Methanothermobacter thermautotrophicus

Summary

Alias: "Methanobacterium thermoautotrophicus" (sic) Zeikus and Wolfe 1972, Methanobacterium thermalcaliphilum, Methanobacterium thermalcaliphilum corrig. Blotevogel et al. 1988, Methanobacterium thermoalcaliphilum, Methanobacterium thermoautotrophicum, Methanobacterium thermoformicicum, Methanobacterium thermoformicicum Zhilina and Ilarionov 1986, Methanothermobacter thermautotrophicus (Zeikus and Wolfe 1972) Wasserfallen et al. 2000, Methanobacterium thermoformicium, Methanobacterium thermoformicum, Methanothermobacter thermoautotrophicus, Methanobacterium thermautotrophicum corrig. Zeikus & Wolfe 1972 (Approved Lists 1980) emend Touzel e

Top Publications

  1. Pore S, Engineer A, Dagar S, Dhakephalkar P. Meta-omics based analyses of microbiome involved in biomethanation of rice straw in a thermophilic anaerobic bioreactor under optimized conditions. Bioresour Technol. 2019;279:25-33 pubmed publisher
    ..was performed at 55 °C without thermochemical pretreatment using cattle dung supplemented with Methanothermobacter thermautotrophicus strains...
  2. Nureki O, O Donoghue P, Watanabe N, Ohmori A, Oshikane H, Araiso Y, et al. Structure of an archaeal non-discriminating glutamyl-tRNA synthetase: a missing link in the evolution of Gln-tRNAGln formation. Nucleic Acids Res. 2010;38:7286-97 pubmed publisher
    ..Here, we present the crystal structure of the Methanothermobacter thermautotrophicus ND-GluRS, which is the evolutionary predecessor of both the glutaminyl-tRNA synthetase (GlnRS) and ..
  3. Padmanabhan B, Yokoyama S, Bessho Y. Crystal structure of putative CbiT from Methanocaldococcus jannaschii: an intermediate enzyme activity in cobalamin (vitamin B12) biosynthesis. BMC Struct Biol. 2013;13:10 pubmed publisher
    ..structure and the tetrameric arrangements are highly homologous to those found in MT0146/CbiT from Methanobacterium thermoautotrophicum. The conservation of functional residues in the binding site for the co-factor, AdoMet, and in the ..
  4. Silva A, Chechik M, Byrne R, Waterman D, Ng C, Dodson E, et al. Structure and activity of a novel archaeal β-CASP protein with N-terminal KH domains. Structure. 2011;19:622-32 pubmed publisher
    MTH1203, a β-CASP metallo-β-lactamase family nuclease from the archaeon Methanothermobacter thermautotrophicus, was identified as a putative nuclease that might contribute to RNA processing...
  5. Yang J, Zhang C, Yuan X, Zhang M, Mo X, Tan L, et al. Metabolic engineering of Methylobacterium extorquens AM1 for the production of butadiene precursor. Microb Cell Fact. 2018;17:194 pubmed publisher
    ..kinase (THK) from Escherichia coli, an isopentenyl phosphate kinase (IPK) from Methanothermobacter thermautotrophicus and an aldehyde/alcohol dehydrogenase (ADHE2) from Clostridium acetobutylicum...
  6. Mabanglo M, Schubert H, Chen M, Hill C, Poulter C. X-ray structures of isopentenyl phosphate kinase. ACS Chem Biol. 2010;5:517-27 pubmed publisher
    ..with both substrates and products from Thermoplasma acidophilum (THA), as well as the IPK from Methanothermobacter thermautotrophicus (MTH), by means of single-wavelength anomalous diffraction (SAD) and molecular replacement...
  7. Prathiviraj R, Chellapandi P. Functional annotation of operome from Methanothermobacter thermautotrophicus ΔH: An insight to metabolic gap filling. Int J Biol Macromol. 2019;123:350-362 pubmed publisher
    b>Methanothermobacter thermautotrophicus ΔH (MTH) is a potential methanogen known to reduce CO2 with H2 for producing methane biofuel in thermophilic digesters. The genome of this organism contains ~50...
  8. Wang X, Chen J, Liu C, Luo J, Yan X, Aihua Ai -, et al. Over-expression of a protein disulfide isomerase gene from Methanothermobacter thermautotrophicus, enhances heat stress tolerance in rice. Gene. 2019;684:124-130 pubmed publisher
    ..isomerase-like protein (PDI) with a chaperone function and disulfide isomerase activity from Methanothermobacter thermautotrophicus delta H, was selected for studying the heat stress tolerance using an ectopic expression method in ..
  9. Shiraishi M, Ishino S, Heffernan M, Cann I, Ishino Y. The mesophilic archaeon Methanosarcina acetivorans counteracts uracil in DNA with multiple enzymes: EndoQ, ExoIII, and UDG. Sci Rep. 2018;8:15791 pubmed publisher
    ..Exonuclease III (ExoIII) from the euryarchaeon Methanothermobacter thermautotrophicus has been described to exhibit endonuclease activity toward uracil-containing DNA...

More Information

Publications41

  1. Esipov R, Kostromina M. Comparative analysis of the effectiveness of C-terminal cleavage intein-based constructs in producing a recombinant analog of anophelin, an anticoagulant from Anopheles albimanus. Appl Biochem Biotechnol. 2015;175:2468-88 pubmed publisher
    ..We prepared two new such constructs with mini-inteins GyrA from Mycobacterium xenopi and RIR1 from Methanobacterium thermoautotrophicum. Together with the previous construct based on the artificial mini-intein derived from ..
  2. Niu Q, Qiao W, Qiang H, Li Y. Microbial community shifts and biogas conversion computation during steady, inhibited and recovered stages of thermophilic methane fermentation on chicken manure with a wide variation of ammonia. Bioresour Technol. 2013;146:223-233 pubmed publisher
    ..Hydrogenotrophic Methanothermobacter thermautotrophicus str...
  3. Bu F, Dong N, Kumar Khanal S, Xie L, Zhou Q. Effects of CO on hydrogenotrophic methanogenesis under thermophilic and extreme-thermophilic conditions: Microbial community and biomethanation pathways. Bioresour Technol. 2018;266:364-373 pubmed publisher
    ..b>Methanothermobacter thermoautotrophicus was the dominant methanogen at both temperatures and was the main functional archaea associated ..
  4. Menezes A, Cumbers J, Hogan J, Arkin A. Towards synthetic biological approaches to resource utilization on space missions. J R Soc Interface. 2015;12:20140715 pubmed publisher
    ..for 916 day Martian missions: 205 days of high-quality methane and oxygen Mars bioproduction with Methanobacterium thermoautotrophicum can reduce the mass of a Martian fuel-manufacture plant by 56%; 496 days of biomass generation with ..
  5. Ng C, Waterman D, Antson A, Ortiz Lombardía M. Structure of the Methanothermobacter thermautotrophicus exosome RNase PH ring. Acta Crystallogr D Biol Crystallogr. 2010;66:522-8 pubmed publisher
    ..the crystal structure of the RNase PH ring from the exosome of the anaerobic methanogenic archaeon Methanothermobacter thermautotrophicus is described at 2.65 A resolution...
  6. Zhelkovsky A, McReynolds L. Polynucleotide 3'-terminal phosphate modifications by RNA and DNA ligases. J Biol Chem. 2014;289:33608-16 pubmed publisher
    ..In this work, we describe the ability of the thermophilic RNA ligase MthRnl from Methanobacterium thermoautotrophicum to recognize and modify the 3'-terminal phosphate of RNA and single-stranded DNA (ssDNA)...
  7. Dong N, Bu F, Zhou Q, Khanal S, Xie L. Performance and microbial community of hydrogenotrophic methanogenesis under thermophilic and extreme-thermophilic conditions. Bioresour Technol. 2018;266:454-462 pubmed publisher
    ..Extreme-thermophilic condition resulted in a shift in methanogenesis pathway from acetoclastic methanogenesis to hydrogenotrophic methanogenesis with the enrichment of Methanothermobacter thermautotrophicus.
  8. Attri P, Han J, Choi S, Choi E, Bogaerts A, Lee W. CAP modifies the structure of a model protein from thermophilic bacteria: mechanisms of CAP-mediated inactivation. Sci Rep. 2018;8:10218 pubmed publisher
    ..We focus on MTH1880 (MTH) from Methanobacterium thermoautotrophicum as model protein, which we treated with dielectric barrier discharge (DBD) plasma operating in air ..
  9. Treu L, Kougias P, de Diego Díaz B, Campanaro S, Bassani I, Fernandez Rodriguez J, et al. Two-year microbial adaptation during hydrogen-mediated biogas upgrading process in a serial reactor configuration. Bioresour Technol. 2018;264:140-147 pubmed publisher
    ..in the first time point, Candidatus Methanoculleus thermohydrogenotrophicum, was replaced by Methanothermobacter thermautotrophicus, becoming dominant after the community adaptation...
  10. Ng C, Waterman D, Koonin E, Walters A, Chong J, Isupov M, et al. Conformational flexibility and molecular interactions of an archaeal homologue of the Shwachman-Bodian-Diamond syndrome protein. BMC Struct Biol. 2009;9:32 pubmed publisher
    ..We determined the crystal structure of the SBDS orthologue from Methanothermobacter thermautotrophicus (mthSBDS)...
  11. Wiedemann C, Szambowska A, Häfner S, Ohlenschläger O, Gührs K, Görlach M. Structure and regulatory role of the C-terminal winged helix domain of the archaeal minichromosome maintenance complex. Nucleic Acids Res. 2015;43:2958-67 pubmed publisher
    ..structure of the C-terminal domains of the archaeal MCMs of Sulfolobus solfataricus (Sso) and Methanothermobacter thermautotrophicus (Mth)...
  12. Wang H, Fotidis I, Angelidaki I. Ammonia effect on hydrogenotrophic methanogens and syntrophic acetate-oxidizing bacteria. FEMS Microbiol Ecol. 2015;91: pubmed publisher
    ..e. Methanoculleus bourgensis, Methanobacterium congolense, Methanoculleu thermophilus and Methanothermobacter thermautotrophicus), two SAOB (i.e...
  13. Fay A, Wiig J, Lee C, Hu Y. Identification and characterization of functional homologs of nitrogenase cofactor biosynthesis protein NifB from methanogens. Proc Natl Acad Sci U S A. 2015;112:14829-33 pubmed publisher
    ..of two naturally "truncated" homologs of NifB from Methanosarcina acetivorans (NifB(Ma)) and Methanobacterium thermoautotrophicum (NifB(Mt)), which contain a SAM-binding domain at the N terminus but lack a domain toward the C ..
  14. Alfaro N, Fdz Polanco M, Fdz Polanco F, Díaz I. Evaluation of process performance, energy consumption and microbiota characterization in a ceramic membrane bioreactor for ex-situ biomethanation of H2 and CO2. Bioresour Technol. 2018;258:142-150 pubmed publisher
    ..b>Methanothermobacter thermautotrophicus was the archaea found with high level of similarity...
  15. Gu H, Yoshinari S, Ghosh R, Ignatochkina A, Gollnick P, Murakami K, et al. Structural and mutational analysis of archaeal ATP-dependent RNA ligase identifies amino acids required for RNA binding and catalysis. Nucleic Acids Res. 2016;44:2337-47 pubmed publisher
    An ATP-dependent RNA ligase from Methanobacterium thermoautotrophicum (MthRnl) catalyzes intramolecular ligation of single-stranded RNA to form a closed circular RNA via covalent ligase-AMP and RNA-adenylylate intermediate...
  16. Cass S, Haas K, Stoll B, Alkhnbashi O, Sharma K, Urlaub H, et al. The role of Cas8 in type I CRISPR interference. Biosci Rep. 2015;35: pubmed publisher
    ..We analysed Cas8 homologues from type IB CRISPR systems in archaea Haloferax volcanii (Hvo) and Methanothermobacter thermautotrophicus (Mth)...
  17. Bassani I, Kougias P, Treu L, Porté H, Campanaro S, Angelidaki I. Optimization of hydrogen dispersion in thermophilic up-flow reactors for ex situ biogas upgrading. Bioresour Technol. 2017;234:310-319 pubmed publisher
    ..Additionally, the massive increase of hydrogenotrophic methanogens, such as Methanothermobacter thermautotrophicus, and syntrophic bacteria demonstrates the selection-effect of H2 on community ..
  18. Schermerhorn K, Tanner N, Kelman Z, Gardner A. High-temperature single-molecule kinetic analysis of thermophilic archaeal MCM helicases. Nucleic Acids Res. 2016;44:8764-8771 pubmed
    ..to quantitatively measure long-range DNA unwinding of individual DNA helicases from the archaeons Methanothermobacter thermautotrophicus (Mth) and Thermococcus sp. 9°N (9°N)...
  19. Bharathi M, Chellapandi P. Intergenomic evolution and metabolic cross-talk between rumen and thermophilic autotrophic methanogenic archaea. Mol Phylogenet Evol. 2017;107:293-304 pubmed publisher
    ..its intergenomic relationship and metabolic adjustment acquired from the genomic content of Methanothermobacter thermautotrophicus ΔH...
  20. Watanabe K, Koyama M, Ueda J, Ban S, Kurosawa N, Toda T. Effect of operating temperature on anaerobic digestion of the Brazilian waterweed Egeria densa and its microbial community. Anaerobe. 2017;47:8-17 pubmed publisher
    ..Methanosarcina thermophila (87% at 55 °C, 54% at 65 °C) and Methanothermobacter thermautotrophicus (13% at 55 °C, 46% at 65 °C) were detected under thermophilic conditions...
  21. Crnkovic A, Čavužić M, Godinic Mikulcic V, Anderluh G, Weygand Đurašević I, Gruic Sovulj I. An archaeal aminoacyl-tRNA synthetase complex for improved substrate quality control. Biochimie. 2018;147:36-45 pubmed publisher
    ..In the archaeon Methanothermobacter thermautotrophicus arginyl- and seryl-tRNA synthetase (ArgRS and SerRS, respectively) form a complex which enhances ..
  22. Bokranz M, Klein A, Meile L. Complete nucleotide sequence of plasmid pME2001 of Methanobacterium thermoautotrophicum (Marburg). Nucleic Acids Res. 1990;18:363 pubmed
  23. Kougias P, Treu L, Benavente D, Boe K, Campanaro S, Angelidaki I. Ex-situ biogas upgrading and enhancement in different reactor systems. Bioresour Technol. 2017;225:429-437 pubmed publisher
    ..b>Methanothermobacter thermautotrophicus was the predominant methanogen in the biofilm formed on top of the diffuser surface in the bubble ..
  24. Moitra K. Releasing the "GENI": integrating authentic microbial genomics research into the classroom through GENI-ACT. FEMS Microbiol Lett. 2017;364: pubmed publisher
    ..Students annotated 60 predicted ABC genes of Methanothermobacter thermautotrophicus and Methanobacterium sp...
  25. Yoshinari S, Liu Y, Gollnick P, Ho C. Cleavage of 3'-terminal adenosine by archaeal ATP-dependent RNA ligase. Sci Rep. 2017;7:11662 pubmed publisher
    b>Methanothermobacter thermoautotrophicus RNA ligase (MthRnl) catalyzes formation of phosphodiester bonds between the 5'-phosphate and 3'-hydroxyl termini of single-stranded RNAs...
  26. Westerholm M, Muller B, Singh A, Karlsson Lindsjö O, Schnürer A. Detection of novel syntrophic acetate-oxidizing bacteria from biogas processes by continuous acetate enrichment approaches. Microb Biotechnol. 2017;: pubmed publisher
    ..The hydrogenotrophic methanogens Methanoculleus bourgensis (mesophilic) and Methanothermobacter thermautotrophicus (thermophilic) dominated archaeal communities in the high-acetate chemostats...
  27. Khilyas I, Sorokin A, Kiseleva L, Simpson D, Fedorovich V, Sharipova M, et al. Comparative Metagenomic Analysis of Electrogenic Microbial Communities in Differentially Inoculated Swine Wastewater-Fed Microbial Fuel Cells. Scientifica (Cairo). 2017;2017:7616359 pubmed publisher
    ..of the SS- and IGBS-inoculated MFCs were dominated by Methanosarcina barkeri and Methanothermobacter thermautotrophicus, respectively...
  28. NOLLING J, van Eeden F, Eggen R, de Vos W. Modular organization of related Archaeal plasmids encoding different restriction-modification systems in Methanobacterium thermoformicicum. Nucleic Acids Res. 1992;20:6501-7 pubmed
    ..of the related 13513-bp plasmid pFV1 and the 11014-bp plasmid pFZ1 from the thermophilic archaeon Methanobacterium thermoformicicum THF and Z-245, respectively, revealed a homologous, approximately 8...
  29. Mol C, Arvai A, Begley T, Cunningham R, Tainer J. Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases. J Mol Biol. 2002;315:373-84 pubmed publisher
  30. Luo Y, Leisinger T, Wasserfallen A. Comparative sequence analysis of plasmids pME2001 and pME2200 of methanothermobacter marburgensis strains Marburg and ZH3. Plasmid. 2001;45:18-30 pubmed publisher
    ..pME2001 and pME2200 from the thermophilic archaeon Methanothermobacter marburgensis (formerly Methanobacterium thermoautotrophicum) strains Marburg and ZH3, respectively, revealed an almost identical common backbone structure and ..
  31. N lling J, de Vos W. Characterization of the archaeal, plasmid-encoded type II restriction-modification system MthTI from Methanobacterium thermoformicicum THF: homology to the bacterial NgoPII system from Neisseria gonorrhoeae. J Bacteriol. 1992;174:5719-26 pubmed
    ..system, designated MthTI, was localized on plasmid pFV1 from the thermophilic archaeon Methanobacterium thermoformicicum THF...
  32. N lling J, de Vos W. Identification of the CTAG-recognizing restriction-modification systems MthZI and MthFI from Methanobacterium thermoformicicum and characterization of the plasmid-encoded mthZIM gene. Nucleic Acids Res. 1992;20:5047-52 pubmed
    ..modification (R/M) systems, designated MthZI and MthFI, were identified in the thermophilic archaeon Methanobacterium thermoformicicum strains Z-245 and FTF, respectively...