tomato

Summary

Alias: Lycopersicon esculentum, Solanum lycopersicum, Lycopersicon lycopersicum, Lycopersicum esculentum, Solanum lycopersicon, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L.

Top Publications

  1. Hu G, deHart A, Li Y, Ustach C, Handley V, Navarre R, et al. EDS1 in tomato is required for resistance mediated by TIR-class R genes and the receptor-like R gene Ve. Plant J. 2005;42:376-91 pubmed
    ..Here, we report the use of N-transgenic tomato to identify a fast-neutron mutant, sun1-1 (suppressor of N), that is defective in N-mediated resistance...
  2. Bar M, Sharfman M, Ron M, Avni A. BAK1 is required for the attenuation of ethylene-inducing xylanase (Eix)-induced defense responses by the decoy receptor LeEix1. Plant J. 2010;63:791-800 pubmed publisher
    ..potent elicitor of plant defense responses in specific cultivars of tobacco (Nicotiana tabacum) and tomato (Solanum lycopersicum)...
  3. van Ooijen G, Mayr G, Albrecht M, Cornelissen B, Takken F. Transcomplementation, but not physical association of the CC-NB-ARC and LRR domains of tomato R protein Mi-1.2 is altered by mutations in the ARC2 subdomain. Mol Plant. 2008;1:401-10 pubmed publisher
    ..We analyzed the intramolecular interaction of the LRR domain of tomato R protein Mi-1.2 with its N-terminus...
  4. Gálvez F, Baghour M, Hao G, Cagnac O, Rodriguez Rosales M, Venema K. Expression of LeNHX isoforms in response to salt stress in salt sensitive and salt tolerant tomato species. Plant Physiol Biochem. 2012;51:109-15 pubmed publisher
    ..this hypothesis, we studied the expression level of four NHX genes in the salt sensitive cultivated species Solanum lycopersicum L. cv...
  5. McDowell E, Kapteyn J, Schmidt A, Li C, Kang J, Descour A, et al. Comparative functional genomic analysis of Solanum glandular trichome types. Plant Physiol. 2011;155:524-39 pubmed publisher
    ..differences between different glandular trichome types in several domesticated and wild Solanum species: Solanum lycopersicum (glandular trichome types 1, 6, and 7), Solanum habrochaites (types 1, 4, and 6), Solanum pennellii (types ..
  6. Leide J, Hildebrandt U, Reussing K, Riederer M, Vogg G. The developmental pattern of tomato fruit wax accumulation and its impact on cuticular transpiration barrier properties: effects of a deficiency in a beta-ketoacyl-coenzyme A synthase (LeCER6). Plant Physiol. 2007;144:1667-79 pubmed
    ..The astomatous fruits of the tomato (Lycopersicon esculentum) 'MicroTom' and its lecer6 mutant, defective in a beta-ketoacyl-coenzyme A synthase, which is involved in ..
  7. Zeng L, Velásquez A, Munkvold K, Zhang J, Martin G. A tomato LysM receptor-like kinase promotes immunity and its kinase activity is inhibited by AvrPtoB. Plant J. 2012;69:92-103 pubmed publisher
    Resistance in tomato (Solanum lycopersicum) to infection by Pseudomonas syringae involves both detection of pathogen-associated molecular patterns (PAMPs) and recognition by the host Pto kinase of pathogen effector AvrPtoB which is ..
  8. Vrebalov J, Pan I, Arroyo A, McQuinn R, Chung M, Poole M, et al. Fleshy fruit expansion and ripening are regulated by the Tomato SHATTERPROOF gene TAGL1. Plant Cell. 2009;21:3041-62 pubmed publisher
    ..Through RNA interference repression, we show that Tomato AGAMOUS-LIKE1 (TAGL1), the tomato (Solanum lycopersicum) ortholog of the duplicated SHATTERPROOF (SHP) MADS box genes of Arabidopsis thaliana, is necessary for ..
  9. Bienert G, Bienert M, Jahn T, Boutry M, Chaumont F. Solanaceae XIPs are plasma membrane aquaporins that facilitate the transport of many uncharged substrates. Plant J. 2011;66:306-17 pubmed publisher
    ..XIP cDNA and gDNA were cloned from tobacco, potato, tomato, and morning glory...

More Information

Publications175 found, 100 shown here

  1. Sun L, Yuan B, Zhang M, Wang L, Cui M, Wang Q, et al. Fruit-specific RNAi-mediated suppression of SlNCED1 increases both lycopene and ?-carotene contents in tomato fruit. J Exp Bot. 2012;63:3097-108 pubmed publisher
    Abscisic acid (ABA) plays important roles during tomato fruit ripening...
  2. Olias R, Eljakaoui Z, Li J, De Morales P, Marín Manzano M, Pardo J, et al. The plasma membrane Na+/H+ antiporter SOS1 is essential for salt tolerance in tomato and affects the partitioning of Na+ between plant organs. Plant Cell Environ. 2009;32:904-16 pubmed publisher
    We have identified a plasma membrane Na(+)/H(+) antiporter gene from tomato (Solanum lycopersicum), SlSOS1, and used heterologous expression in yeast to confirm that SlSOS1 was the functional homolog of AtSOS1...
  3. Karlova R, Rosin F, Busscher Lange J, Parapunova V, Do P, Fernie A, et al. Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening. Plant Cell. 2011;23:923-41 pubmed publisher
    Fruit ripening in tomato (Solanum lycopersicum) requires the coordination of both developmental cues as well as the plant hormone ethylene...
  4. Fradin E, Zhang Z, Juarez Ayala J, Castroverde C, Nazar R, Robb J, et al. Genetic dissection of Verticillium wilt resistance mediated by tomato Ve1. Plant Physiol. 2009;150:320-32 pubmed publisher
    ..dahliae and V. albo-atrum has been cloned from tomato (Solanum lycopersicum) only...
  5. Dominguez P, Frankel N, Mazuch J, Balbo I, Iusem N, Fernie A, et al. ASR1 mediates glucose-hormone cross talk by affecting sugar trafficking in tobacco plants. Plant Physiol. 2013;161:1486-500 pubmed publisher
    ..It thus can be postulated that ASR is not only involved in the control of hexose uptake in heterotrophic organs, as we have previously reported, but also in the control of carbon fixation by the leaves mediated by a similar mechanism. ..
  6. Gonzalez N, Hernould M, Delmas F, G vaudant F, Duffe P, Causse M, et al. Molecular characterization of a WEE1 gene homologue in tomato (Lycopersicon esculentum Mill.). Plant Mol Biol. 2004;56:849-61 pubmed publisher
    Early fruit development in tomato (Lycopersicon esculentum Mill.) proceeds in two distinct phases of growth that comprise cell division and cell expansion, respectively...
  7. Robatzek S, Bittel P, Chinchilla D, Köchner P, Felix G, Shiu S, et al. Molecular identification and characterization of the tomato flagellin receptor LeFLS2, an orthologue of Arabidopsis FLS2 exhibiting characteristically different perception specificities. Plant Mol Biol. 2007;64:539-47 pubmed
    ..version of the same epitope derived from Escherichia coli, flg15(E coli), is highly active as an elicitor in tomato but not in A. thaliana or Nicotiana benthamiana...
  8. Falara V, Akhtar T, Nguyen T, Spyropoulou E, Bleeker P, Schauvinhold I, et al. The tomato terpene synthase gene family. Plant Physiol. 2011;157:770-89 pubmed publisher
    ..We show here that the genome of cultivated tomato (Solanum lycopersicum) contains 44 terpene synthase (TPS) genes, including 29 that are functional or potentially functional...
  9. Souer E, Rebocho A, Bliek M, Kusters E, de Bruin R, Koes R. Patterning of inflorescences and flowers by the F-Box protein DOUBLE TOP and the LEAFY homolog ABERRANT LEAF AND FLOWER of petunia. Plant Cell. 2008;20:2033-48 pubmed publisher
    ..Mutation of DOT or its tomato (Solanum lycopersicum) homolog ANANTHA abolishes FMI...
  10. Zhang M, Yuan B, Leng P. The role of ABA in triggering ethylene biosynthesis and ripening of tomato fruit. J Exp Bot. 2009;60:1579-88 pubmed publisher
    In order to understand more details about the role of abscisic acid (ABA) in fruit ripening and senescence of tomato, two cDNAs (LeNCED1 and LeNCED2) which encode 9-cis-epoxycarotenoid dioxygenase (NCED) as a key enzyme in ABA ..
  11. Melech Bonfil S, Sessa G. The SlMKK2 and SlMPK2 genes play a role in tomato disease resistance to Xanthomonas campestris pv. vesicatoria. Plant Signal Behav. 2011;6:154-6 pubmed
    Xanthomonas campestris pv. vesicatoria (Xcv) is the causal agent of bacterial spot disease in tomato (Solanum lycopersicum) plants...
  12. Hendelman A, Kravchik M, Stav R, Zik M, Lugassi N, Arazi T. The developmental outcomes of P0-mediated ARGONAUTE destabilization in tomato. Planta. 2013;237:363-77 pubmed publisher
    ..b>Tomato encodes two AGO1 homologs (SlAGO1s), but mutants have not been described to date...
  13. Liu K, Shen L, Wang J, Sheng J. Rapid inactivation of chloroplastic ascorbate peroxidase is responsible for oxidative modification to Rubisco in tomato (Lycopersicon esculentum) under cadmium stress. J Integr Plant Biol. 2008;50:415-26 pubmed publisher
    ..11.1.11) isoenzymes and changes of enzymes activities under cadmium stress were investigated in tomato seedlings. Two APX isoforms, one thylakoid-bound and one stromal, were detected...
  14. Chan Schaminet K, Baniwal S, Bublak D, Nover L, Scharf K. Specific interaction between tomato HsfA1 and HsfA2 creates hetero-oligomeric superactivator complexes for synergistic activation of heat stress gene expression. J Biol Chem. 2009;284:20848-57 pubmed publisher
    ..In response to hs, accumulation of both heat stress proteins (Hsp) and Hsfs is induced. In tomato, the physical interaction between the constitutively expressed HsfA1 and the hs-inducible HsfA2 results in ..
  15. Paetzold H, Garms S, Bartram S, Wieczorek J, Urós Gracia E, Rodríguez Concepción M, et al. The isogene 1-deoxy-D-xylulose 5-phosphate synthase 2 controls isoprenoid profiles, precursor pathway allocation, and density of tomato trichomes. Mol Plant. 2010;3:904-16 pubmed publisher
    ..In tomato (Solanum lycopersicum), the SlDXS1 gene is ubiquitously expressed with highest levels during fruit ripening, whereas SlDXS2 ..
  16. Kong F, Wang J, Cheng L, Liu S, Wu J, Peng Z, et al. Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. Gene. 2012;499:108-20 pubmed publisher
    ..In this study, we investigated 16 putative SlMAPK genes from tomato genome and compared them with those from Arabidopsis...
  17. Sulpice R, Sienkiewicz Porzucek A, Osorio S, Krahnert I, Stitt M, Fernie A, et al. Mild reductions in cytosolic NADP-dependent isocitrate dehydrogenase activity result in lower amino acid contents and pigmentation without impacting growth. Amino Acids. 2010;39:1055-66 pubmed publisher
    Transgenic tomato (Solanum lycopersicum) plants were generated targeting the cytosolic NADP-dependent isocitrate dehydrogenase gene (SlICDH1) via the RNA interference approach...
  18. Fradin E, Abd El Haliem A, Masini L, van den Berg G, Joosten M, Thomma B. Interfamily transfer of tomato Ve1 mediates Verticillium resistance in Arabidopsis. Plant Physiol. 2011;156:2255-65 pubmed publisher
    ..Therefore, genetic resistance is the preferred method for disease control. Only from tomato (Solanum lycopersicum) has a Verticillium resistance locus been cloned, comprising the Ve1 gene that encodes a receptor-like ..
  19. Martel C, Vrebalov J, Tafelmeyer P, Giovannoni J. The tomato MADS-box transcription factor RIPENING INHIBITOR interacts with promoters involved in numerous ripening processes in a COLORLESS NONRIPENING-dependent manner. Plant Physiol. 2011;157:1568-79 pubmed publisher
    ..The MADS-box transcription factor RIPENING INHIBITOR (RIN) is an essential regulator of tomato (Solanum lycopersicum) fruit ripening but the exact mechanism by which it influences the expression of ripening-related genes ..
  20. Lieberman M, Segev O, Gilboa N, Lalazar A, Levin I. The tomato homolog of the gene encoding UV-damaged DNA binding protein 1 (DDB1) underlined as the gene that causes the high pigment-1 mutant phenotype. Theor Appl Genet. 2004;108:1574-81 pubmed
    A tomato EST sequence, highly homologous to the human and Arabidopsis thaliana UV-damaged DNA binding protein 1 (DDB1), was mapped to the centromeric region of the tomato chromosome 2...
  21. Nakano T, Kimbara J, Fujisawa M, Kitagawa M, Ihashi N, Maeda H, et al. MACROCALYX and JOINTLESS interact in the transcriptional regulation of tomato fruit abscission zone development. Plant Physiol. 2012;158:439-50 pubmed publisher
    ..Here, we describe a novel transcription factor regulating the development of tomato (Solanum lycopersicum) pedicel AZs...
  22. Fujisawa M, Shima Y, Higuchi N, Nakano T, Koyama Y, Kasumi T, et al. Direct targets of the tomato-ripening regulator RIN identified by transcriptome and chromatin immunoprecipitation analyses. Planta. 2012;235:1107-22 pubmed publisher
    ..In tomato (Solanum lycopersicum), a typical climacteric fruit, the MADS-box transcription factor RIN is one of the earliest-acting ripening ..
  23. Pattison R, Catalá C. Evaluating auxin distribution in tomato (Solanum lycopersicum) through an analysis of the PIN and AUX/LAX gene families. Plant J. 2012;70:585-98 pubmed publisher
    ..To address these issues, we have investigated the spatiotemporal distribution of auxin during tomato (Solanum lycopersicum) fruit development and the function of the PIN and AUX/LAX gene families...
  24. Ament K, Van Schie C, Bouwmeester H, Haring M, Schuurink R. Induction of a leaf specific geranylgeranyl pyrophosphate synthase and emission of (E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene in tomato are dependent on both jasmonic acid and salicylic acid signaling pathways. Planta. 2006;224:1197-208 pubmed
    Two cDNAs encoding geranylgeranyl pyrophosphate (GGPP) synthases from tomato (Lycopersicon esculentum) have been cloned and functionally expressed in Escherichia coli...
  25. Galpaz N, Wang Q, Menda N, Zamir D, Hirschberg J. Abscisic acid deficiency in the tomato mutant high-pigment 3 leading to increased plastid number and higher fruit lycopene content. Plant J. 2008;53:717-30 pubmed
    ..To study the regulation of carotenoid biosynthesis, we have isolated novel mutations in tomato (Solanum lycopersicum) with altered pigmentation of fruit or flowers...
  26. Chang A, Lim M, Lee S, Robb E, Nazar R. Tomato phenylalanine ammonia-lyase gene family, highly redundant but strongly underutilized. J Biol Chem. 2008;283:33591-601 pubmed publisher
    ..In this study, Southern blot and dot blot analyses in tomato indicate a surprisingly large family of related sequences with approximately 26 copies in the diploid genome, some ..
  27. Molesini B, Pandolfini T, Rotino G, Dani V, Spena A. Aucsia gene silencing causes parthenocarpic fruit development in tomato. Plant Physiol. 2009;149:534-48 pubmed publisher
    ..The expression of auxin biosynthesis genes in ovules and placenta results in uncoupling of tomato (Solanum lycopersicum) fruit development from fertilization with production of parthenocarpic fruits...
  28. Mantelin S, Peng H, Li B, Atamian H, Takken F, Kaloshian I. The receptor-like kinase SlSERK1 is required for Mi-1-mediated resistance to potato aphids in tomato. Plant J. 2011;67:459-71 pubmed publisher
    ..To assess the role of SERK1 in Mi-1-mediated resistance, Solanum lycopersicum (tomato) SlSERK genes were cloned...
  29. Audran Delalande C, Bassa C, Mila I, Regad F, Zouine M, Bouzayen M. Genome-wide identification, functional analysis and expression profiling of the Aux/IAA gene family in tomato. Plant Cell Physiol. 2012;53:659-72 pubmed publisher
    ..In this study, we identified and comprehensively analyzed the entire Aux/IAA gene family in tomato (Solanum lycopersicum), a reference species for Solanaceae plants, and the model plant for fleshy fruit development...
  30. Akhtar T, Matsuba Y, Schauvinhold I, Yu G, Lees H, Klein S, et al. The tomato cis-prenyltransferase gene family. Plant J. 2013;73:640-52 pubmed publisher
    ..Recently, we identified a short-chain CPT, neryl diphosphate synthase (NDPS1), in tomato (Solanum lycopersicum)...
  31. Huang Z, Van Houten J, Gonzalez G, Xiao H, van der Knaap E. Genome-wide identification, phylogeny and expression analysis of SUN, OFP and YABBY gene family in tomato. Mol Genet Genomics. 2013;288:111-29 pubmed publisher
    ..The tomato fruit shape genes SUN, OVATE, and FASCIATED belong to IQD/SUN, OFP and the YABBY gene family, respectively...
  32. Dong T, Chen G, Tian S, Xie Q, Yin W, Zhang Y, et al. A non-climacteric fruit gene CaMADS-RIN regulates fruit ripening and ethylene biosynthesis in climacteric fruit. PLoS ONE. 2014;9:e95559 pubmed publisher
    ..of CaMADS-RIN, an overexpressed construct was created and transformed into ripening inhibitor (rin) mutant tomato plants. Broad ripening phenotypes were observed in CaMADS-RIN overexpressed rin fruits...
  33. Wang A, Li J, Zhang B, Xu X, Bewley J. Expression and location of endo-beta-mannanase during the ripening of tomato fruit, and the relationship between its activity and softening. J Plant Physiol. 2009;166:1672-84 pubmed publisher
    Endo-beta-mannanase is thought to play a role in tomato fruit ripening by participating in the degradation of cell walls...
  34. K ck M, Gross N, Stenzel I, Hause G. Phloem-specific expression of the wound-inducible ribonuclease LE from tomato (Lycopersicon esculentum cv. Lukullus). Planta. 2004;219:233-42 pubmed publisher
    Ribonuclease LE (RNaseLE) from tomato (Lycopersicon esculentum Mill. cv. Lukullus) belongs to the widespread RNase T2 family of ribonucleases...
  35. Wang H, Jones B, Li Z, Frasse P, Delalande C, Regad F, et al. The tomato Aux/IAA transcription factor IAA9 is involved in fruit development and leaf morphogenesis. Plant Cell. 2005;17:2676-92 pubmed
    ..We report here that the downregulation of IAA9, a tomato (Solanum lycopersicum) gene from a distinct subfamily of Aux/IAA genes, results in a pleiotropic phenotype, consistent with its ..
  36. Hovav R, Chehanovsky N, Moy M, Jetter R, Schaffer A. The identification of a gene (Cwp1), silenced during Solanum evolution, which causes cuticle microfissuring and dehydration when expressed in tomato fruit. Plant J. 2007;52:627-39 pubmed
    ..expressed only in the primitive green-fruited wild tomato species, but is not expressed in the cultivated Solanum lycopersicum and the closely related Solanum cheesmaniae and Solanum pimpinellifolium, indicating a pre-adaptive role ..
  37. Montgomery T, Howell M, Cuperus J, Li D, Hansen J, Alexander A, et al. Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation. Cell. 2008;133:128-41 pubmed publisher
    ..miR390 and AGO7, therefore, evolved as a highly specific miRNA guide/effector protein pair to function at two distinct tasiRNA biogenesis steps. ..
  38. Shkolnik D, Bar Zvi D. Tomato ASR1 abrogates the response to abscisic acid and glucose in Arabidopsis by competing with ABI4 for DNA binding. Plant Biotechnol J. 2008;6:368-78 pubmed publisher
    ..Arabidopsis was transformed with cDNA encoding tomato abscisic acid stress ripening 1 (ASR1), a sequence-specific DNA protein that has no orthologues in the Arabidopsis ..
  39. Melech Bonfil S, Sessa G. Tomato MAPKKK? is a positive regulator of cell-death signaling networks associated with plant immunity. Plant J. 2010;64:379-91 pubmed
    ..Here, we identified MAPKKK gene of tomato (Solanum lycopersicum), SIMAPKKK?, which is required for hypersensitive response cell death and disease resistance against Gram-..
  40. Mariutto M, Duby F, Adam A, Bureau C, Fauconnier M, Ongena M, et al. The elicitation of a systemic resistance by Pseudomonas putida BTP1 in tomato involves the stimulation of two lipoxygenase isoforms. BMC Plant Biol. 2011;11:29 pubmed publisher
    ..PAL) and lipoxygenase (LOX), key enzymes of the phenylpropanoid and oxylipin pathways respectively, in tomato treated or not with P. putida BTP1...
  41. Qin G, Wang Y, Cao B, Wang W, Tian S. Unraveling the regulatory network of the MADS box transcription factor RIN in fruit ripening. Plant J. 2012;70:243-55 pubmed publisher
    ..representing 35 individual genes as potential targets of RIN by comparative proteomic analysis of a rin mutant in tomato fruits. Gene expression analysis showed that the mRNA level of 26 genes correlated well with the protein level...
  42. Shi J, Adato A, Alkan N, He Y, Lashbrooke J, Matas A, et al. The tomato SlSHINE3 transcription factor regulates fruit cuticle formation and epidermal patterning. New Phytol. 2013;197:468-80 pubmed publisher
    Fleshy tomato fruit typically lacks stomata; therefore, a proper cuticle is particularly vital for fruit development and interaction with the surroundings...
  43. Li C, Zhao J, Jiang H, Wu X, Sun J, Zhang C, et al. The wound response mutant suppressor of prosystemin-mediated responses6 (spr6) is a weak allele of the tomato homolog of CORONATINE-INSENSITIVE1 (COI1). Plant Cell Physiol. 2006;47:653-63 pubmed
    The systemic defense response of tomato plant in response to insect attack and wounding is regulated by the 18 amino acid peptide systemin and the phytohormone jasmonic acid (JA)...
  44. van Schie C, Haring M, Schuurink R. Tomato linalool synthase is induced in trichomes by jasmonic acid. Plant Mol Biol. 2007;64:251-63 pubmed
    Tomato (Lycopersicon esculentum) plants emit a blend of volatile organic compounds, which mainly consists of terpenes. Upon herbivory or wounding, the emission of several terpenes increases...
  45. Ek Ramos M, Avila J, Cheng C, Martin G, Devarenne T. The T-loop extension of the tomato protein kinase AvrPto-dependent Pto-interacting protein 3 (Adi3) directs nuclear localization for suppression of plant cell death. J Biol Chem. 2010;285:17584-94 pubmed publisher
    In tomato (Solanum lycopersicum), resistance to Pseudomonas syringae pv...
  46. Cheng W, Munkvold K, Gao H, Mathieu J, Schwizer S, Wang S, et al. Structural analysis of Pseudomonas syringae AvrPtoB bound to host BAK1 reveals two similar kinase-interacting domains in a type III Effector. Cell Host Microbe. 2011;10:616-26 pubmed publisher
    To infect plants, Pseudomonas syringae pv. tomato delivers ~30 type III effector proteins into host cells, many of which interfere with PAMP-triggered immunity (PTI)...
  47. Tanksley S. The genetic, developmental, and molecular bases of fruit size and shape variation in tomato. Plant Cell. 2004;16 Suppl:S181-9 pubmed
  48. Serrani J, Ruiz Rivero O, Fos M, García Martínez J. Auxin-induced fruit-set in tomato is mediated in part by gibberellins. Plant J. 2008;56:922-34 pubmed publisher
    Tomato (Solanum lycopersicum L.) fruit-set and growth depend on gibberellins (GAs). Auxins, another kind of hormone, can also induce parthenocarpic fruit growth in tomato, although their possible interaction with GAs is unknown...
  49. Oh K, Ivanchenko M, White T, Lomax T. The diageotropica gene of tomato encodes a cyclophilin: a novel player in auxin signaling. Planta. 2006;224:133-44 pubmed
    The single gene, auxin-resistant diageotropica (dgt) mutant of tomato displays a pleiotropic auxin-related phenotype that includes a slow gravitropic response, lack of lateral roots, reduced apical dominance, altered vascular development, ..
  50. Gutierrez J, Balmuth A, Ntoukakis V, Mucyn T, Gimenez Ibanez S, Jones A, et al. Prf immune complexes of tomato are oligomeric and contain multiple Pto-like kinases that diversify effector recognition. Plant J. 2010;61:507-18 pubmed publisher
    ..In tomato, a protein complex containing the NB-LRR protein Prf and the protein kinase Pto confers recognition of the ..
  51. Piron F, Nicolaï M, Minoia S, Piednoir E, Moretti A, Salgues A, et al. An induced mutation in tomato eIF4E leads to immunity to two potyviruses. PLoS ONE. 2010;5:e11313 pubmed publisher
    ..investigate further the role of translation initiation factors in virus resistance we set up a TILLING platform in tomato, cloned genes encoding for translation initiation factors eIF4E and eIF4G and screened for induced mutations that ..
  52. Ren Z, Li Z, Miao Q, Yang Y, Deng W, Hao Y. The auxin receptor homologue in Solanum lycopersicum stimulates tomato fruit set and leaf morphogenesis. J Exp Bot. 2011;62:2815-26 pubmed publisher
    ..This gene, designated as Solanum lycopersicum TIR1 (SlTIR1), was found to be expressed in all the parts of floral buds and flowers at anthesis stages...
  53. Oh C, Martin G. Tomato 14-3-3 protein TFT7 interacts with a MAP kinase kinase to regulate immunity-associated programmed cell death mediated by diverse disease resistance proteins. J Biol Chem. 2011;286:14129-36 pubmed publisher
    ..In tomato, detection by the host Pto kinase of the Pseudomonas syringae proteins AvrPto or AvrPtoB causes localized PCD...
  54. Mart n Trillo M, Grand o E, Serra F, Marcel F, Rodr guez Buey M, Schmitz G, et al. Role of tomato BRANCHED1-like genes in the control of shoot branching. Plant J. 2011;67:701-14 pubmed publisher
    ..In tomato (Solanum lycopersicum, Solanaceae, Asteridae) we have identified two BRC1-like paralogues, SlBRC1a and SlBRC1b...
  55. Frankel N, Carrari F, Hasson E, Iusem N. Evolutionary history of the Asr gene family. Gene. 2006;378:74-83 pubmed publisher
    ..ASR proteins are localized in the nucleus and their likely function is transcriptional regulation. In cultivated tomato, we identified a novel fourth family member, named Asr4, which maps close to its sibling genes Asr1-Asr2-Asr3 and ..
  56. Huang S, Gao Y, Liu J, Peng X, Niu X, Fei Z, et al. Genome-wide analysis of WRKY transcription factors in Solanum lycopersicum. Mol Genet Genomics. 2012;287:495-513 pubmed publisher
    ..However, little information is available about the WRKYs in tomato (Solanum lycopersicum)...
  57. Azari R, Reuveni M, Evenor D, Nahon S, Shlomo H, Chen L, et al. Overexpression of UV-DAMAGED DNA BINDING PROTEIN 1 links plant development and phytonutrient accumulation in high pigment-1 tomato. J Exp Bot. 2010;61:3627-37 pubmed publisher
    Fruits of tomato plants carrying the high pigment-1 mutations hp-1 and hp-1(w) are characterized by an increased number of plastids coupled with enhanced levels of functional metabolites...
  58. de Jong M, Wolters Arts M, Garcia Martinez J, Mariani C, Vriezen W. The Solanum lycopersicum AUXIN RESPONSE FACTOR 7 (SlARF7) mediates cross-talk between auxin and gibberellin signalling during tomato fruit set and development. J Exp Bot. 2011;62:617-26 pubmed publisher
    Transgenic tomato plants (Solanum lycopersicum L...
  59. Chung M, Vrebalov J, Alba R, Lee J, McQuinn R, Chung J, et al. A tomato (Solanum lycopersicum) APETALA2/ERF gene, SlAP2a, is a negative regulator of fruit ripening. Plant J. 2010;64:936-47 pubmed publisher
    ..b>Tomato is a model for biology and genetics regulating specific ripening pathways including ethylene, carotenoids and cell ..
  60. Olimpieri I, Caccia R, Picarella M, Pucci A, Santangelo E, Soressi G, et al. Constitutive co-suppression of the GA 20-oxidase1 gene in tomato leads to severe defects in vegetative and reproductive development. Plant Sci. 2011;180:496-503 pubmed publisher
    To dissect the role of gibberellins in tomato development, we have constitutively down-regulated the gene GA 20-oxidase1 (GA20ox1)...
  61. Huang W, Miao M, Kud J, Niu X, Ouyang B, Zhang J, et al. SlNAC1, a stress-related transcription factor, is fine-tuned on both the transcriptional and the post-translational level. New Phytol. 2013;197:1214-24 pubmed publisher
    ..In this study, we determined the regulation of a stress-related tomato (Solanum lycopersicum) NAC1 (SlNAC1) transcription factor at both the transcriptional and the post-translational level...
  62. Spyropoulou E, Haring M, Schuurink R. Expression of Terpenoids 1, a glandular trichome-specific transcription factor from tomato that activates the terpene synthase 5 promoter. Plant Mol Biol. 2014;84:345-57 pubmed publisher
    ..In order to unravel the transcriptional regulation of the Solanum lycopersicum linalool synthase (SlMTS1, recently renamed SlTPS5) gene in glandular trichomes, we functionally dissected ..
  63. del Pozo O, Pedley K, Martin G. MAPKKKalpha is a positive regulator of cell death associated with both plant immunity and disease. EMBO J. 2004;23:3072-82 pubmed
    ..These results demonstrate that signal transduction pathways associated with both plant immunity and disease susceptibility share a common molecular switch. ..
  64. Nagy R, Karandashov V, Chague V, Kalinkevich K, Tamasloukht M, Xu G, et al. The characterization of novel mycorrhiza-specific phosphate transporters from Lycopersicon esculentum and Solanum tuberosum uncovers functional redundancy in symbiotic phosphate transport in solanaceous species. Plant J. 2005;42:236-50 pubmed publisher
    ..Here, we describe novel Pi transporters from the solanaceous species tomato, LePT4, and its orthologue StPT4 from potato, both being members of the Pht1 family of plant Pi transporters...
  65. Gonzalez N, Gévaudant F, Hernould M, Chevalier C, Mouras A. The cell cycle-associated protein kinase WEE1 regulates cell size in relation to endoreduplication in developing tomato fruit. Plant J. 2007;51:642-55 pubmed
    b>Tomato fruit size results from the combination of cell number and cell size which are respectively determined by cell division and cell expansion processes...
  66. Stigliani A, Giorio G, D Ambrosio C. Characterization of P450 carotenoid beta- and epsilon-hydroxylases of tomato and transcriptional regulation of xanthophyll biosynthesis in root, leaf, petal and fruit. Plant Cell Physiol. 2011;52:851-65 pubmed publisher
    ..Here we report on the isolation and functional characterization of tomato CYP97A29 and CYP97C11 genes encoding the P450 carotenoid ?- and ?-hydroxylases...
  67. Matsuo S, Kikuchi K, Fukuda M, Honda I, Imanishi S. Roles and regulation of cytokinins in tomato fruit development. J Exp Bot. 2012;63:5569-79 pubmed publisher
    ..study analysed CK concentrations and expression of genes involved in CK metabolism in developing tomato (Solanum lycopersicum) ovaries...
  68. Guyot R, Cheng X, Su Y, Cheng Z, Schlagenhauf E, Keller B, et al. Complex organization and evolution of the tomato pericentromeric region at the FER gene locus. Plant Physiol. 2005;138:1205-15 pubmed
    Tomato (Lycopersicon esculentum) is a model species for molecular biology research and a candidate for large-scale genome sequencing. Pericentromeric heterochromatin constitutes a large portion of the tomato chromosomes...
  69. Ballester A, Molthoff J, de Vos R, Hekkert B, Orzaez D, Fernández Moreno J, et al. Biochemical and molecular analysis of pink tomatoes: deregulated expression of the gene encoding transcription factor SlMYB12 leads to pink tomato fruit color. Plant Physiol. 2010;152:71-84 pubmed publisher
    ..Phenotypic analysis of an introgression line (IL) population derived from a cross between Solanum lycopersicum 'Moneyberg' and the wild species Solanum chmielewskii revealed three ILs with a pink fruit color...
  70. Stulemeijer I, Stratmann J, Joosten M. Tomato mitogen-activated protein kinases LeMPK1, LeMPK2, and LeMPK3 are activated during the Cf-4/Avr4-induced hypersensitive response and have distinct phosphorylation specificities. Plant Physiol. 2007;144:1481-94 pubmed
    Tomato (Solanum lycopersicum) plants with the Cf-4 resistance gene recognize strains of the pathogenic fungus Cladosporium fulvum that secrete the avirulence protein Avr4...
  71. Narváez Vásquez J, Orozco Cárdenas M, Ryan C. Systemic wound signaling in tomato leaves is cooperatively regulated by systemin and hydroxyproline-rich glycopeptide signals. Plant Mol Biol. 2007;65:711-8 pubmed
    Hydroxyproline-rich glycopeptides (HypSys peptides) have been isolated recently from tobacco and tomato leaves that are powerful activators of protease inhibitor synthesis...
  72. Bhattarai K, Atamian H, Kaloshian I, Eulgem T. WRKY72-type transcription factors contribute to basal immunity in tomato and Arabidopsis as well as gene-for-gene resistance mediated by the tomato R gene Mi-1. Plant J. 2010;63:229-40 pubmed publisher
    ..Using microarray analysis, we found that the paralogous tomato WRKY genes SlWRKY72a and b are transcriptionally up-regulated during disease resistance mediated by the R gene Mi-..
  73. Dong T, Hu Z, Deng L, Wang Y, Zhu M, Zhang J, et al. A tomato MADS-box transcription factor, SlMADS1, acts as a negative regulator of fruit ripening. Plant Physiol. 2013;163:1026-36 pubmed publisher
    ..In this study, a tomato (Solanum lycopersicum) MADS-box gene, SlMADS1, was cloned and its tissue-specific expression profile was analyzed...
  74. Zhu M, Chen G, Zhou S, Tu Y, Wang Y, Dong T, et al. A new tomato NAC (NAM/ATAF1/2/CUC2) transcription factor, SlNAC4, functions as a positive regulator of fruit ripening and carotenoid accumulation. Plant Cell Physiol. 2014;55:119-35 pubmed publisher
    Fruit ripening in tomato (Solanum lycopersicum) is a complicated development process affected by both endogenous hormonal and genetic regulators and external signals...
  75. Liu Y, Roof S, Ye Z, Barry C, van Tuinen A, Vrebalov J, et al. Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato. Proc Natl Acad Sci U S A. 2004;101:9897-902 pubmed
    ..Characterization of the tomato high-pigment mutations (hp1 and hp2) suggests the manipulation of light signal transduction machinery may be an ..
  76. Zhang J, Chen R, Xiao J, Qian C, Wang T, Li H, et al. A single-base deletion mutation in SlIAA9 gene causes tomato (Solanum lycopersicum) entire mutant. J Plant Res. 2007;120:671-8 pubmed
    The entire (e) locus of tomato (Solanum lycopersicum L.) controls leaf morphology. Dominant E and recessive e allele of the locus produce pinnate compound and complex reduced leaves...
  77. Giménez E, Pineda B, Capel J, Antón M, Atares A, Pérez Martín F, et al. Functional analysis of the Arlequin mutant corroborates the essential role of the Arlequin/TAGL1 gene during reproductive development of tomato. PLoS ONE. 2010;5:e14427 pubmed publisher
    ..Arlequin (Alq), a semi-dominant T-DNA tomato mutant showed developmental changes affecting flower and fruit ripening...
  78. Avila J, Devarenne T. Ubiquitination of the tomato cell death suppressor Adi3 by the RING E3 ubiquitin ligase AdBiL. Biochem Biophys Res Commun. 2013;430:119-24 pubmed publisher
    ..The tomato PCD suppressor Adi3 is an AGC kinase that shares functional homology with the mammalian inhibitor of apoptosis PKB...
  79. Ori N, Cohen A, Etzioni A, Brand A, Yanai O, Shleizer S, et al. Regulation of LANCEOLATE by miR319 is required for compound-leaf development in tomato. Nat Genet. 2007;39:787-91 pubmed
    ..In the classical, partially dominant mutation Lanceolate (La), the large compound leaves of tomato (Solanum lycopersicum) are converted into small simple ones...
  80. Zhong S, Lin Z, Grierson D. Tomato ethylene receptor-CTR interactions: visualization of NEVER-RIPE interactions with multiple CTRs at the endoplasmic reticulum. J Exp Bot. 2008;59:965-72 pubmed publisher
    ..These components of the ethylene signalling network found in Arabidopsis are conserved in the climacteric fruit tomato, but both the ethylene receptors and CTR1-like proteins (LeCTRs) in tomato are encoded by multigene families...
  81. Mucyn T, Wu A, Balmuth A, Arasteh J, Rathjen J. Regulation of tomato Prf by Pto-like protein kinases. Mol Plant Microbe Interact. 2009;22:391-401 pubmed publisher
    b>Tomato Prf encodes a nucleotide-binding domain shared by Apaf-1, certain R proteins, and CED-4 fused to C-terminal leucine-rich repeats (NBARC-LRR) protein that is required for bacterial immunity to Pseudomonas syringae and sensitivity to ..
  82. Aoki K, Yano K, Suzuki A, Kawamura S, Sakurai N, Suda K, et al. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. BMC Genomics. 2010;11:210 pubmed publisher
    The Solanaceae family includes several economically important vegetable crops. The tomato (Solanum lycopersicum) is regarded as a model plant of the Solanaceae family...
  83. Bastías A, López Climent M, Valcárcel M, Rosello S, Gomez Cadenas A, Casaretto J. Modulation of organic acids and sugar content in tomato fruits by an abscisic acid-regulated transcription factor. Physiol Plant. 2011;141:215-26 pubmed publisher
    ..mainly in seeds and in vegetative tissues under stress; however, they are also expressed in some fruits such as tomato. In order to get an insight into the role of ABA signaling in fruit development, the expression of two AREB-like ..
  84. Avila C, Arévalo Soliz L, Jia L, Navarre D, Chen Z, Howe G, et al. Loss of function of FATTY ACID DESATURASE7 in tomato enhances basal aphid resistance in a salicylate-dependent manner. Plant Physiol. 2012;158:2028-41 pubmed publisher
    ..The suppressor of prosystemin-mediated responses2 (spr2) mutation in tomato (Solanum lycopersicum), which eliminates the function of FAD7, reduces the settling behavior, survival, and fecundity of the ..
  85. Kesanakurti D, Kolattukudy P, Kirti P. Fruit-specific overexpression of wound-induced tap1 under E8 promoter in tomato confers resistance to fungal pathogens at ripening stage. Physiol Plant. 2012;146:136-48 pubmed publisher
    Based on high economic importance and nutritious value of tomato fruits and as previous studies employed E8 promoter in fruit ripening-specific gene expression, we have developed transgenic tomato plants overexpressing tomato anionic ..
  86. Zhang C, Liu J, Zhang Y, Cai X, Gong P, Zhang J, et al. Overexpression of SlGMEs leads to ascorbate accumulation with enhanced oxidative stress, cold, and salt tolerance in tomato. Plant Cell Rep. 2011;30:389-98 pubmed publisher
    ..In this study, two members of the GME gene family were isolated from tomato (Solanum lycopersicum). Both SlGME genes encode 376 amino acids and share a 92% similarity with each other...
  87. Wang H, Yu C, Zhu Z, Yu X. Overexpression in tobacco of a tomato GMPase gene improves tolerance to both low and high temperature stress by enhancing antioxidation capacity. Plant Cell Rep. 2011;30:1029-40 pubmed publisher
    ..Herein, a GMPase (accession ID DQ449030) was identified and cloned from tomato. The full-length cDNA sequence of this gene contains 1,498 bp nucleotides encoding a putative protein with 361 ..
  88. Bageshwar U, Taneja Bageshwar S, Moharram H, Binzel M. Two isoforms of the A subunit of the vacuolar H(+)-ATPase in Lycopersicon esculentum: highly similar proteins but divergent patterns of tissue localization. Planta. 2005;220:632-43 pubmed publisher
    ..We isolated two full-length cDNA clones (VHA-A1 and VHA-A2) from tomato (Lycopersicon esculentum Mill. cv...
  89. Ruffel S, Gallois J, Lesage M, Caranta C. The recessive potyvirus resistance gene pot-1 is the tomato orthologue of the pepper pvr2-eIF4E gene. Mol Genet Genomics. 2005;274:346-53 pubmed
    ..of the recessive resistance to PVY and Tobacco etch virus (TEV) controlled by the pot-1 locus in tomato (Lycopersicon esculentum; now Solanum lycopersicum) was investigated...
  90. Yamamoto N, Tsugane T, Watanabe M, Yano K, Maeda F, Kuwata C, et al. Expressed sequence tags from the laboratory-grown miniature tomato (Lycopersicon esculentum) cultivar Micro-Tom and mining for single nucleotide polymorphisms and insertions/deletions in tomato cultivars. Gene. 2005;356:127-34 pubmed
    Laboratory-grown miniature tomato (Lycopersicon esculentum) cultivar Micro-Tom has attracted attention as a host for functional genomics research...
  91. Mayrose M, Ekengren S, Melech Bonfil S, Martin G, Sessa G. A novel link between tomato GRAS genes, plant disease resistance and mechanical stress response. Mol Plant Pathol. 2006;7:593-604 pubmed publisher
    ..Here we examine the complexity of the GRAS gene family in tomato (Solanum lycopersicum) and investigate its role in disease resistance and mechanical stress...
  92. Sharfman M, Bar M, Ehrlich M, Schuster S, Melech Bonfil S, Ezer R, et al. Endosomal signaling of the tomato leucine-rich repeat receptor-like protein LeEix2. Plant J. 2011;68:413-23 pubmed publisher
    ..Our knowledge of how RLPs that do not contain a kinase or Toll domain function is very limited. The tomato RLP receptor LeEix2 signals to induce defense responses mediated by the fungal protein ethylene-inducing xylanase (..