Escherichia coli

Summary

Alias: Escherichia coli retron Ec86, Escherichia coli retron Ec79, Escherichia coli retron Ec67, Escherichia coli retron Ec107, "Bacterium coli commune" Escherich 1885, Escherichia coli (Migula 1895) Castellani and Chalmers 1919, Bacterium coli commune, Bacterium coli, Bacillus coli, "Bacterium coli" (Migula 1895) Lehmann and Neumann 1896, "Bacillus coli" Migula 1895, Escherchia coli, Eschericia coli, Enterococcus coli, bacterium 10a, bacterium E3

Top Publications

  1. Schmidt H, Kernbach C, Karch H. Analysis of the EHEC hly operon and its location in the physical map of the large plasmid of enterohaemorrhagic Escherichia coli O157:h7. Microbiology. 1996;142 ( Pt 4):907-14 pubmed
    Almost all clinical enterohaemorrhagic Escherichia coli (EHEC) O157:H7 isolates harbour a large virulence plasmid designated pO157. In this study, pO157 of EHEC O157:H7 reference strain EDL 933 was characterized at the molecular level...
  2. Sabri M, Leveille S, Dozois C. A SitABCD homologue from an avian pathogenic Escherichia coli strain mediates transport of iron and manganese and resistance to hydrogen peroxide. Microbiology. 2006;152:745-58 pubmed
    ..ion transporters, homologous to Salmonella enterica SitABCD, has been identified in the avian pathogenic Escherichia coli (APEC) strain chi7122...
  3. Recchia G, Hall R. Gene cassettes: a new class of mobile element. Microbiology. 1995;141 ( Pt 12):3015-27 pubmed
  4. Burian J, Guller L, Macor M, Kay W. Small cryptic plasmids of multiplasmid, clinical Escherichia coli. Plasmid. 1997;37:2-14 pubmed
    Clinical isolates of Escherichia coli were found to host a multiplicity of plasmids. These were resolved from plasmid gel profiles, from the properties of various transconjugants and transformants of E...
  5. Guyer D, Kao J, Mobley H. Genomic analysis of a pathogenicity island in uropathogenic Escherichia coli CFT073: distribution of homologous sequences among isolates from patients with pyelonephritis, cystitis, and Catheter-associated bacteriuria and from fecal samples. Infect Immun. 1998;66:4411-7 pubmed
    Urinary tract infection is the most frequently diagnosed kidney and urologic disease and Escherichia coli is by far the most common etiologic agent...
  6. Dobrindt U, Blum Oehler G, Nagy G, Schneider G, Johann A, Gottschalk G, et al. Genetic structure and distribution of four pathogenicity islands (PAI I(536) to PAI IV(536)) of uropathogenic Escherichia coli strain 536. Infect Immun. 2002;70:6365-72 pubmed
    For the uropathogenic Escherichia coli strain 536 (O6:K15:H31), the DNA sequences of three pathogenicity islands (PAIs) (PAI I(536) to PAI III(536)) and their flanking regions (about 270 kb) were determined to further characterize the ..
  7. Dozois C, Daigle F, Curtiss R. Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain. Proc Natl Acad Sci U S A. 2003;100:247-52 pubmed
    b>Escherichia coli is a diverse bacterial species that comprises commensal nonpathogenic strains such as E. coli K-12 and pathogenic strains that cause a variety of diseases in different host species. Avian pathogenic E...
  8. Morin N, Santiago A, Ernst R, Guillot S, Nataro J. Characterization of the AggR regulon in enteroaggregative Escherichia coli. Infect Immun. 2013;81:122-32 pubmed publisher
    AggR is a transcriptional regulator of enteroaggregative Escherichia coli (EAEC) and has been proposed as the defining factor for typical EAEC strains...
  9. Kao J, Stucker D, Warren J, Mobley H. Pathogenicity island sequences of pyelonephritogenic Escherichia coli CFT073 are associated with virulent uropathogenic strains. Infect Immun. 1997;65:2812-20 pubmed
    Urinary tract infection is the most frequently diagnosed kidney and urologic disease, and Escherichia coli is by far the most common etiologic agent...

More Information

Publications710 found, 100 shown here

  1. Brunder W, Schmidt H, Frosch M, Karch H. The large plasmids of Shiga-toxin-producing Escherichia coli (STEC) are highly variable genetic elements. Microbiology. 1999;145 ( Pt 5):1005-14 pubmed
    Shiga-toxin-producing Escherichia coli (STEC) of different serotypes are known to harbour large plasmids...
  2. Real J, Munro P, Buisson Touati C, Lemichez E, Boquet P, Landraud L. Specificity of immunomodulator secretion in urinary samples in response to infection by alpha-hemolysin and CNF1 bearing uropathogenic Escherichia coli. Cytokine. 2007;37:22-5 pubmed
    b>Escherichia coli are the most common etiological agents of urinary tract infections (UTIs). Uropathogenic E. coli (UPECs) produce specific toxins including the cytotoxic necrotizing factor-1 (CNF1) and the alpha-hemolysin (alpha-Hly)...
  3. Valverde A, Canton R, Garcillán Barcia M, Novais A, Galan J, Alvarado A, et al. Spread of bla(CTX-M-14) is driven mainly by IncK plasmids disseminated among Escherichia coli phylogroups A, B1, and D in Spain. Antimicrob Agents Chemother. 2009;53:5204-12 pubmed publisher
    ..In the present Escherichia coli multilevel population genetic study involving the characterization of phylogroups, clones, plasmids, and ..
  4. Gomez S, Pasteran F, Faccone D, Tijet N, Rapoport M, Lucero C, et al. Clonal dissemination of Klebsiella pneumoniae ST258 harbouring KPC-2 in Argentina. Clin Microbiol Infect. 2011;17:1520-4 pubmed publisher
    ..bla(KPC-2) was associated with IncL/M transferable plasmids; the second was the abrupt clonal spread of K. pneumoniae ST258 harbouring bla(KPC-2) in Tn4401a. ..
  5. Zheng H, Zeng Z, Chen S, Liu Y, Yao Q, Deng Y, et al. Prevalence and characterisation of CTX-M ?-lactamases amongst Escherichia coli isolates from healthy food animals in China. Int J Antimicrob Agents. 2012;39:305-10 pubmed publisher
    ..Intestinal Escherichia coli obtained from healthy food animals (pigs, cattle and poultry) in China were tested for the presence of ESBL ..
  6. Levesque C, Brassard S, Lapointe J, Roy P. Diversity and relative strength of tandem promoters for the antibiotic-resistance genes of several integrons. Gene. 1994;142:49-54 pubmed
    ..The strongest promoter is the version (TTGACAN17TAAACT) found in plasmid R388 and in transposon Tn1696. This promoter is six times more efficient than the derepressed tac promoter. ..
  7. Praszkier J, Wei T, Siemering K, Pittard J. Comparative analysis of the replication regions of IncB, IncK, and IncZ plasmids. J Bacteriol. 1991;173:2393-7 pubmed
    ..RepA of K and B plasmids were homologous, whereas RepA of Z resembled RepA1 of FII plasmid. Sequences upstream of RepA were conserved in the three I-complex plasmids. Group B and Z plasmids were incompatible. ..
  8. Sundstrom L, Radstrom P, Swedberg G, Skold O. Site-specific recombination promotes linkage between trimethoprim- and sulfonamide resistance genes. Sequence characterization of dhfrV and sulI and a recombination active locus of Tn21. Mol Gen Genet. 1988;213:191-201 pubmed
    ..Similar structures were found at the 3' ends of the antibiotic resistance genes in Tn7, which could indicate similar recombination mechanisms to be effective in the evolutionary construction of all these different resistance elements. ..
  9. Al Obaidi M, Desa M. Mechanisms of Blood Brain Barrier Disruption by Different Types of Bacteria, and Bacterial-Host Interactions Facilitate the Bacterial Pathogen Invading the Brain. Cell Mol Neurobiol. 2018;38:1349-1368 pubmed publisher
    ..b>Escherichia coli bind to BMECs through LR, resulting in IL-6 and IL-8 release and iNOS production, as well as resulting in ..
  10. Li L, Heidemann Olsen R, Ye L, Yan H, Nie Q, Meng H, et al. Antimicrobial Resistance and Resistance Genes in Aerobic Bacteria Isolated from Pork at Slaughter. J Food Prot. 2016;79:589-97 pubmed publisher
    ..Plasmid associated intI1 and androgen receptor- encoding genes were transferred into Escherichia coli J53 and E. coli DH5? by conjugation and transformation experiments, respectively...
  11. Roy S, Esmaeilniakooshkghazi A, Patnaik S, Wang Y, George S, Ahrorov A, et al. Villin-1 and Gelsolin Regulate Changes in Actin Dynamics That Affect Cell Survival Signaling Pathways and Intestinal Inflammation. Gastroenterology. 2018;154:1405-1420.e2 pubmed publisher
    ..were or were not (controls) exposed to cell stressors such as tumor necrosis factor and adherent-invasive Escherichia coli. Distal ileum tissues were collected from mice; IECs and enteroids were cultured and analyzed by histology, ..
  12. Dowarah R, Verma A, Agarwal N, Singh P, Singh B. Selection and characterization of probiotic lactic acid bacteria and its impact on growth, nutrient digestibility, health and antioxidant status in weaned piglets. PLoS ONE. 2018;13:e0192978 pubmed publisher
    ..Except three isolates, all showed antagonistic activity (>60% co-culture activity) against Escherichia coli, Salmonella Enteritidis, Salmonella serotype (ser.) Typhimurium, Staphylococcus intermedius, Staph...
  13. Cianciotto N, White R. Expanding Role of Type II Secretion in Bacterial Pathogenesis and Beyond. Infect Immun. 2017;85: pubmed publisher
    ..include Acinetobacter baumannii, Burkholderia pseudomallei, Chlamydia trachomatis, Escherichia coli, Klebsiella pneumoniae, Legionella pneumophila, Pseudomonas aeruginosa, ..
  14. Pletzer D, Mansour S, Wuerth K, Rahanjam N, Hancock R. New Mouse Model for Chronic Infections by Gram-Negative Bacteria Enabling the Study of Anti-Infective Efficacy and Host-Microbe Interactions. MBio. 2017;8: pubmed publisher
    ..pathogens, Acinetobacter baumannii, Klebsiella pneumoniae, Enterobacter cloacae, and Escherichia coli This model enabled noninvasive imaging and tracking of lux-tagged bacteria, the influx of ..
  15. Yang X, Zou W, Zeng J, Xie S, An T, Luo X, et al. Prevalence of antimicrobial resistance and integron gene cassettes in Escherichia coli isolated from yaks (Poephagus grunniens) in Aba Tibetan Autonomous Prefecture, China. Microb Pathog. 2017;111:274-279 pubmed publisher
    b>Escherichia coli (E. coli) is one of the most relevant opportunistic pathogenic bacteria as it may cause severe morbidity and mortality in yaks (poephagus grunniens)...
  16. Chiu C, Lin T, Wu R, Yang Y, Hsiao P, Lee Y, et al. Etiologies of community-onset urinary tract infections requiring hospitalization and antimicrobial susceptibilities of causative microorganisms. J Microbiol Immunol Infect. 2017;50:879-885 pubmed publisher
    ..Their mean age was 71.9 years, and 35.2% of the patients were male. Escherichia coli (54.5%) was the most common uropathogen, followed by Klebsiella pneumoniae (13.1%), Enterococcus spp. (7...
  17. Mikołajczyk K, Kaczmarek R, Czerwinski M. Can mutations in the gene encoding transcription factor EKLF (Erythroid Krüppel-Like Factor) protect us against infectious and parasitic diseases?. Postepy Hig Med Dosw (Online). 2016;70:1068-1086 pubmed
    ..for protozoans (such as Plasmodium falciparum or Plasmodium vivax), bacteria (like uropathogenic strains of Escherichia coli, Neisseria meningitidis), and toxins (Shiga toxins), which may cause several dangerous diseases including ..
  18. Anssour L, Messai Y, Estepa V, Torres C, Bakour R. Characteristics of ciprofloxacin-resistant Enterobacteriaceae isolates recovered from wastewater of an Algerian hospital. J Infect Dev Ctries. 2016;10:728-34 pubmed publisher
    ..A total of 17 ciprofloxacin-resistant isolates were characterized: Escherichia coli, Escherichia vulneris, Klebsiella pneumoniae, Klebsiella oxytoca, Citrobacter freundii, and Citrobacter ..
  19. Jean S, Coombs G, Ling T, Balaji V, Rodrigues C, Mikamo H, et al. Epidemiology and antimicrobial susceptibility profiles of pathogens causing urinary tract infections in the Asia-Pacific region: Results from the Study for Monitoring Antimicrobial Resistance Trends (SMART), 2010-2013. Int J Antimicrob Agents. 2016;47:328-34 pubmed publisher
    ..These isolates comprised Enterobacteriaceae species (mainly Escherichia coli, Klebsiella pneumoniae, Proteus mirabilis, Klebsiella oxytoca, Enterobacter cloacae and Morganella morganii) ..
  20. Ben Said L, Jouini A, Klibi N, Dziri R, Alonso C, Boudabous A, et al. Detection of extended-spectrum beta-lactamase (ESBL)-producing Enterobacteriaceae in vegetables, soil and water of the farm environment in Tunisia. Int J Food Microbiol. 2015;203:86-92 pubmed publisher
    ..9%), recovering 15 ESBL-Eb. Isolates and ESBL genes detected were: Escherichia coli (n=8: 5 blaCTX-M-1, 2 blaCTX-M-15 and one blaCTX-M-14), Citrobacter freundii (n=4: 3 blaCTX-M-15 and one ..
  21. Assob J, Kamga H, Nsagha D, Njunda A, Nde P, Asongalem E, et al. Antimicrobial and toxicological activities of five medicinal plant species from Cameroon traditional medicine. BMC Complement Altern Med. 2011;11:70 pubmed publisher
    ..including two Gram positive species (Staphylococcus aureus, Enterococcus faecalis), and six Gram negative (Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, Proteus mirabilis, Shigella flexneri, Salmonella typhi) and ..
  22. Ercoli G, Tani C, Pezzicoli A, Vacca I, Martinelli M, Pecetta S, et al. LytM proteins play a crucial role in cell separation, outer membrane composition, and pathogenesis in nontypeable Haemophilus influenzae. MBio. 2015;6:e02575 pubmed publisher
    ..and the proteins encoded by the ORFs were named YebA, EnvC, and NlpD on the basis of their homology with the Escherichia coli proteins...
  23. Nagy B, Szmolka A, Smole Možina S, Kovač J, Strauss A, Schlager S, et al. Virulence and antimicrobial resistance determinants of verotoxigenic Escherichia coli (VTEC) and of multidrug-resistant E. coli from foods of animal origin illegally imported to the EU by flight passengers. Int J Food Microbiol. 2015;209:52-9 pubmed publisher
    The aim of this study was to reveal phenotype/genotype characteristics of verotoxigenic Escherichia coli (VTEC) and multidrug resistant E...
  24. Barillo D, Barillo A, Korn S, Lam K, Attar P. The antimicrobial spectrum of Xeroform®. Burns. 2017;43:1189-1194 pubmed publisher
    ..Staphylococcus aureus (MSSA), Staphylococcus epidermidis, Pseudomonas aeruginosa, Enterobacter cloacae, Escherichia coli, Candida albicans, Vancomycin resistant Enterococcus, Acinetobacter baumennii, Klebsiella pneumonia, Extended ..
  25. Jiang M, Zhang F, Wan C, Xiong Y, Shah N, Wei H, et al. Evaluation of probiotic properties of Lactobacillus plantarum WLPL04 isolated from human breast milk. J Dairy Sci. 2016;99:1736-1746 pubmed publisher
    ..MCC10104, Shigella sonnei ATCC25931, Enterobacter sakazakii ATCC29544, Salmonella typhimurium ATCC13311, and Escherichia coli O157:H7). Antibiotic susceptibility tests showed that Lb...
  26. Al Salahi R, Abuelizz H, Wadi M, El Dib R, Alotaibi M, Marzouk M. Antimicrobial Activity of Synthesized 2-Methylthiobenzo[g][1,2,4]- triazolo[1,5-a]quinazoline Derivatives. Med Chem. 2016;12:760-766 pubmed
    ..In addition, Gram-negative bacteria were also tested including Pseudomonas aeruginosa (RCMB 0100243-5), Escherichia coli (RCMB 010052-6), Proteus mirabilis (RCMB 01002 54-2), Klebsiella oxytoca (RCMB 01002 83-4) and Enterobacter ..
  27. Hoffman R, Tan Y, Li S, Han Q, Yagi S, Takakura T, et al. Development of Recombinant Methioninase for Cancer Treatment. Methods Mol Biol. 2019;1866:107-131 pubmed publisher
    ..4.1.11) (methioninase, [METase]) gene from Pseudomonas putida has been cloned in Escherichia coli using the polymerase chain reaction (PCR)...
  28. Bianchi L, Gaiani F, Vincenzi F, Kayali S, Di Mario F, Leandro G, et al. Hemolytic uremic syndrome: differential diagnosis with the onset of inflammatory bowel diseases. Acta Biomed. 2018;89:153-157 pubmed publisher
    Shiga-toxin Escherichia coli productor (STEC) provokes frequently an important intestinal damage that may be considered in differential diagnosis with the onset of Inflammatory Bowel Disease (IBD)...
  29. Hou L, Liu L, Dang P, Kang G, Zhang Q, Li D. [Analysis of characteristics of bacteria in respiratory tract infection in 2013-2016 in Heibei 3A hospital: a single-center report of 7 497 patients]. Zhonghua Wei Zhong Bing Ji Jiu Yi Xue. 2017;29:799-804 pubmed publisher
    ..7%), Klebsiella pneumoniae (12.9%), Pseudomonas aeruginosa (11.6%), Escherichia coli (9.5%), Candida glabrata (9.1%), Acinetobacter baumanii (7.9%), Aspergillus (6...
  30. Rahmdel S, Shekarforoush S, Hosseinzadeh S, Torriani S, Gatto V. Antimicrobial spectrum activity of bacteriocinogenic Staphylococcus strains isolated from goat and sheep milk. J Dairy Sci. 2019;102:2928-2940 pubmed publisher
    ..were not effective against gram-negative pathogens, including Salmonella enterica serovar Typhimurium, Escherichia coli O157:H7, and Klebsiella pneumonia as well as the indicator mold Aspergillus fumigatus...
  31. Pawar S, Yao X, Lu C. Spermine and oxacillin stress response on the cell wall synthesis and the global gene expression analysis in Methicillin-resistance Staphylococcus aureus. Genes Genomics. 2019;41:43-59 pubmed publisher
    ..Exogenous spermine exerts a dose-dependent inhibition effect on the growth of Escherichia coli, Salmonella enterica serovar, and S. aureus...
  32. Akdemir Evrendilek G. Empirical prediction and validation of antibacterial inhibitory effects of various plant essential oils on common pathogenic bacteria. Int J Food Microbiol. 2015;202:35-41 pubmed publisher
    ..bacteria of Yersinia enterocolitica, Salmonella Enteritidis, Salmonella Typhimurium, Proteus mirabilis, Escherichia coli O157:H7, and Klebsiella oxytoca...
  33. Richards G, Watson M, Needleman D, Uknalis J, Boyd E, Fay J. Mechanisms for Pseudoalteromonas piscicida-Induced Killing of Vibrios and Other Bacterial Pathogens. Appl Environ Microbiol. 2017;83: pubmed publisher
    ..and Shewanella algae Inhibition also occurred on lawns of Staphylococcus aureus but not on Escherichia coli O157:H7 or Salmonella enterica serovar Typhimurium...
  34. Lu Y, Luo R, Fu Z. [Pathogen distribution and bacterial resistance in children with severe community-acquired pneumonia]. Zhongguo Dang Dai Er Ke Za Zhi. 2017;19:983-988 pubmed
    ..The drug-resistance rates of Escherichia coli and Klebsiella pneumoniae to ampicillin, cefotaxime, and ceftriaxone were above 60%, but they were sensitive ..
  35. Krichen F, Karoud W, Sila A, Abdelmalek B, Ghorbel R, Ellouz Chaabouni S, et al. Extraction, characterization and antimicrobial activity of sulfated polysaccharides from fish skins. Int J Biol Macromol. 2015;75:283-9 pubmed publisher
    ..Listeria monocytogenes (ATCC 43251), Staphylococcus aureus (ATCC 25923), Enterococcus faecalis (ATCC 29212), Escherichia coli (ATCC 25922), Salmonella enterica (ATCC 43972) and Enterobacter sp were evaluated by determining clear growth ..
  36. Johnston K, Dorsey J, Saez J. Stratification and loading of fecal indicator bacteria (FIB) in a tidally muted urban salt marsh. Environ Monit Assess. 2015;187:58 pubmed publisher
    ..Enterococci and Escherichia coli were stratified both by concentration and loading, although these variables portrayed different patterns over ..
  37. Ueda T, Akuta T, Kikuchi Ueda T, Imaizumi K, Ono Y. Improving the soluble expression and purification of recombinant human stem cell factor (SCF) in endotoxin-free Escherichia coli by disulfide shuffling with persulfide. Protein Expr Purif. 2016;120:99-105 pubmed publisher
    ..Previously, we demonstrated that co-expression with thioredoxin increased the solubility of rhSCF in Escherichia coli BL21(DE3), and addition of l-arginine enhanced chromatography performance by removing the endotoxin-masked ..
  38. Xia L, Dai L, Yu Q, Yang Q. Persistent Transmissible Gastroenteritis Virus Infection Enhances Enterotoxigenic Escherichia coli K88 Adhesion by Promoting Epithelial-Mesenchymal Transition in Intestinal Epithelial Cells. J Virol. 2017;91: pubmed publisher
    ..persistent TGEV infection stimulates the epithelial-mesenchymal transition (EMT), and thus enterotoxigenic Escherichia coli (ETEC) can more easily adhere to generating cells...
  39. Xiong C, Li Q, Li S, Chen C, Chen Z, Huang W. In vitro Antimicrobial Activities and Mechanism of 1-Octen-3-ol against Food-related Bacteria and Pathogenic Fungi. J Oleo Sci. 2017;66:1041-1049 pubmed publisher
    ..were evaluated in this paper, including Staphylococcus aureus, Bacillus subtilis, Staphylococcus epidermidis, Escherichia coli, Pseudomonas aeruginosa, Fusarium tricinctum and Fusarium oxysporum...
  40. Qiu Y, Zhang J, Li B, Wen X, Liang P, Huang X. A novel microfluidic system enables visualization and analysis of antibiotic resistance gene transfer to activated sludge bacteria in biofilm. Sci Total Environ. 2018;642:582-590 pubmed publisher
    ..5 × 10-3 via flow cytometry, and T/R for pKJK5-hosted Escherichia coli MG1655 was 8...
  41. Leedjärv A, Ivask A, Virta M. Interplay of different transporters in the mediation of divalent heavy metal resistance in Pseudomonas putida KT2440. J Bacteriol. 2008;190:2680-9 pubmed
    ..putida, improved Zn(2+) resistance and slightly improved Cd(2+) resistance when it was expressed in Escherichia coli. CzcCBA2 contributed to Zn resistance of a czcA1-defective P...
  42. Zhou J, Shen J, Zhang R, Tang X, Li J, Xu B, et al. Molecular and biochemical characterization of a novel multidomain xylanase from Arthrobacter sp. GN16 isolated from the feces of Grus nigricollis. Appl Biochem Biotechnol. 2015;175:573-88 pubmed publisher
    ..and XynAGN16Lpd (GH 10 domain at N-terminus and polysaccharide deacetylases domain) were expressed in Escherichia coli and characterized...
  43. Wall E, Caufield J, Lyons C, Manning K, Dokland T, Christie G. Specific N-terminal cleavage of ribosomal protein L27 in Staphylococcus aureus and related bacteria. Mol Microbiol. 2015;95:258-69 pubmed publisher
    ..Ribosomal biology in eubacteria has largely been studied in the Gram-negative bacterium Escherichia coli; our findings indicate that there are aspects of the basic biology of the ribosome in S...
  44. Poey M, Laviña M. Integrons in uropathogenic Escherichia coli and their relationship with phylogeny and virulence. Microb Pathog. 2014;77:73-7 pubmed publisher
    Uropathogenic Escherichia coli (UPEC) comprise a heterogeneous group of strains...
  45. Alpha C, Campos M, Jacobs Wagner C, Strobel S. Mycofumigation by the volatile organic compound-producing Fungus Muscodor albus induces bacterial cell death through DNA damage. Appl Environ Microbiol. 2015;81:1147-56 pubmed publisher
    ..A single-gene knockout screen revealed high sensitivity for Escherichia coli lacking enzymes in the pathways of DNA repair, DNA metabolic process, and response to stress when exposed to ..
  46. Sanuja S, Agalya A, Umapathy M. Synthesis and characterization of zinc oxide-neem oil-chitosan bionanocomposite for food packaging application. Int J Biol Macromol. 2015;74:76-84 pubmed publisher
    ..Further antibacterial activity by well diffusion assay method was followed against Escherichia coli which were found to have good inhibition effect...
  47. Kong Q, Nakai Y, Kuroda N, Shiratsuchi A, Nagaosa K, Nakanishi Y. Peptidoglycan recognition protein-triggered induction of Escherichia coli gene in Drosophila melanogaster. J Biochem. 2015;157:507-17 pubmed publisher
    ..b>Escherichia coli was treated with a mixture of the extracellular region of peptidoglycan recognition protein (PGRP)-LC and the ..
  48. Shao W, Liu H, Liu X, Sun H, Wang S, Zhang R. pH-responsive release behavior and anti-bacterial activity of bacterial cellulose-silver nanocomposites. Int J Biol Macromol. 2015;76:209-17 pubmed publisher
    ..The anti-bacterial performances of BC-Ag nanocomposites were evaluated with Escherichia coli ATCC 25922, Staphylococcus aureus ATCC 6538, Bacillus subtilis ATCC 9372 and Candida albicans CMCC(F) 98001, ..
  49. Delbeke S, Ceuppens S, Jacxsens L, Uyttendaele M. Survival of Salmonella and Escherichia coli O157:H7 on strawberries, basil, and other leafy greens during storage. J Food Prot. 2015;78:652-60 pubmed publisher
    The survival of Salmonella and Escherichia coli O157:H7 on strawberries, basil leaves, and other leafy greens (spinach leaves, lamb and butterhead lettuce leaves, baby leaves, and fresh-cut iceberg lettuce) was assessed at cold (<7 °..
  50. Zacharias N, Kistemann T, Schreiber C. Application of flow cytometry and PMA-qPCR to distinguish between membrane intact and membrane compromised bacteria cells in an aquatic milieu. Int J Hyg Environ Health. 2015;218:714-22 pubmed publisher
    ..LIVE/DEAD(®) BacLight™ Bacterial Viability Kit with different ratios of Legionella pneumophila and Escherichia coli cells with intact and compromised membranes (heat treated)...
  51. Park S, Kang D. Combination treatment of chlorine dioxide gas and aerosolized sanitizer for inactivating foodborne pathogens on spinach leaves and tomatoes. Int J Food Microbiol. 2015;207:103-8 pubmed publisher
    ..dioxide (ClO2) gas and aerosolized sanitizer, when applied alone or in combination, on the survival of Escherichia coli O157:H7, Salmonella Typhimurium, and Listeria monocytogenes inoculated onto spinach leaves and tomato ..
  52. Xiao Z, Wei W, Wang P, Shi W, Zhu N, Xie M, et al. Synthesis and evaluation of new tyrosyl-tRNA synthetase inhibitors as antibacterial agents based on a N2-(arylacetyl)glycinanilide scaffold. Eur J Med Chem. 2015;102:631-8 pubmed publisher
    ..aureus) and Gram-negative (Escherichia coli and Pseudomonas aeruginosa) bacterial strains...
  53. Pichl C, Feilhauer S, Schwaigerlehner R, Gabor F, Wirth M, Neutsch L. Glycan-mediated uptake in urothelial primary cells: Perspectives for improved intravesical drug delivery in urinary tract infections. Int J Pharm. 2015;495:710-8 pubmed publisher
    ..success is compromised by multiresistance and the efficient mechanism of tissue colonization of uropathogenic Escherichia coli (UPEC)...
  54. Hasegawa S, Goto S, Tsuji H, Okuno T, Asahara T, Nomoto K, et al. Intestinal Dysbiosis and Lowered Serum Lipopolysaccharide-Binding Protein in Parkinson's Disease. PLoS ONE. 2015;10:e0142164 pubmed publisher
    ..PD subjects show abnormal staining for Escherichia coli and α-synuclein in the colon. We recruited 52 PD patients and 36 healthy cohabitants...
  55. Grudniak A, WÅ‚odkowska J, Wolska K. Chaperone DnaJ Influences the Formation of Biofilm by Escherichia coli. Pol J Microbiol. 2015;64:279-83 pubmed
    ..The ability of Escherichia coli ΔdnaJ mutant to form biofilm was studied...
  56. Sharma A, Goyal R, Sharma L. Potential biological efficacy of Pinus plant species against oxidative, inflammatory and microbial disorders. BMC Complement Altern Med. 2016;16:35 pubmed publisher
    ..67. Moreover, plant extracts were found to prevent the growth of microorganisms Pseudomonas aeruginosa, Escherichia coli, Staphylococcus aureus and Candida albicans showing promising antibacterial and antifungal activities ..
  57. Wippel K, Long S. Contributions of Sinorhizobium meliloti Transcriptional Regulator DksA to Bacterial Growth and Efficient Symbiosis with Medicago sativa. J Bacteriol. 2016;198:1374-83 pubmed publisher
    ..Only S. meliloti dksA complemented the metabolic defects of an Escherichia coli dksA mutant. Modifications of the DXXDXA motif in SMc00049 failed to establish DksA function...
  58. Vardakas K, Legakis N, Triarides N, Falagas M. Susceptibility of contemporary isolates to fosfomycin: a systematic review of the literature. Int J Antimicrob Agents. 2016;47:269-85 pubmed publisher
    ..6%, 85.2-100%; Enterococcus faecalis 96.8%, 92.5-100%), of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli from 81% to 100% (95.1%, 94.3-95.9%), of ESBL-producing Klebsiella pneumoniae from 15% to 100% (83.8%, 78...
  59. Liu W, Rodgers G. Olfactomedin 4 expression and functions in innate immunity, inflammation, and cancer. Cancer Metastasis Rev. 2016;35:201-12 pubmed publisher
    ..pylori colonization in the mouse stomach. Olfm4-deficient mice exhibited enhanced immunity against Escherichia coli and Staphylococcus aureus infection...
  60. Pham Thanh D, Thanh Tuyen H, Nguyen Thi Nguyen T, Chung The H, Wick R, Thwaites G, et al. Inducible colistin resistance via a disrupted plasmid-borne mcr-1 gene in a 2008 Vietnamese Shigella sonnei isolate. J Antimicrob Chemother. 2016;71:2314-7 pubmed publisher
    ..The plasmid was conjugated into Escherichia coli and mcr-1 was activated upon exposure to colistin, resulting in highly colistin-resistant transconjugants...
  61. Quan H, Hur Y, Xin C, Kim J, Choi J, Kim M, et al. Stearoyl lysophosphatidylcholine enhances the phagocytic ability of macrophages through the AMP-activated protein kinase/p38 mitogen activated protein kinase pathway. Int Immunopharmacol. 2016;39:328-334 pubmed publisher
    ..Furthermore, sLPC increased the uptake of FITC-conjugated Escherichia coli by macrophages in a dose-dependent manner, and treatment with an AMPK inhibitor (compound C) or siRNA to AMPK?..
  62. Alswat A, Ahmad M, Saleh T, Hussein M, Ibrahim N. Effect of zinc oxide amounts on the properties and antibacterial activities of zeolite/zinc oxide nanocomposite. Mater Sci Eng C Mater Biol Appl. 2016;68:505-511 pubmed publisher
    ..The efficiency of the antibacterial increased with increasing the wt.% from 3 to 8 of ZnO NPs, and it reached 87% against Escherichia coli E266.
  63. Thakur P, Chawla R, Goel R, Narula A, Arora R, Sharma R. Augmenting the potency of third-line antibiotics with Berberis aristata: In vitro synergistic activity against carbapenem-resistant Escherichia coli. J Glob Antimicrob Resist. 2016;6:10-16 pubmed publisher
    ..of the stem bark of Berberis aristata (PTRC-2111-A) with third-line antibiotics against carbapenem-resistant Escherichia coli. PTRC-2111-A was prepared and was characterised using phytochemical- and bioactivity-based fingerprinting...
  64. Connolly J, Roe A. Intracellular d-Serine Accumulation Promotes Genetic Diversity via Modulated Induction of RecA in Enterohemorrhagic Escherichia coli. J Bacteriol. 2016;198:3318-3328 pubmed
    We recently discovered that exposure of enterohemorrhagic Escherichia coli (EHEC) to d-serine resulted in accumulation of this unusual amino acid, induction of the SOS regulon, and downregulation of the type III secretion system that is ..
  65. Zakataeva N, Romanenkov D, Yusupova Y, Skripnikova V, Asahara T, Gronskiy S. Identification, Heterologous Expression, and Functional Characterization of Bacillus subtilis YutF, a HAD Superfamily 5'-Nucleotidase with Broad Substrate Specificity. PLoS ONE. 2016;11:e0167580 pubmed publisher
    ..subtilis. The yutF gene was overexpressed in Escherichia coli, and its product fused to a polyhistidine tag was purified and biochemically characterized as a soluble 5'-..
  66. Yin J, Wang H, Li R, Ravichandran V, Bian X, Li A, et al. A Practical Guide to Recombineering in Photorhabdus and Xenorhabdus. Curr Top Microbiol Immunol. 2017;402:195-213 pubmed publisher
    ..Ideally the advanced technologies available for cloning into recombinant Escherichia coli should also be applicable in other prokaryotes...
  67. Zhou Y, Xie G, Chang L, Wang Y, Gao R. Identification of an archaeal maltooligosyltrehalose trehalohydrolase encoded by an interrupted gene. Extremophiles. 2017;21:537-549 pubmed publisher
    ..MTHases, allowed soluble expression in Escherichia coli of an active acidic and thermophilic enzyme...
  68. Monte D, Fernandes M, Cerdeira L, de Souza T, Mem A, Franco B, et al. Draft Genome Sequences of Colistin-Resistant MCR-1-Producing Escherichia coli ST1850 and ST74 Strains Isolated from Commercial Chicken Meat. Genome Announc. 2017;5: pubmed publisher
    We present here the draft genome sequences of two colistin-resistant mcr-1-carrying Escherichia coli strains belonging to sequence type 74 (ST74) and ST1850, isolated from commercial chicken meat in Brazil...
  69. Cantor J, Krometis L, Sarver E, Cook N, Badgley B. Tracking the downstream impacts of inadequate sanitation in central Appalachia. J Water Health. 2017;15:580-590 pubmed publisher
    ..e. culturable Escherichia coli and a molecular Enterococcus marker), in two Appalachian streams above and below known discharges of ..
  70. Benoni R, Beck C, Garza Sánchez F, Bettati S, Mozzarelli A, Hayes C, et al. Activation of an anti-bacterial toxin by the biosynthetic enzyme CysK: mechanism of binding, interaction specificity and competition with cysteine synthase. Sci Rep. 2017;7:8817 pubmed publisher
    ..The CdiA-CT toxin from uropathogenic Escherichia coli 536 is a latent tRNase that is only active when bound to the cysteine biosynthetic enzyme CysK...
  71. Sarı A, Süzük S, Karatuna O, Ogunc D, Karakoc A, Cizmeci Z, et al. [Results of a multicenter study investigating plasmid mediated colistin resistance genes (mcr-1 and mcr-2) in clinical Enterobacteriaceae ?solates from Turkey]. Mikrobiyol Bul. 2017;51:299-303 pubmed publisher
    ..The first plasmid-mediated colistin resistance gene, mcr-1 was described in Escherichia coli and Klebsiella pneumoniae isolates in December 2015 and followed by another plasmid-mediated colistin ..
  72. Chao A, Bhatti M, DuPont H, Nataro J, Carlin L, Okhuysen P. Clinical features and molecular epidemiology of diarrheagenic Escherichia coli pathotypes identified by fecal gastrointestinal multiplex nucleic acid amplification in patients with cancer and diarrhea. Diagn Microbiol Infect Dis. 2017;89:235-240 pubmed publisher
    Diarrheagenic Escherichia coli (DEC) pathotypes with differing epidemiology and clinical features, are known causes of disease with worldwide occurrence. At a major cancer center in the U.S...
  73. Huff F, Muth C, Naumer C, Meinhardt F. The restriction modification system of Bacillus licheniformis MS1 and generation of a readily transformable deletion mutant. Appl Microbiol Biotechnol. 2017;101:7933-7944 pubmed publisher
    ..BliMSI was produced as recombinant protein in Escherichia coli, purified, and in vitro analysis demonstrated identical restriction endonuclease activity as for ClaI...
  74. Xu D, Zuo J, Chen Z, Lv X, Hu J, Wu X, et al. Different activated methyl cycle pathways affect the pathogenicity of avian pathogenic Escherichia coli. Vet Microbiol. 2017;211:160-168 pubmed publisher
    ..In this study, we evaluated the effects of different AMC pathways on the pathogenicity of avian pathogenic Escherichia coli (APEC)...
  75. Kan S, Huang X, Gumulya Y, Chen K, Arnold F. Genetically programmed chiral organoborane synthesis. Nature. 2017;: pubmed publisher
    ..b>Escherichia coli cells harbouring wild-type cytochrome c from Rhodothermus marinus (Rma cyt c) were found to form carbon-boron ..
  76. Pasdar H, Hedayati Saghavaz B, Foroughifar N, Davallo M. Synthesis, Characterization and Antibacterial Activity of Novel 1,3-Diethyl-1,3-bis(4-nitrophenyl)urea and Its Metal(II) Complexes. Molecules. 2017;22: pubmed publisher
    ..bacteria (Bacillus subtilis and Staphylococcus aureus) and two Gram-negative bacteria (Escherichia coli and Serratia marcescens) and compared to the standard drugs...
  77. Li Z, Song Q, Wang Y, Xiao X, Xu J. Identification of a functional toxin-antitoxin system located in the genomic island PYG1 of piezophilic hyperthermophilic archaeon Pyrococcus yayanosii. Extremophiles. 2018;22:347-357 pubmed publisher
    ..In Escherichia coli, overexpression of the toxin gene pygT inhibited its growth while the toxic effect can be suppressed by ..
  78. Faoro R, Bassu M, Mejia Y, Stephan T, Dudani N, Boeker C, et al. Aberration-corrected cryoimmersion light microscopy. Proc Natl Acad Sci U S A. 2018;115:1204-1209 pubmed publisher
    ..demonstrate the range of potential applications, we show that our method can provide superior contrast in Escherichia coli and yeast cells expressing fluorescent proteins and resolve submicrometer structures in multicolor ..
  79. Zhou Y, Zhu X, Hou H, Lu Y, Yu J, Mao L, et al. Characteristics of diarrheagenic Escherichia coli among children under 5 years of age with acute diarrhea: a hospital based study. BMC Infect Dis. 2018;18:63 pubmed publisher
    ..Among bacterial agents, diarrheagenic Escherichia coli (DEC) is the major causal agent of childhood diarrhea in developing countries, particularly in children under ..
  80. De Angelis G, Fiori B, Menchinelli G, D Inzeo T, Liotti F, Morandotti G, et al. Incidence and antimicrobial resistance trends in bloodstream infections caused by ESKAPE and Escherichia coli at a large teaching hospital in Rome, a 9-year analysis (2007-2015). Eur J Clin Microbiol Infect Dis. 2018;37:1627-1636 pubmed publisher
    The proportion of antimicrobial resistance (AMR) among the ESKAPE and Escherichia coli (ESKAPEEc) pathogens causing bloodstream infection (BSI) increased worldwide...
  81. Lee M, Jun S, Yoon B, Song S, Lee K, Ha N. Membrane fusion proteins of type I secretion system and tripartite efflux pumps share a binding motif for TolC in gram-negative bacteria. PLoS ONE. 2012;7:e40460 pubmed publisher
    The Hly translocator complex of Escherichia coli catalyzes type I secretion of the toxin hemolysin A (HlyA)...
  82. Song X, Qiu H, Xiao X, Cheng Y, Li W, Sheng G, et al. Determination of autoinducer-2 in biological samples by high-performance liquid chromatography with fluorescence detection using pre-column derivatization. J Chromatogr A. 2014;1361:162-8 pubmed publisher
    ..0 ng/ml. Furthermore, the effectiveness of this approach was further validated through measuring the AI-2 concentrations in the cell-free culture supernatants of both Escherichia coli and Vibrio harveyi.
  83. Kuley E, Ozogul F, Ozogul Y, Akyol I. The function of lactic acid bacteria and brine solutions on biogenic amine formation by foodborne pathogens in trout fillets. Food Chem. 2011;129:1211-6 pubmed publisher
    ..of lactic acid bacteria and brine solutions on the biogenic amine formation by Staphylococcus aureus, Escherichia coli, Klebsiella pneumoniae, Enterococus faecalis, Pseudomonas aeruginosa, Listeria monocytogenes, Aeromonas ..
  84. Morgan J, Ortiz J, Riordan J. The role for TolA in enterohemorrhagic Escherichia coli pathogenesis and virulence gene transcription. Microb Pathog. 2014;77:42-52 pubmed publisher
    Loss of the periplasm spanning protein TolA in Escherichia coli leads to activation of the Rcs phosphorelay, and is required for full virulence in Gram-negative pathogens such as Salmonella enterica and Dickeya dadantii...
  85. Root Bernstein M, Root Bernstein R. The ribosome as a missing link in the evolution of life. J Theor Biol. 2015;367:130-58 pubmed publisher
    ..that the entire set of transfer RNAs for all twenty amino acids are encoded in both the 16S and 23S rRNAs of Escherichia coli K12; that nucleotide sequences that could encode key fragments of ribosomal proteins, polymerases, ligases, ..
  86. Naqvi A, Fordham J, Nares S. miR-24, miR-30b, and miR-142-3p regulate phagocytosis in myeloid inflammatory cells. J Immunol. 2015;194:1916-27 pubmed publisher
    ..miR-142-3p in human monocyte-derived Mφ, DC, monocytes, and PBMCs significantly attenuate phagocytosis of Escherichia coli and Staphylococcus aureus, as well as the secretion of inflammatory mediators, including TNF-α, IL-6, and ..
  87. Patel A, Patel A, Shah M, Parikh I, Joshi C. Isolation and characterization of novel multifunctional recombinant family 26 glycoside hydrolase from Mehsani buffalo rumen metagenome. Biotechnol Appl Biochem. 2016;63:257-65 pubmed publisher
    ..The recombinant GH26-histidine tag fusion protein was expressed in Escherichia coli and purified using Ni-NTA affinity chromatography...
  88. Tessaro L, Murugan N, Persinger M. Bacterial growth rates are influenced by cellular characteristics of individual species when immersed in electromagnetic fields. Microbiol Res. 2015;172:26-33 pubmed publisher
    ..field increased the rates of growth of three species (Staphylococcus epidermidis, Staphylococcus aureus, and Escherichia coli), while slowing the growth of one (Serratia marcescens)...
  89. Stateva S, Salas V, Benaim G, Menéndez M, Solís D, Villalobo A. Characterization of phospho-(tyrosine)-mimetic calmodulin mutants. PLoS ONE. 2015;10:e0120798 pubmed publisher
    ..some physicochemical properties of these CaM mutants as compared to wild type CaM, after their expression in Escherichia coli and purification to homogeneity, including: i) changes in their electrophoretic mobility in the absence and ..
  90. Zhang L, Liu X, Li X, Chen S. Expression of the N2 fixation gene operon of Paenibacillus sp. WLY78 under the control of the T7 promoter in Escherichia coli BL21. Biotechnol Lett. 2015;37:1999-2004 pubmed publisher
    ..WLY78 under the control of the T7 promoter in Escherichia coli BL21 under different conditions...
  91. Oliver D, Porter K, Heathwaite A, Zhang T, Quilliam R. Impact of low intensity summer rainfall on E. coli-discharge event dynamics with reference to sample acquisition and storage. Environ Monit Assess. 2015;187:426 pubmed publisher
    ..We sought to investigate the impact of low intensity summer rainfall on Escherichia coli-discharge (Q) patterns at the headwater catchment scale in order to provide new empirical data on FIO ..
  92. Zhang J, Ieong K, Johansson M, Ehrenberg M. Accuracy of initial codon selection by aminoacyl-tRNAs on the mRNA-programmed bacterial ribosome. Proc Natl Acad Sci U S A. 2015;112:9602-7 pubmed publisher
    We used a cell-free system with pure Escherichia coli components to study initial codon selection of aminoacyl-tRNAs in ternary complex with elongation factor Tu and GTP on messenger RNA-programmed ribosomes...