, zinc, cadmium and chromium ions from aqueous solution by natural foxtail millet shell. Ecotoxicol Environ Saf. 2018;165:61-69 pubmed publisher
    ..behaviors and the mechanisms of copper (Cu), zinc (Zn), cadmium (Cd) and chromium (Cr) ions, respectively onto foxtail millet shell as a new natural biosorbent in aqueous solution. The effects of pH (2.0-6.0), contact time (5.0-240...
  20. Wang Z, Zhao K, Pan Y, Wang J, Song X, Ge W, et al. Genomic, expressional, protein-protein interactional analysis of Trihelix transcription factor genes in Setaria italia and inference of their evolutionary trajectory. BMC Genomics. 2018;19:665 pubmed publisher
    ..Until now, genome-wide identification and analysis of this gene family in foxtail millet has not been available...
  21. Yi F, Chen J, Yu J. Global analysis of uncapped mRNA changes under drought stress and microRNA-dependent endonucleolytic cleavages in foxtail millet. BMC Plant Biol. 2015;15:241 pubmed publisher
    ..of RNA ends (PARE), we performed a global study of uncapped mRNAs under drought stress in foxtail millet (Setaria italica [L.] P. Beauv.)...
  22. Lin J, Yu C, Chang Y, Chen S, Li W. Maize and millet transcription factors annotated using comparative genomic and transcriptomic data. BMC Genomics. 2014;15:818 pubmed publisher
    ..In this study, maize (Zea mays) and foxtail millet (Setaria italica), two important species for the study of C4 photosynthesis and kranz anatomy, were selected...
  23. Hu Z, Mbacké B, Perumal R, Guèye M, Sy O, Bouchet S, et al. Population genomics of pearl millet (Pennisetum glaucum (L.) R. Br.): Comparative analysis of global accessions and Senegalese landraces. BMC Genomics. 2015;16:1048 pubmed publisher
    ..A comparison of pearl millet GBS linkage map with the foxtail millet (Setaria italica) and sorghum (Sorghum bicolor) genomes indicated extensive regions of synteny, as well as some large-scale ..
  24. Sharma S, Saxena D, Riar C. Characteristics of β-glucan extracted from raw and germinated foxtail (Setaria italica) and kodo (Paspalum scrobiculatum) millets. Int J Biol Macromol. 2018;118:141-148 pubmed publisher
    ..74%, 48.98%) compared to foxtail millet (34.96%, 38.67%), respectively...
  25. Liu J, Song C, Li Q, Xu Z, Zhang D, Zhang M, et al. A colonized millet grain method for Agrobacterium-mediated transformation of the button mushroom Agaricus bisporus. J Microbiol Methods. 2018;152:148-153 pubmed publisher
    ..bisporus using foxtail millet (Setaria italica L. Beauv) grains as cultivation and infection media...
  26. Sudhakar C, Veeranagamallaiah G, Nareshkumar A, Sudhakarbabu O, Sivakumar M, Pandurangaiah M, et al. Polyamine metabolism influences antioxidant defense mechanism in foxtail millet (Setaria italica L.) cultivars with different salinity tolerance. Plant Cell Rep. 2015;34:141-56 pubmed publisher
    ..in regulating the induction of antioxidant defense enzymes under salt stress condition in two foxtail millet (Setaria italica L.) cultivars, namely Prasad, a salt-tolerant, and Lepakshi, a salt-sensitive cultivar was conducted...
  27. Yan H, Jiang C, Li X, Sheng L, Dong Q, Peng X, et al. PIGD: a database for intronless genes in the Poaceae. BMC Genomics. 2014;15:832 pubmed publisher
    ..Five Poaceae species, Sorghum bicolor, Zea mays, Setaria italica, Panicum virgatum and Brachypodium distachyon, are included in the current release of PIGD...
  28. Yadav C, Bonthala V, Muthamilarasan M, Pandey G, Khan Y, Prasad M. Genome-wide development of transposable elements-based markers in foxtail millet and construction of an integrated database. DNA Res. 2015;22:79-90 pubmed publisher
    ..2%). A total of 134 Repeat Junction Markers were screened in 96 accessions of Setaria italica and 3 wild Setaria accessions of which 30 showed polymorphism...
  29. Fang H, Jing T, Liu Z, Zhang L, Jin Z, Pei Y. Hydrogen sulfide interacts with calcium signaling to enhance the chromium tolerance in Setaria italica. Cell Calcium. 2014;56:472-81 pubmed publisher
    ..with H2S to produce a complex physiological response, which enhanced the Cr(6+) tolerance in foxtail millet (Setaria italica). Results indicate that Cr(6+) stress activated endogenous H2S synthesis as well as Ca(2+) signaling...
  30. Han Y, Wu M, Hao L, Yi H. Sulfur dioxide derivatives alleviate cadmium toxicity by enhancing antioxidant defence and reducing Cd2+ uptake and translocation in foxtail millet seedlings. Ecotoxicol Environ Saf. 2018;157:207-215 pubmed publisher
    ..the possible roles and regulation mechanisms of SO2 in alleviating Cd2+ toxicity in foxtail millet seedlings. Exogenous SO2 derivatives (0...
  31. Zhang H, Xiao W, Yu W, Yao L, Li L, Wei J, et al. Foxtail millet SiHAK1 excites extreme high-affinity K+ uptake to maintain K+ homeostasis under low K+ or salt stress. Plant Cell Rep. 2018;37:1533-1546 pubmed publisher
    ..Here, we identified 29 putative HAK/KUP/KT proteins from the Setaria italica genome database...
  32. Zhu Y, Xie X, Li Z, Bai H, Dong L, Dong Z, et al. Bioinformatic analysis of the nucleotide binding site-encoding disease-resistance genes in foxtail millet (Setaria italica (L.) Beauv.). Genet Mol Res. 2014;13:6602-9 pubmed publisher
    ..candidate genes, which encode the NBS sequence, was filtered in the genomes of two varieties of foxtail millet (Yugu1 and 'Zhang gu')...
  33. Zhang L, Liu R. Phenolic and carotenoid profiles and antiproliferative activity of foxtail millet. Food Chem. 2015;174:495-501 pubmed publisher
    Commonly consumed foxtail millet varieties Jingu28 and Jingu34 were compared in terms of phytochemical composition, antioxidant property, and antiproliferative activity...
  34. Chiapello H, Mallet L, Guérin C, Aguileta G, Amselem J, Kroj T, et al. Deciphering Genome Content and Evolutionary Relationships of Isolates from the Fungus Magnaporthe oryzae Attacking Different Host Plants. Genome Biol Evol. 2015;7:2896-912 pubmed publisher
    ..oryzae isolates differing in host specificity (rice, foxtail millet, wheat, and goosegrass), and one Magnaporthe grisea isolate specific of crabgrass...
  35. Feng Z, Xu Z, Sun J, Li L, Chen M, Yang G, et al. Investigation of the ASR family in foxtail millet and the role of ASR1 in drought/oxidative stress tolerance. Plant Cell Rep. 2016;35:115-28 pubmed publisher
    Six foxtail millet ASR genes were regulated by various stress-related signals. Overexpression of ASR1 increased drought and oxidative tolerance by controlling ROS homeostasis and regulating oxidation-related genes in tobacco plants...
  36. Deng Z, Qin L, Gao Y, Weisskopf A, Zhang C, Fuller D. From Early Domesticated Rice of the Middle Yangtze Basin to Millet, Rice and Wheat Agriculture: Archaeobotanical Macro-Remains from Baligang, Nanyang Basin, Central China (6700-500 BC). PLoS ONE. 2015;10:e0139885 pubmed publisher
    ..In later periods the sites has evidence for mixed farming of both rice and millets (Setaria italica and Panicum miliaceum). Soybean appears on the site in the Shijiahe period (ca...
  37. Zhao Y, Weng Q, Song J, Ma H, Yuan J, Dong Z, et al. Bioinformatics Analysis of NBS-LRR Encoding Resistance Genes in Setaria italica. Biochem Genet. 2016;54:232-48 pubmed publisher
    ..In this paper, comprehensive analysis of NBS-encoding genes is performed in the whole Setaria italica genome...
  38. Wang X, Fuller B, Zhang P, Hu S, Hu Y, Shang X. Millet manuring as a driving force for the Late Neolithic agricultural expansion of north China. Sci Rep. 2018;8:5552 pubmed publisher
    ..Here we present an isotopic dataset for archaeological foxtail millet (Setaria italica) and common millet (Panicum miliaceum) grains as well as associated faunal remains (both domesticated and ..
  39. Fahlgren N, Feldman M, Gehan M, Wilson M, Shyu C, Bryant D, et al. A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria. Mol Plant. 2015;8:1520-35 pubmed publisher
    ..In a 4-week experiment, wild Setaria viridis and domesticated Setaria italica had fundamentally different temporal responses to water availability...
  40. Ning N, Yuan X, Dong S, Wen Y, Gao Z, Guo M, et al. Increasing Selenium and Yellow Pigment Concentrations in Foxtail Millet (Setaria italica L.) Grain with Foliar Application of Selenite. Biol Trace Elem Res. 2016;170:245-52 pubmed publisher
    ..it is unclear whether exogenous Se is linked to nutritional and functional components in foxtail millet (Setaria italica L.)...
  41. Ermawar R, Collins H, Byrt C, Henderson M, O Donovan L, Shirley N, et al. Genetics and physiology of cell wall polysaccharides in the model C4 grass, Setaria viridis spp. BMC Plant Biol. 2015;15:236 pubmed publisher
    ..Orthologous relationship of the CesA and Poales-specific cellulose synthase-like (Csl) genes among Setaria italica (Si), Sorghum bicolor (Sb), Oryza sativa (Os), Brachypodium distachyon (Bradi) and Hordeum vulgare (Hv) were ..
  42. Zhang J, Lu H, Wu N, Yang X, Diao X. Phytolith analysis for differentiating between foxtail millet (Setaria italica) and green foxtail (Setaria viridis). PLoS ONE. 2011;6:e19726 pubmed publisher
    Foxtail millet (Setaria italica) is one of the oldest domesticated cereal crops in Eurasia, but identifying foxtail millets, especially in charred grains, and differentiating it from its wild ancestor, green foxtail (Setaria viridis), in ..
  43. Ning N, Yuan X, Dong S, Wen Y, Gao Z, Guo M, et al. Grain Yield and Quality of Foxtail Millet (Setaria italica L.) in Response to Tribenuron-Methyl. PLoS ONE. 2015;10:e0142557 pubmed publisher
    Foxtail millet (Setaria italica L.) is cultivated around the world for human and animal consumption. There is no suitable herbicide available for weed control in foxtail millet fields during the post-emergence stage...
  44. Theerawitaya C, Yamada Kato N, Singh H, Cha Um S, Takabe T. Isolation, expression, and functional analysis of developmentally regulated plasma membrane polypeptide 1 (DREPP1) in Sporobolus virginicus grown under alkali salt stress. Protoplasma. 2018;255:1423-1432 pubmed publisher
    ..The isolated gene showed high homology to DREPP homologs from C4 grasses, Setaria italica, and Panicum hallii as well as rice (OsDREPP1). The encoded protein contained 202 amino acid residues...
  45. Li W, Chen M, Zhong L, Liu J, Xu Z, Li L, et al. Overexpression of the autophagy-related gene SiATG8a from foxtail millet (Setaria italica L.) confers tolerance to both nitrogen starvation and drought stress in Arabidopsis. Biochem Biophys Res Commun. 2015;468:800-6 pubmed publisher
    ..Autophagy is known to be involved in responses to low nitrogen stress in Arabidopsis. Foxtail millet has strong abiotic stress resistance to both low nutrient and drought stress...
  46. He S, Yang Y, Morrell P, Yi T. Nucleotide Sequence Diversity and Linkage Disequilibrium of Four Nuclear Loci in Foxtail Millet (Setaria italica). PLoS ONE. 2015;10:e0137088 pubmed publisher
    Foxtail millet (Setaria italica (L.) Beauv) is one of the earliest domesticated grains, which has been cultivated in northern China by 8,700 years before present (YBP) and across Eurasia by 4,000 YBP...
  47. Liu H, Liu H, Zhou L, Zhang Z, Zhang X, Wang M, et al. Parallel Domestication of the Heading Date 1 Gene in Cereals. Mol Biol Evol. 2015;32:2726-37 pubmed publisher
    ..In contrast, in foxtail millet, association mapping of HD1 showed a common causal site with a splicing variant from "GT" to "AT" that was ..
  48. Ren X, Chen J, Molla M, Wang C, Diao X, Shen Q. In vitro starch digestibility and in vivo glycemic response of foxtail millet and its products. Food Funct. 2016;7:372-9 pubmed publisher
    b>Foxtail millet, as a leading variety in arid and semi-arid areas of Asia and Africa, can provide broad potential benefits to human health. However, its digestion properties have not been reported...
  49. Borrayo E, Machida Hirano R, Takeya M, Kawase M, Watanabe K. Principal components analysis--K-means transposon element based foxtail millet core collection selection method. BMC Genet. 2016;17:42 pubmed publisher
    ..Using a collection of (Setaria italica sbsp. italica (L.) P. Beauv...
  50. Yadav A, Khan Y, Prasad M. Dehydration-responsive miRNAs in foxtail millet: genome-wide identification, characterization and expression profiling. Planta. 2016;243:749-66 pubmed publisher
    ..regulatory networks under dehydration stress remain largely unexplored in plant including foxtail millet (Setaria italica), which is a natural abiotic stress tolerant crop...
  51. Wang Y, Li L, Tang S, Liu J, Zhang H, Zhi H, et al. Combined small RNA and degradome sequencing to identify miRNAs and their targets in response to drought in foxtail millet. BMC Genet. 2016;17:57 pubmed publisher
    Foxtail millet (Setaria italica) is a diploid C4 panicoid species...
  52. Yoshida K, Saunders D, Mitsuoka C, Natsume S, Kosugi S, Saitoh H, et al. Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements. BMC Genomics. 2016;17:370 pubmed publisher
    ..oryzae isolates from rice (Oryza sativa), one from foxtail millet (Setaria italica), three from wild foxtail millet S...
  53. Zhang K, Fan G, Zhang X, Zhao F, Wei W, Du G, et al. Identification of QTLs for 14 Agronomically Important Traits in Setaria italica Based on SNPs Generated from High-Throughput Sequencing. G3 (Bethesda). 2017;7:1587-1594 pubmed publisher
    Foxtail millet (Setaria italica) is an important crop possessing C4 photosynthesis capability. The S...
  54. Pradeep P, Sreerama Y. Phenolic antioxidants of foxtail and little millet cultivars and their inhibitory effects on ?-amylase and ?-glucosidase activities. Food Chem. 2018;247:46-55 pubmed publisher
    ..Little millet cultivars showed superior inhibition of ?-amylase and ?-glucosidase than foxtail millet cultivars. The soluble and bound fractions of CO7 cultivar of foxtail millet (IC50, 22.37 and 57...
  55. Sapkota S, Conner J, Hanna W, Simon B, Fengler K, Deschamps S, et al. In Silico and Fluorescence In Situ Hybridization Mapping Reveals Collinearity between the Pennisetum squamulatum Apomixis Carrier-Chromosome and Chromosome 2 of Sorghum and Foxtail Millet. PLoS ONE. 2016;11:e0152411 pubmed publisher
    ..squamulatum is collinear with chromosome 2 of foxtail millet and sorghum outside of the ASGR...
  56. Fang X, Dong K, Wang X, Liu T, He J, Ren R, et al. A high density genetic map and QTL for agronomic and yield traits in Foxtail millet [Setaria italica (L.) P. Beauv]. BMC Genomics. 2016;17:336 pubmed publisher
    Foxtail millet [Setaria italica (L.) P. Beauv.], a crop of historical importance in China, has been adopted as a model crop for studying C-4 photosynthesis, stress biology and biofuel traits...
  57. Xiang J, Tang S, Zhi H, Jia G, Wang H, Diao X. Loose Panicle1 encoding a novel WRKY transcription factor, regulates panicle development, stem elongation, and seed size in foxtail millet [Setaria italica (L.) P. Beauv.]. PLoS ONE. 2017;12:e0178730 pubmed publisher
    Panicle development is an important agronomic trait that aids in determining crop productivity. Foxtail millet and its wild ancestor green foxtail have recently been used as model systems to dissect gene functions...
  58. Lian Y, Meng X, Yang Z, Wang T, Ali S, Yang B, et al. Strategies for reducing the fertilizer application rate in the ridge and furrow rainfall harvesting system in semiarid regions. Sci Rep. 2017;7:2644 pubmed publisher
    ..the effects of different fertilizer rates (N:P) on plant nutrient uptake and nutrient use efficiency (NuUE) in foxtail millet using this planting method, as well as the available nutrient residues in the soil...
  59. Aidoo M, Bdolach E, Fait A, Lazarovitch N, Rachmilevitch S. Tolerance to high soil temperature in foxtail millet (Setaria italica L.) is related to shoot and root growth and metabolism. Plant Physiol Biochem. 2016;106:73-81 pubmed publisher
    ..Three foxtail millet (Setaria italica L...
  60. Muthusamy S, Dalal M, Chinnusamy V, Bansal K. Genome-wide identification and analysis of biotic and abiotic stress regulation of small heat shock protein (HSP20) family genes in bread wheat. J Plant Physiol. 2017;211:100-113 pubmed publisher
    ..with sequenced grass genomes (Oryza sativa, Sorghum bicolor, Zea mays, Brachypodium distachyon and Setaria italica)...
  61. Zhang W, Xu J, Bennetzen J, Messing J. Teff, an Orphan Cereal in the Chloridoideae, Provides Insights into the Evolution of Storage Proteins in Grasses. Genome Biol Evol. 2016;8:1712-21 pubmed publisher
    ..indolines that determine kernel softness are present in teff and the panicoid cereal called foxtail millet (Setaria italica) but not in sorghum or maize, indicating that these genes were only recently lost in some members of the ..
  62. Travaini M, Sosa G, Ceccarelli E, Walter H, Cantrell C, Carrillo N, et al. Khellin and Visnagin, Furanochromones from Ammi visnaga (L.) Lam., as Potential Bioherbicides. J Agric Food Chem. 2016;64:9475-9487 pubmed publisher
    ..Lolium multiflorum), barnyardgrass (Echinocloa crus-galli), crabgrass (Digitaria sanguinalis), foxtail (Setaria italica), and millet (Panicum sp.)] and two broadleaf species [morningglory (Ipomea sp...
  63. Ni X, Xia Q, Zhang H, Cheng S, Li H, Fan G, et al. Updated foxtail millet genome assembly and gene mapping of nine key agronomic traits by resequencing a RIL population. Gigascience. 2017;6:1-8 pubmed publisher
    Foxtail millet (Setaria italica) provides food and fodder in semi-arid regions and infertile land. Resequencing of 184 foxtail millet recombinant inbred lines (RILs) was carried out to aid essential research on foxtail millet improvement...
  64. Lu S, Li B, Zhai H, Zhang X, Zhang Z. An effective approach to quantitative analysis of ternary amino acids in foxtail millet substrate based on terahertz spectroscopy. Food Chem. 2018;246:220-227 pubmed publisher
    ..approach to quantitative analysis was proposed, and applied on the determination of the ternary amino acids in foxtail millet substrate...
  65. Tang S, Li L, Wang Y, Chen Q, Zhang W, Jia G, et al. Genotype-specific physiological and transcriptomic responses to drought stress in Setaria italica (an emerging model for Panicoideae grasses). Sci Rep. 2017;7:10009 pubmed publisher
    ..b>Setaria italica, which is extremely drought-tolerant, has been regarded as a model plant for studying stress biology...
  66. Ren T, Wang J, Zhao M, Gong X, Wang S, Wang G, et al. Involvement of NAC transcription factor SiNAC1 in a positive feedback loop via ABA biosynthesis and leaf senescence in foxtail millet. Planta. 2018;247:53-68 pubmed publisher
    ..Foxtail millet (Setaria italica L...
  67. Hodge J, Kellogg E. Abscission zone development in Setaria viridis and its domesticated relative, Setaria italica. Am J Bot. 2016;103:998-1005 pubmed publisher
    ..In particular, no set of small, densely cytoplasmic cells is obvious. This difference in anatomy could point to differential genetic control of the structure. ..
  68. Cordon G, Lagorio M, Paruelo J. Chlorophyll fluorescence, photochemical reflective index and normalized difference vegetative index during plant senescence. J Plant Physiol. 2016;199:100-110 pubmed publisher
    ..at canopy level in grass species presenting different photosynthetic metabolism: Avena sativa (C3) and Setaria italica (C4), at different stages of the natural senescence process...
  69. Ramakrishnan M, Antony Ceasar S, Duraipandiyan V, Vinod K, Kalpana K, Al Dhabi N, et al. Tracing QTLs for Leaf Blast Resistance and Agronomic Performance of Finger Millet (Eleusine coracana (L.) Gaertn.) Genotypes through Association Mapping and in silico Comparative Genomics Analyses. PLoS ONE. 2016;11:e0159264 pubmed publisher
    ..revealed that 12 candidate genes were associated with 8 QTLs in the genomes of grass species such as rice, foxtail millet, maize, Brachypodium stacei, B. distachyon, Panicum hallii and switchgrass...
  70. Tian B, Qiao Z, Zhang L, Li H, Pei Y. Hydrogen sulfide and proline cooperate to alleviate cadmium stress in foxtail millet seedlings. Plant Physiol Biochem. 2016;109:293-299 pubmed publisher
    ..These results suggest that H2S and proline cooperate to alleviate Cd-damage in foxtail millet.
  71. Tsang C, Li K, Hsu T, Tsai Y, Fang P, Hsing Y. Broomcorn and foxtail millet were cultivated in Taiwan about 5000 years ago. Bot Stud. 2017;58:3 pubmed publisher
    ..Two domesticated millet, including broomcorn millet (Panicum miliaceum) and foxtail millet (Setaria italica), as well as one wild millet species, yellow foxtail (Setaria glauca), were identified in the unearthed seeds...
  72. Hittalmani S, Mahesh H, Shirke M, Biradar H, Uday G, Aruna Y, et al. Genome and Transcriptome sequence of Finger millet (Eleusine coracana (L.) Gaertn.) provides insights into drought tolerance and nutraceutical properties. BMC Genomics. 2017;18:465 pubmed publisher
    ..The finger millet genome was found to have higher colinearity with foxtail millet and rice as compared to other Poaceae species...
  73. Mei W, Boatwright L, Feng G, Schnable J, Barbazuk W. Evolutionarily Conserved Alternative Splicing Across Monocots. Genetics. 2017;207:465-480 pubmed publisher
    ..data across nine plant species, including five grass monocots (maize, sorghum, rice, Brachpodium, and foxtail millet), plus two nongrass monocots (banana and African oil palm), the eudicot Arabidopsis, and the basal ..
  74. Liu N, Xie K, Jia Q, Zhao J, Chen T, Li H, et al. Foxtail Mosaic Virus-Induced Gene Silencing in Monocot Plants. Plant Physiol. 2016;171:1801-7 pubmed publisher
    ..wheat (Triticum aestivum) and foxtail millet (Setaria italica)...
  75. Dey A, Sit N. Modification of foxtail millet starch by combining physical, chemical and enzymatic methods. Int J Biol Macromol. 2017;95:314-320 pubmed publisher
    Modification of foxtail millet starch was carried out by heat moisture treatment (HT), acid hydrolysis (AH), enzymatic treatment (EH), Ultrasound treatment (UT) and their combinations...
  76. Zhang L, Liu B, Zheng G, Zhang A, Li R. Genome-wide characterization of the SiDof gene family in foxtail millet (Setaria italica). Biosystems. 2017;151:27-33 pubmed publisher
    ..Overall, this study could provide novel information on SiDofs for further investigation in foxtail millet.
  77. Sharma S, Saxena D, Riar C. Changes in the GABA and polyphenols contents of foxtail millet on germination and their relationship with in vitro antioxidant activity. Food Chem. 2018;245:863-870 pubmed publisher
    ..the characteristics of polyphenolic components profile, GABA contents and in vitro antioxidant capacity of the foxtail millet flour extracts. The total antioxidant activity (29.0-45.23?mgAAE/g) and reducing power (0.53-0...
  78. Lu S, Zhang X, Zhang Z, Yang Y, Xiang Y. Quantitative measurements of binary amino acids mixtures in yellow foxtail millet by terahertz time domain spectroscopy. Food Chem. 2016;211:494-501 pubmed publisher
    ..The binary mixtures of amino acids were prepared with yellow foxtail millet matrix, substituted for polyethylene (PE) as previously reported...
  79. Liu J, Xu Z, Lu P, Li W, Chen M, Guo C, et al. Genome-wide investigation and expression analyses of the pentatricopeptide repeat protein gene family in foxtail millet. BMC Genomics. 2016;17:840 pubmed
    ..patens, the lycophyte Selaginella moellendorffii, the eudicot Arabidopsis, and the monocots rice and foxtail millet. It appears that the expansion of this gene family prior to the divergence of the euphyllophytes and the ..
  80. Tian B, Zhang Y, Jin Z, Liu Z, Pei Y. Role of hydrogen sulfide in the methyl jasmonate response to cadmium stress in foxtail millet. Front Biosci (Landmark Ed). 2017;22:530-538 pubmed
    ..Treating foxtail millet with 1 microM MeJA not only enhanced Cd tolerance and alleviated growth inhibitions but also decreased the ..
  81. Liu K, Qi S, Li D, Jin C, Gao C, Duan S, et al. TRANSPARENT TESTA GLABRA 1 ubiquitously regulates plant growth and development from Arabidopsis to foxtail millet (Setaria italica). Plant Sci. 2017;254:60-69 pubmed publisher
    ..In the present study, to determine whether SiTTG1 of the phylogenetically distant monocot foxtail millet (Setaria italica) has similar functions, we used transgenic Arabidopsis and Nicotiana systems to explore its activities...
  82. Wang M, Ellsworth P, Zhou J, Cousins A, Sankaran S. Evaluation of water-use efficiency in foxtail millet (Setaria italica) using visible-near infrared and thermal spectral sensing techniques. Talanta. 2016;152:531-9 pubmed publisher
    ..imaging and visual-near infrared spectroscopy for assessing water-use efficiency (WUE) in foxtail millet (Setaria italica (L.) P. Beauv) was evaluated. The visible-near infrared spectral reflectance (350-2500 nm) and thermal (7...
  83. Chen J, Duan W, Ren X, Wang C, Pan Z, Diao X, et al. Effect of foxtail millet protein hydrolysates on lowering blood pressure in spontaneously hypertensive rats. Eur J Nutr. 2017;56:2129-2138 pubmed publisher
    The objective of this study was to determine the effect of foxtail millet protein hydrolysates on lowering blood pressure in spontaneously hypertensive rats (SHRs)...
  84. Pandey G, Yadav C, Sahu P, Muthamilarasan M, Prasad M. Salinity induced differential methylation patterns in contrasting cultivars of foxtail millet (Setaria italica L.). Plant Cell Rep. 2017;36:759-772 pubmed publisher
    ..Foxtail millet (Setaria italica) is known for its better tolerance to abiotic stresses compared to other cereal crops...
  85. Yuan X, Zhang L, Huang L, Yang H, Zhong Y, Ning N, et al. Spraying Brassinolide improves Sigma Broad tolerance in foxtail millet (Setaria italica L.) through modulation of antioxidant activity and photosynthetic capacity. Sci Rep. 2017;7:11232 pubmed publisher
    To explore the role of Brassinolide (BR) in improving the tolerance of Sigma Broad in foxtail millet (Setaria italica L.), effects of 0.1 mg/L of BR foliar application 24 h before 3...
  86. Jin T, Wang Y, Huang Y, Xu J, Zhang P, Wang N, et al. Taxonomic structure and functional association of foxtail millet root microbiome. Gigascience. 2017;6:1-12 pubmed publisher
    ..This work investigates the root bacterial community of foxtail millet (Setaria italica) and its potential effects on host plant productivity...
  87. Kobayashi M, Hiraka Y, Abe A, Yaegashi H, Natsume S, Kikuchi H, et al. Genome analysis of the foxtail millet pathogen Sclerospora graminicola reveals the complex effector repertoire of graminicolous downy mildews. BMC Genomics. 2017;18:897 pubmed publisher
    ..Sclerospora graminicola, is an economically important disease of Gramineae crops including foxtail millet (Setaria italica). Plants infected with S...
  88. Dong P, Tu X, Chu P, Lü P, Zhu N, Grierson D, et al. 3D Chromatin Architecture of Large Plant Genomes Determined by Local A/B Compartments. Mol Plant. 2017;10:1497-1509 pubmed publisher
    ..DNA methylation, histone modifications, accessible chromatin, and gene expression, of maize, tomato, sorghum, foxtail millet, and rice with genome sizes ranging from 0.4 to 2.4 Gb...
  89. Worthington M, Heffelfinger C, Bernal D, Quintero C, Zapata Y, Perez J, et al. A Parthenogenesis Gene Candidate and Evidence for Segmental Allopolyploidy in Apomictic Brachiaria decumbens. Genetics. 2016;203:1117-32 pubmed publisher
    ..High-resolution molecular karyotyping and comparative genomics with Setaria italica (L.) P. Beauv provided conclusive evidence for segmental allopolyploidy in B...
  90. Ceasar S, Baker A, Ignacimuthu S. Functional characterization of the PHT1 family transporters of foxtail millet with development of a novel Agrobacterium-mediated transformation procedure. Sci Rep. 2017;7:14064 pubmed publisher
    ..Foxtail millet (Setaria italica) is an orphan crop essential to the food security of many small farmers in Asia and Africa and is a model ..
  91. Délye C, Wang T, Darmency H. An isoleucine-leucine substitution in chloroplastic acetyl-CoA carboxylase from green foxtail (Setaria viridis L. Beauv.) is responsible for resistance to the cyclohexanedione herbicide sethoxydim. Planta. 2002;214:421-7 pubmed
    ..Beauv.) resistant or sensitive to sethoxydim, and from one sethoxydim-sensitive line of Setaria italica (L. Beauv.) were cloned and sequenced...
  92. Sreenivasulu N, Miranda M, Prakash H, Wobus U, Weschke W. Transcriptome changes in foxtail millet genotypes at high salinity: identification and characterization of a PHGPX gene specifically upregulated by NaCl in a salt-tolerant line. J Plant Physiol. 2004;161:467-77 pubmed
    ..Prasad) and sensitive (cv. Lepakshi) seedlings of foxtail millet (Setaria italica L.)...