Agrobacterium tumefaciens

Summary

Alias: Agrobacterium tumefaciens (TI PLASMID PTI15955), Agrobacterium tumefaciens (TI PLASMID PTIA6NC), Agrobacterium tumefaciens (TI PLASMID PTIACH5), Agrobacterium tumefaciens (TI PLASMID PTIBO542), Agrobacterium tumefaciens (TI PLASMID PTIC58), Agrobacterium tumefaciens (TI PLASMID PTIT37), Agrobacterium tumefaciens (TI PLASMID PTITM-4), Agrobacterium tumefaciens (Ti plasmid pTib6s3), Rhizobium radiobacter, Alcaligenes radiobacter, "Alcaligenes radiobacter" (Beijerinck and van Delden 1902) Conn 1939, Bacillus radiobacter, Bacterium radiobacter, Bacterium tumefaciens, Phytomonas tumefaciens, Polymonas tumefaciens, Pseudomonas radiobacter, Pseudomonas tumefaciens, Rhizobium radiobacter (Beijerinck and van Delden 1902) Young et al. 2001, "Achromobacter radiobacter" (Beijerinck and van Delden 1902) Bergey et al. 1934, "Bacillus radiobacter" Beijerinck and van Delden 1902, "Bacterium radiobacter" (Beijerinck and van Delden 1902) Lohnis 1905, Agrobacterium radiobacter, "Bacterium tumefaciens" Smith and Townsend 1907, "Phytomonas tumefaciens" (Smith and Townsend 1907) Bergey et al. 1923, Achromobacter radiobacter, "Rhizobium radiobacter" (Beijerinck and van Delden 1902) Pribram 1933, "Pseudomonas tumefaciens" (Smith and Townsend 1907) Duggar 1909, "Pseudomonas radiobacter" (Beijerinck and van Delden 1902) Krasil'nikov 1949, "Polymonas tumefaciens" (Smith and Townsend 1907) Lieske 1928, Agrobacterium tumefacien, Agrobacterium genomosp. 4, Agrobacterium genomovar 4, Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn 1942 (Approved Lists) emend. Sawada et, Agrobacterium sp. ISSDS-827, Agrobacterium tumefaciens (Smith and Townsend 1907) Conn 1942 (Approved Lists 1980), Rhizobium sp. ISSDS-758

Top Publications

  1. Yildirim A, Karakaş F, Turker A. In vitro antibacterial and antitumor activities of some medicinal plant extracts, growing in Turkey. Asian Pac J Trop Med. 2013;6:616-24 pubmed publisher
    ..pneumoniae) by using disc diffusion method. Antitumor activity was evaluated with Agrobacterium tumefaciens (A. tumefaciens)-induced potato disc tumor assay...
  2. Jiang L, Li D, Shang P, Sun T, Xiao X. [Preliminary analyses on bacterial diversity and resistance in infection-related skin disorders]. Zhonghua Yi Xue Za Zhi. 2015;95:1762-4 pubmed
    ..lwoffii, Pseudomonas aeruginosa, Enterobacter cloacae, Rhizobium radiobacter, Sphingomonas paucimobilis, Enterococcus faecalis, Neisseria sicca and Neisseria gonorrhoeae...
  3. Pillonetto M, Arend L, Gomes S, Oliveira M, Timm L, Martins A, et al. Molecular investigation of isolates from a multistate polymicrobial outbreak associated with contaminated total parenteral nutrition in Brazil. BMC Infect Dis. 2018;18:397 pubmed publisher
    ..states: 45 from blood, 25 from TPN and three from CG, originally identified as Acinetobacter baumannii, Rhizobium radiobacter, Pantoea sp. or Enterobacteriaceae using molecular methods...
  4. León García E, Vela Gutiérrez G, Del Angel Coronel O, Torres Palacios C, La Cruz Medina J, Gómez Lim M, et al. Increased Postharvest Life of TomLox B Silenced Mutants of Tomato (Solanum lycopersicum) Var. TA234. Plant Foods Hum Nutr. 2017;72:380-387 pubmed publisher
    ..In order to increase postharvest life, we produced transgenic tomato plants via Rhizobium radiobacter with tomato lipoxygenase B (TomloxB) antisense constructs under control of the cauliflower mosaic virus (..
  5. Iyer R, Iken B, Damania A, Krieger J. Whole genome analysis of six organophosphate-degrading rhizobacteria reveals putative agrochemical degradation enzymes with broad substrate specificity. Environ Sci Pollut Res Int. 2018;25:13660-13675 pubmed publisher
    ..anthropi (FRAF13), Stenotrophomonas maltophilia (CBF10-1), Achromobacter xylosoxidans (ADAF13), and Rhizobium radiobacter (GHKF11)...
  6. Toda E, Koiso N, Takebayashi A, Ichikawa M, Kiba T, Osakabe K, et al. An efficient DNA- and selectable-marker-free genome-editing system using zygotes in rice. Nat Plants. 2019;: pubmed publisher
    ..a Cas9-guide RNA (gRNA) expression cassette and selectable marker are integrated into the genomic DNA by Agrobacterium tumefaciens-mediated transformation or particle bombardment3, CRISPR-Cas9 integration increases the ..
  7. Al Huqail A, Behiry S, Salem M, Ali H, Siddiqui M, Salem A. Antifungal, Antibacterial, and Antioxidant Activities of Acacia Saligna (Labill.) H. L. Wendl. Flower Extract: HPLC Analysis of Phenolic and Flavonoid Compounds. Molecules. 2019;24: pubmed publisher
    ..Antibacterial evaluation of the extract was assayed against four phytopathogenic bacteria, including Agrobacterium tumefaciens, Enterobacter cloacae, Erwinia amylovora, and Pectobacterium carotovorum subsp...
  8. Li L, Ma F, Zuo H. Production of a novel bioflocculant and its flocculation performance in aluminum removal. Bioengineered. 2016;7:98-105 pubmed publisher
    A novel bioflocculant CBF with high flocculating activity, produced by mixed culture of Rhizobium radiobacter F2 and Bacillus sphaericus F6 from soil, was investigated with regard to its production and flocculation performance in Al(III) ..
  9. Deepika K, Raghuram M, Kariali E, Bramhachari P. Biological responses of symbiotic Rhizobium radiobacter strain VBCK1062 to the arsenic contaminated rhizosphere soils of mung bean. Ecotoxicol Environ Saf. 2016;134P1:1-10 pubmed publisher

More Information

Publications261 found, 100 shown here

  1. Grison C, Jackson S, Merlot S, Dobson A, Grison C. Rhizobium metallidurans sp. nov., a symbiotic heavy metal resistant bacterium isolated from the Anthyllis vulneraria Zn-hyperaccumulator. Int J Syst Evol Microbiol. 2015;65:1525-30 pubmed publisher
    ..mesoamericanum CCGE 52(T), Rhizobium grahamii CCGE 502(T), Rhizobium etli CCBAU 85039(T) and Rhizobium radiobacter KL09-16-8-2(T) were 27, 22, 16, 18, 19 and 11%, respectively...
  2. Youseif S, Abd El Megeed F, Ageez A, Cocking E, Saleh S. Phylogenetic multilocus sequence analysis of native rhizobia nodulating faba bean (Vicia faba L.) in Egypt. Syst Appl Microbiol. 2014;37:560-9 pubmed publisher
    ..b>Agrobacterium tumefaciens)...
  3. Stämmler F, Gläsner J, Hiergeist A, Holler E, Weber D, Oefner P, et al. Adjusting microbiome profiles for differences in microbial load by spike-in bacteria. Microbiome. 2016;4:28 pubmed publisher
    ..of pooled faecal samples from mice containing defined amounts of the spike-in bacteria Salinibacter ruber, Rhizobium radiobacter and Alicyclobacillus acidiphilus, we demonstrate that spike-in-based calibration to microbial loads allows ..
  4. Toh e A, Ohkusu M, Shimizu K, Ishiwada N, Watanabe A, Kamei K. Novel biosynthetic pathway for sulfur amino acids in Cryptococcus neoformans. Curr Genet. 2018;64:681-696 pubmed publisher
    ..neoformans. By genetic analysis of Met- mutants obtained by Agrobacterium tumefaciens-mediated mutagenesis, we concluded that Cnc01220, most similar to Str2p (36% identity), cystathionine-?-..
  5. de Souza E, Bassani V, Sperotto R, Granada C. Inoculation of new rhizobial isolates improve nutrient uptake and growth of bean (Phaseolus vulgaris) and arugula (Eruca sativa). J Sci Food Agric. 2016;96:3446-53 pubmed publisher
    ..Under laboratory conditions, rhizobia isolates E15 (Rhizobium leguminosarum) and L5 (Rhizobium radiobacter) increase germination percentage, length, and dry weight of common bean and arugula (Eruca sativa) ..
  6. Ito M, Morino M, Krulwich T. Mrp Antiporters Have Important Roles in Diverse Bacteria and Archaea. Front Microbiol. 2017;8:2325 pubmed publisher
    ..bile salt tolerance in Bacillus subtilis and Vibrio cholerae, arsenic oxidation in Agrobacterium tumefaciens, pathogenesis in Pseudomonas aeruginosa and Staphylococcus aureus, and the conversion ..
  7. Halas R, Jacob C, Badwal K, Mir R. Rare case of Rhizobium radiobacter bioprosthetic mitral valve endocarditis. IDCases. 2017;10:88-90 pubmed publisher
    i>Rhizobium radiobacter is an aerobic, gram negative, rod-shaped, bacterium typically found in the soil. Commonly a plant pathogen, it is also a rare human pathogen causing serious disease...
  8. Ianiri G, Boyce K, Idnurm A. Isolation of conditional mutations in genes essential for viability of Cryptococcus neoformans. Curr Genet. 2017;63:519-530 pubmed publisher
    ..describes a forward genetics method to identify essential genes in fungi, based on the propensity for Agrobacterium tumefaciens to insert T-DNA molecules into the promoters or 5' untranslated regions of genes and by placing a ..
  9. Oksińska M, Magnucka E, Lejcuś K, Pietr S. Biodegradation of the cross-linked copolymer of acrylamide and potassium acrylate by soil bacteria. Environ Sci Pollut Res Int. 2016;23:5969-77 pubmed publisher
    ..8 g has decreased by 24.40 %. Moreover, the 5 g of SAP dry mass has declined by 31.70 %. Two bacteria, Rhizobium radiobacter 28SG and Bacillus aryabhattai 31SG isolated from the watered SAP were found to be able to biodegrade this ..
  10. Fan Z, Yu H, Guo Q, He D, Xue B, Xie X, et al. Identification and characterization of an anti-oxidative stress-associated mutant of Aspergillus fumigatus transformed by Agrobacterium tumefaciens. Mol Med Rep. 2016;13:2367-76 pubmed publisher
    ..fumigatus, mediated by Agrobacterium tumefaciens. In addition, a high throughput hydrogen peroxide screening system was established to examine ~1,000 ..
  11. Verástegui Valdés M, Zhang Y, Rivera Orduña F, Cheng H, Sui X, Wang E. Microsymbionts of Phaseolus vulgaris in acid and alkaline soils of Mexico. Syst Appl Microbiol. 2014;37:605-12 pubmed publisher
    ..mediterranense and Rhizobium radiobacter. The isolates of "R. leguminosarum" and E...
  12. Stanfield R, De Castro C, Marzaioli A, Wilson I, Pantophlet R. Crystal structure of the HIV neutralizing antibody 2G12 in complex with a bacterial oligosaccharide analog of mammalian oligomannose. Glycobiology. 2015;25:412-9 pubmed publisher
    ..HIV neutralizing antibody (2G12) in complex with the carbohydrate backbone of the lipooligosaccharide from Rhizobium radiobacter strain Rv3, which exhibits a chemical structure that naturally mimics the core high-mannose carbohydrate ..
  13. Yoshida M, Yoshida Takashima Y, Nunoura T, Takai K. Genomic characterization of a temperate phage of the psychrotolerant deep-sea bacterium Aurantimonas sp. Extremophiles. 2015;19:49-58 pubmed publisher
    ..the marine psychrotolerant Aureimonas ureilytica DSM 18598 genome and the temperate phage RR-1A infecting Rhizobium radiobacter P007 isolated from deep subseafloor sediment...
  14. Wang Y, Yang Y, Ma F, Xuan L, Xu Y, Huo H, et al. Optimization of Chlorella vulgaris and bioflocculant-producing bacteria co-culture: enhancing microalgae harvesting and lipid content. Lett Appl Microbiol. 2015;60:497-503 pubmed publisher
    ..vulgaris) and bioflocculant-producing bacteria (F2, Rhizobium radiobacter) in synthetic wastewater using response surface methodology, aiming to enhance C...
  15. Sawhney S, Naab T, Oneal P. Rhizobium Radiobacter Infection in a 27-Year-Old African American Woman With Munchausen Syndrome. Lab Med. 2016;47:e32-4 pubmed publisher
    b>Rhizobium radiobacter is an opportunistic, usually saprophytic, gram-negative bacillus found in agricultural soil...
  16. Davod J, Fatemeh D, Honari H, Hosseini R. Constructing and transient expression of a gene cassette containing edible vaccine elements and shigellosis, anthrax and cholera recombinant antigens in tomato. Mol Biol Rep. 2018;45:2237-2246 pubmed publisher
    ..of Shigellosis, Anthrax and Cholera antigens, agro-infiltrated tomato tissues were inoculated with Agrobacterium tumefaciens containing the gene cassette...
  17. Martínez F, Arif A, Nebauer S, Bueso E, Ali R, Montesinos C, et al. A fungal transcription factor gene is expressed in plants from its own promoter and improves drought tolerance. Planta. 2015;242:39-52 pubmed publisher
    ..or by the Arabidopsis UBQ10 promoter, was introduced into the model plant Arabidopsis thaliana by Agrobacterium tumefaciens-mediated transformation and the resulting transgenic plants were more tolerant to drought than controls...
  18. Döhlemann J, Brennecke M, Becker A. Cloning-free genome engineering in Sinorhizobium meliloti advances applications of Cre/loxP site-specific recombination. J Biotechnol. 2016;233:160-70 pubmed publisher
    ..meliloti. Furthermore, we devise a novel cloning-free genome editing (CFGE) method for S. meliloti, Agrobacterium tumefaciens and Xanthomonas campestris, and demonstrate the applicability of this method for intricate applications ..
  19. Sauvêtre A, May R, Harpaintner R, Poschenrieder C, Schroder P. Metabolism of carbamazepine in plant roots and endophytic rhizobacteria isolated from Phragmites australis. J Hazard Mater. 2018;342:85-95 pubmed publisher
    ..Higher removal rates were observed when HRs were inoculated with the endophytic bacteria Rhizobium radiobacter (21%) and Diaphorobacter nitroreducens (10%)...
  20. Miyazaki R, Yamazaki T, Yoshimatsu K, Kojima K, Asano R, Sode K, et al. Elucidation of the intra- and inter-molecular electron transfer pathways of glucoside 3-dehydrogenase. Bioelectrochemistry. 2018;122:115-122 pubmed publisher
    ..In this study, we isolated the G3DH gene from Rhizobium radiobacter, a homologue of marine bacterial G3DH, and reported that the isolated gene fragment contains the genes ..
  21. Al Abdullah A, Al Falah M, Al Rashaed S, Khandekar R, Arevalo J. Endophthalmitis Caused by Rhizobium radiobacter After Posterior Chamber Phakic Intraocular Lens Implantation to Correct Myopia. J Refract Surg. 2015;31:561-3 pubmed publisher
    ..This case represents the first case report of endophthalmitis caused by Rhizobium radiobacter following implantable collamer lens implantation.
  22. Hayes M, Bochinsky K, Seibt L, Elling L, Pietruszka J. Development of a colourimetric assay for glycosynthases. J Biotechnol. 2017;257:162-170 pubmed publisher
    ..demonstrated by the biochemical characterisation of the mesophilic β-glucosynthase of Abg-E358S (Rhizobium radiobacter) and psychrotolerant β-glucosynthase BglU-E377A (Micrococcus antarcticus)...
  23. Klee S, Mostafa I, Chen S, Dufresne C, Lehman B, Sinn J, et al. An Erwinia amylovora yjeK mutant exhibits reduced virulence, increased chemical sensitivity, and numerous environmentally dependent proteomic alterations. Mol Plant Pathol. 2017;: pubmed publisher
    ..and YjeK have been shown to be essential for full virulence of Escherichia coli, Salmonella species, and Agrobacterium tumefaciens, with efp, yjeA, and yjeK mutants having highly similar phenotypes. Here, we identified an E...
  24. Huang Q, Wang Y, Li B, Chang J, Chen M, Li K, et al. TaNAC29, a NAC transcription factor from wheat, enhances salt and drought tolerance in transgenic Arabidopsis. BMC Plant Biol. 2015;15:268 pubmed publisher
    ..TaNAC29 was introduced into Arabidopsis using the Agrobacterium tumefaciens-mediated floral dipping method...
  25. Dhar K, Wendisch V, Nampoothiri K. Engineering of Corynebacterium glutamicum for xylitol production from lignocellulosic pentose sugars. J Biotechnol. 2016;230:63-71 pubmed publisher
    ..araA), d-psicose 3 epimerase (dpe) and l-xylulose reductase (lxr) genes from Escherichia coli, Agrobacterium tumefaciens and Mycobacterium smegmatis, respectively...
  26. Zhang Y, Blaby Haas C, Steimle S, Veríssimo A, García Angulo V, Koch H, et al. Cu Transport by the Extended Family of CcoA-like Transporters (CalT) in Proteobacteria. Sci Rep. 2019;9:1208 pubmed publisher
    ..genes was examined, and three of such genes from Ochrobactrum anthropi, Rhodopseudomonas palustris and Agrobacterium tumefaciens were expressed in Escherichia coli (ΔribB) and Rhodobacter capsulatus (ΔccoA) mutants...
  27. Dmowski M, Gołebiewski M, Kern Zdanowicz I. Characteristics of the Conjugative Transfer System of the IncM Plasmid pCTX-M3 and Identification of Its Putative Regulators. J Bacteriol. 2018;200: pubmed publisher
    ..host range of the pCTX-M3 replicon by finding that this replicon is unable to support replication in Agrobacterium tumefaciens, Ralstonia eutropha, and Pseudomonas putida, though its conjugation system is capable ..
  28. Zhang Y, Lee C, Wehner N, Imdahl F, Svetlana V, Weiste C, et al. Regulation of oncogene expression in T-DNA-transformed host plant cells. PLoS Pathog. 2015;11:e1004620 pubmed publisher
    Virulent Agrobacterium tumefaciens strains integrate their T-DNA into the plant genome where the encoded agrobacterial oncogenes are expressed and cause crown gall disease...
  29. Fang F, Lin Y, Pierce B, Lynn D. A Rhizobium radiobacter Histidine Kinase Can Employ Both Boolean AND and OR Logic Gates to Initiate Pathogenesis. Chembiochem. 2015;16:2183-90 pubmed publisher
    ..Pathogenesis by the bacterium Rhizobium radiobacter is mediated by a single histidine kinase, VirA, which processes multiple small molecule host signals (..
  30. Wang C, Lu G, Hao Y, Guo H, Guo Y, Zhao J, et al. ABP9, a maize bZIP transcription factor, enhances tolerance to salt and drought in transgenic cotton. Planta. 2017;246:453-469 pubmed publisher
    ..cultivar R15 by Agrobacterium tumefaciens-mediated transformation, and 12 independent transgenic cotton lines were obtained...
  31. Yu M, Yu J, Hu J, Huang L, Wang Y, Yin X, et al. Identification of pathogenicity-related genes in the rice pathogen Ustilaginoidea virens through random insertional mutagenesis. Fungal Genet Biol. 2015;76:10-9 pubmed publisher
    b>Agrobacterium tumefaciens-mediated transformation (ATMT) is becoming a popular effective system as an insertional mutagenesis tool in filamentous fungi...
  32. Kiselevsky D, Frolova O, Solovyev A, Dorokhov Y, Morozov S, Samuilov V. Plant cell death caused by fungal, bacterial, and viral elicitors: protective effect of mitochondria-targeted quinones. Biochemistry (Mosc). 2014;79:1322-32 pubmed publisher
    ..containing the N gene responsible for resistance to tobacco mosaic virus (TMV) were infiltrated with Agrobacterium tumefaciens cells...
  33. Feng Y, Kumar R, Ravcheev D, Zhang H. Paracoccus denitrificans possesses two BioR homologs having a role in regulation of biotin metabolism. Microbiologyopen. 2015;4:644-59 pubmed publisher
    ..species of α-proteobacteria, including the zoonotic agent Brucella melitensis and the plant pathogen Agrobacterium tumefaciens. However, the scenario is unusual in Paracoccus denitrificans, another closely related member of the ..
  34. Yadav R, Mehrotra M, Singh A, Niranjan A, Singh R, Sanyal I, et al. Improvement in Agrobacterium-mediated transformation of chickpea (Cicer arietinum L.) by the inhibition of polyphenolics released during wounding of cotyledonary node explants. Protoplasma. 2017;254:253-269 pubmed publisher
    ..node explants (CNs), which release phenolics upon excision that are detrimental to the viability of Agrobacterium tumefaciens and result in low transformation frequency...
  35. Gordon J, Christie P. The Agrobacterium Ti Plasmids. Microbiol Spectr. 2014;2: pubmed publisher
    b>Agrobacterium tumefaciens is a plant pathogen with the capacity to deliver a segment of oncogenic DNA carried on a large plasmid called the tumor-inducing or Ti plasmid to susceptible plant cells. A...
  36. Zhang Y, Liu Z, Yang R, Li G, Guo X, Zhang H, et al. Improvement of soybean transformation via Agrobacterium tumefaciens methods involving α-aminooxyacetic acid and sonication treatments enlightened by gene expression profile analysis. Plant Cell Rep. 2016;35:1259-71 pubmed publisher
    ..All these factors benefit the transformation process; other measures should also be further explored to improve soybean transformation. ..
  37. Sen S, Dutta S. A potent bidirectional promoter from the monocot cereal Eleusine coracana. Phytochemistry. 2016;129:24-35 pubmed publisher
    ..for plant expression containing the reporter genes at two ends of EcBDP, which was used to transform Agrobacterium tumefaciens LBA 4404...
  38. Rikihisa Y. Role and Function of the Type IV Secretion System in Anaplasma and Ehrlichia Species. Curr Top Microbiol Immunol. 2017;413:297-321 pubmed publisher
    ..the type IV secretion system (T4SS), which is homologous to the VirB/VirD4 system of the plant pathogen Agrobacterium tumefaciens, have been expanded and are highly expressed in A. phagocytophilum and E. chaffeensis in human cells...
  39. Dubarry N, Willis C, Ball G, Lesterlin C, Armitage J. In Vivo Imaging of the Segregation of the 2 Chromosomes and the Cell Division Proteins of Rhodobacter sphaeroides Reveals an Unexpected Role for MipZ. MBio. 2019;10: pubmed publisher
    ..of chromosome duplication and segregation resembles that of Vibrio cholerae, not that of Agrobacterium tumefaciens, with duplication of the origin and terminus regions of chromosome 2 controlled by chromosome 1...
  40. Guan Q, Takano T, Liu S. Genetic transformation and analysis of rice OsAPx2 gene in Medicago sativa. PLoS ONE. 2012;7:e41233 pubmed publisher
    ..plants transformed with the OsAPx2 gene using Agrobacterium tumefaciens, as indicated by specific primer PCR...
  41. Zhang J, Tang X, Zhang M, Nguyen D, Moore B. Broad-Host-Range Expression Reveals Native and Host Regulatory Elements That Influence Heterologous Antibiotic Production in Gram-Negative Bacteria. MBio. 2017;8: pubmed publisher
    ..2ta16 revealed robust production in two proteobacterial hosts, Pseudomonas putida KT2440 and Agrobacterium tumefaciens LBA4404, but very little production of the antibiotic in various laboratory strains of ..
  42. Kyndt T, Quispe D, Zhai H, Jarret R, Ghislain M, Liu Q, et al. The genome of cultivated sweet potato contains Agrobacterium T-DNAs with expressed genes: An example of a naturally transgenic food crop. Proc Natl Acad Sci U S A. 2015;112:5844-9 pubmed publisher
    Agrobacterium rhizogenes and Agrobacterium tumefaciens are plant pathogenic bacteria capable of transferring DNA fragments [transfer DNA (T-DNA)] bearing functional genes into the host plant genome...
  43. Lee Y, Kim Y, Lee J, Yu H, Lee K, Jin S, et al. TatC-dependent translocation of pyoverdine is responsible for the microbial growth suppression. J Microbiol. 2016;54:122-30 pubmed publisher
    ..of bacterial strains such as Corynebacterium glutamicum, Bacillus subtilis, Staphylococcus aureus, and Agrobacterium tumefaciens, but had little effect on the growth of Escherichia coli and Salmonella Typhimurium...
  44. Howell M, Daniel J, Brown P. Live Cell Fluorescence Microscopy to Observe Essential Processes During Microbial Cell Growth. J Vis Exp. 2017;: pubmed publisher
    ..target-specific labeling, and time-lapse microscopy are provided for the bacterial plant pathogen Agrobacterium tumefaciens. Together, target-specific dyes and time-lapse microscopy enable characterization of essential processes ..
  45. Mohari B, Licata N, Kysela D, Merritt P, Mukhopadhay S, Brun Y, et al. Novel pseudotaxis mechanisms improve migration of straight-swimming bacterial mutants through a porous environment. MBio. 2015;6:e00005 pubmed publisher
    ..novel mechanisms of pseudotaxis have been identified for the plant-pathogenic alphaproteobacterium Agrobacterium tumefaciens. Mutants with chemotaxis mutation suppressor (cms) mutations that impart enhanced migration in motility ..
  46. Liu Y, Koh C, Yap S, Du M, Hlaing M, Ji L. Identification of novel genes in the carotenogenic and oleaginous yeast Rhodotorula toruloides through genome-wide insertional mutagenesis. BMC Microbiol. 2018;18:14 pubmed publisher
    ..We have adapted Agrobacterium tumefaciens-mediated transformation (ATMT) as a gene-tagging tool for the identification of novel genes in R...
  47. El Hefny M, Ashmawy N, Salem M, Salem A. Antibacterial activities of the phytochemicals-characterized extracts of Callistemon viminalis, Eucalyptus camaldulensis and Conyza dioscoridis against the growth of some phytopathogenic bacteria. Microb Pathog. 2017;113:348-356 pubmed publisher
    ..carotovorum, Ralstonia solanacearum, Dickeya spp. and Agrobacterium tumefaciens. The acetone (AcE) and n-butanol (ButE) extracts of Callistemon viminalis flowers and essential oil from ..
  48. Ding T, Li T, Li J. Identification of natural product compounds as quorum sensing inhibitors in Pseudomonas fluorescens P07 through virtual screening. Bioorg Med Chem. 2018;26:4088-4099 pubmed publisher
    ..score greater than 6 were purchased and tested by biosensor strains (Chromobacterium violaceum CV026 and Agrobacterium tumefaciens A136). The results showed that 10 of the compounds were determined as hits (hit rate: 66.67%)...
  49. Sheshukova E, Komarova T, Pozdyshev D, Ershova N, Shindyapina A, Tashlitsky V, et al. The Intergenic Interplay between Aldose 1-Epimerase-Like Protein and Pectin Methylesterase in Abiotic and Biotic Stress Control. Front Plant Sci. 2017;8:1646 pubmed publisher
    ..of PME in the cell wall and a decrease in the leaf glucose level, creating unfavorable conditions for Agrobacterium tumefaciens reproduction in injected leaves...
  50. Elmer J, Christensen M, Rege K. Applying horizontal gene transfer phenomena to enhance non-viral gene therapy. J Control Release. 2013;172:246-257 pubmed publisher
    ..Plant genetic engineering is routinely performed with the pathogenic bacterium Agrobacterium tumefaciens and similar pathogens (e.g. Bartonella henselae) may also be able to transform human cells...
  51. Van Eck J, Swartwood K. Setaria viridis. Methods Mol Biol. 2015;1223:57-67 pubmed publisher
    ..In this chapter, we describe methods for Agrobacterium tumefaciens-mediated transformation of seed-derived callus...
  52. Ghosh P, Sen S, Chakraborty J, Das S. Monitoring the efficacy of mutated Allium sativum leaf lectin in transgenic rice against Rhizoctonia solani. BMC Biotechnol. 2016;16:24 pubmed publisher
    ..It was expressed in an elite indica rice cv. IR64 by employing Agrobacterium tumefaciens-mediated transformation...
  53. Krishnan S, Priya A, Ramesh M. Rapid regeneration and ploidy stability of 'cv IR36' indica rice (Oryza Sativa. L) confers efficient protocol for in vitro callus organogenesis and Agrobacterium tumefaciens mediated transformation. Bot Stud. 2013;54:47 pubmed publisher
    ..development of an efficient and reproducible micropropagation system via somatic embryogenesis and Agrobacterium tumefaciens mediated transformation is prerequisite to develop abiotic stress tolerant IR36...
  54. Lin J, Ma L, Lai E. Systematic dissection of the agrobacterium type VI secretion system reveals machinery and secreted components for subcomplex formation. PLoS ONE. 2013;8:e67647 pubmed publisher
    ..and secreted components and investigate the interaction among the putative sheath and tube components of Agrobacterium tumefaciens. We showed that 14 T6SS components play essential roles in the secretion of the T6SS hallmark exoprotein ..
  55. Wally O, Punja Z. Carrot (Daucus carota L.). Methods Mol Biol. 2015;1224:59-66 pubmed publisher
    ..5-1.0 cm long) from aseptically grown carrot seedlings are exposed to Agrobacterium tumefaciens strain LBA4404 for 10-30 min and cocultivated for 2-3 days...
  56. Sinharoy S, Pislariu C, Udvardi M. A high-throughput RNA interference (RNAi)-based approach using hairy roots for the study of plant-rhizobia interactions. Methods Mol Biol. 2015;1287:159-78 pubmed publisher
    ..Legumes are often recalcitrant to regeneration and transformation by Agrobacterium tumefaciens; however, A...
  57. Kaikavoosi K, Kad T, Zanan R, Nadaf A. 2-Acetyl-1-pyrroline augmentation in scented indica rice (Oryza sativa L.) varieties through Δ(1)-pyrroline-5-carboxylate synthetase (P5CS) gene transformation. Appl Biochem Biotechnol. 2015;177:1466-79 pubmed publisher
    ..Two scented indica rice varieties, namely Ambemohar 157 and Indrayani, were subjected to Agrobacterium tumefaciens-mediated genetic transformation containing P5CS gene...
  58. Matthysse A. Exopolysaccharides of Agrobacterium tumefaciens. Curr Top Microbiol Immunol. 2018;418:111-141 pubmed publisher
    ..These are cyclic-β-(1, 2)-glucan, cellulose, curdlan, succinoglycan, and the unipolar polysaccharide (UPP). This chapter describes the structure, synthesis, regulation, and function of these five exopolysaccharides. ..
  59. Wang L, Cao Z, Hou L, Yin L, Wang D, Gao Q, et al. The opposite roles of agdA and glaA on citric acid production in Aspergillus niger. Appl Microbiol Biotechnol. 2016;100:5791-803 pubmed publisher
    ..niger CGMCC 10142 genome using Agrobacterium tumefaciens-mediated transformation. The transformants A...
  60. Cho H, Chou H. Thermodynamically optimal whole-genome tiling microarray design and validation. BMC Res Notes. 2016;9:305 pubmed publisher
    ..This new design method was used to create two whole-genome tiling microarrays for Escherichia coli MG1655 and Agrobacterium tumefaciens C58 and the experiment results validated the design.
  61. Wang S, Boevink P, Welsh L, Zhang R, Whisson S, Birch P. Delivery of cytoplasmic and apoplastic effectors from Phytophthora infestans haustoria by distinct secretion pathways. New Phytol. 2017;216:205-215 pubmed publisher
    ..We used transient Agrobacterium tumefaciens-mediated in planta expression, transformation of P...
  62. Aoyama T, Hirayama T, Tamamoto S, Oka A. Putative start codon TTG for the regulatory protein VirG of the hairy-root-inducing plasmid pRiA4. Gene. 1989;78:173-8 pubmed
    ..The TTG codon preceded by an SD sequence and a T signal is also conserved in the virG sequences from other three tumor-inducing plasmids previously reported. ..
  63. Morel P, Powell B, Rogowsky P, Kado C. Characterization of the virA virulence gene of the nopaline plasmid, pTiC58, of Agrobacterium tumefaciens. Mol Microbiol. 1989;3:1237-46 pubmed
    ..8 kilobase fragment encompassing the virA locus of the nopaline-type plasmid, pTiC58, of Agrobacterium tumefaciens. virA is composed of a single open reading frame of 2499 nucleotides, capable of encoding a protein of ..
  64. Ge Y, Wang Z. Tall fescue (Festuca arundinacea Schreb.). Methods Mol Biol. 2015;1224:365-72 pubmed publisher
    ..a protocol that allows for the generation of a large number of transgenic tall fescue plants by Agrobacterium tumefaciens-mediated transformation...
  65. Hudzieczek V, Cegan R, Cermak T, Bacovska N, Machalkova Z, Dolezal K, et al. Agrobacterium rhizogenes-mediated transformation of a dioecious plant model Silene latifolia. N Biotechnol. 2019;48:20-28 pubmed publisher
    ..latifolia is considered recalcitrant to in vitro regeneration and infection with Agrobacterium tumefaciens. Using cytokinins and their synthetic derivatives, we markedly improved the efficiency of regeneration...
  66. Gürel F, Uçarlı C, Tufan F, Kalaskar D. Enhancing T-DNA Transfer Efficiency in Barley (Hordeum vulgare L.) Cells Using Extracellular Cellulose and Lectin. Appl Biochem Biotechnol. 2015;176:1203-16 pubmed publisher
    A major limitation of transforming barley tissues by Agrobacterium tumefaciens is the low frequency of T-DNA transfer due to recalcitrance of barley as a host...
  67. Leclercq J, Szabolcs T, Martin F, Montoro P. Development of a new pCAMBIA binary vector using Gateway® technology. Plasmid. 2015;81:50-4 pubmed publisher
    ..and stable transformation experiments were successfully assayed, either by particle bombardment or by Agrobacterium tumefaciens in Allium cepa and Hevea embryogenic calli...
  68. Qi X, Su X, Guo H, Qi J, Cheng H. A ku70 null mutant improves gene targeting frequency in the fungal pathogen Verticillium dahliae. World J Microbiol Biotechnol. 2015;31:1889-97 pubmed
    ..A V. dahliae 991 ΔVdku70 null mutant strain was generated using Agrobacterium tumefaciens-mediated transformation...
  69. Nelson M, Chun C, Sadowsky M. Type IV Effector Proteins Involved in the Medicago-Sinorhizobium Symbiosis. Mol Plant Microbe Interact. 2017;30:28-34 pubmed publisher
    ..Sinorhizobium meliloti and S. medicae each contain a putative T4SS similar to that used by Agrobacterium tumefaciens during pathogenesis...
  70. Chiang C, Chen C, Chen S, Lin K, Chen L, Su Y, et al. Overexpression of the ascorbate peroxidase gene from eggplant and sponge gourd enhances flood tolerance in transgenic Arabidopsis. J Plant Res. 2017;130:373-386 pubmed publisher
    ..study, the SmAPX and LcAPX genes were transferred under a ubiquitin promoter to Arabidopsis (At) via Agrobacterium tumefaciens. The expression and amount of APX and APX activities of the SmAPX and LcAPX transgenic lines were ..
  71. Frikha Dammak D, Zarai Z, Najah S, Abdennabi R, Belbahri L, Rateb M, et al. Antagonistic Properties of Some Halophilic Thermoactinomycetes Isolated from Superficial Sediment of a Solar Saltern and Production of Cyclic Antimicrobial Peptides by the Novel Isolate Paludifilum halophilum. Biomed Res Int. 2017;2017:1205258 pubmed publisher
    ..that the crude extract from SMBg3 strain had inhibitory effect on the growth of the plant pathogen Agrobacterium tumefaciens and the human pathogens Staphylococcus aureus, Salmonella enterica, Escherichia coli, and ..
  72. Radonic L, Lewi D, López N, Hopp H, Escandón A, Bilbao M. Sunflower (Helianthus annuus L.). Methods Mol Biol. 2015;1224:47-55 pubmed publisher
    ..we describe a routine transformation system of this crop which requires mature HA89 genotype seeds and Agrobacterium tumefaciens EHA105 strain for gene delivery, being both easily available...
  73. Hršelová H, Hujslová M, Gryndler M. Genetic transformation of extremophilic fungi Acidea extrema and Acidothrix acidophila. Folia Microbiol (Praha). 2015;60:365-71 pubmed publisher
    ..The transformation procedure was based on the DNA transfer mediated by Agrobacterium tumefaciens bearing disarmed helper plasmid pMP90 and binary vector pCambia1300 with inserted DNA fragment of ..
  74. Dietz Pfeilstetter A, Arndt N, Manske U. Effects of a petunia scaffold/matrix attachment region on copy number dependency and stability of transgene expression in Nicotiana tabacum. Transgenic Res. 2016;25:149-62 pubmed publisher
    ..attachment region from petunia (Petun-SAR), was introduced in Nicotiana tabacum plants by Agrobacterium tumefaciens mediated transformation...
  75. Aliyu A, Koorbanally N, Moodley B, Singh P, Chenia H. Quorum sensing inhibitory potential and molecular docking studies of sesquiterpene lactones from Vernonia blumeoides. Phytochemistry. 2016;126:23-33 pubmed publisher
    ..violaceum and Agrobacterium tumefaciens biosensor systems...
  76. Hnatuszko Konka K, Łuchniak P, Wiktorek Smagur A, Gerszberg A, Kowalczyk T, Gatkowska J, et al. The pharmaceutics from the foreign empire: the molecular pharming of the prokaryotic staphylokinase in Arabidopsis thaliana plants. World J Microbiol Biotechnol. 2016;32:113 pubmed publisher
    ..The engineered binary vector pATAG-sak was introduced into Arabidopsis thaliana plants via Agrobacterium tumefaciens-mediated transformation...
  77. Zhang Y, Qu H, Zhao P, Tang Y, Zhou J, Luo S, et al. Generation and Screening of T-DNA Insertion Mutants Mediated by Agrobacterium tumefaciens in the Garden Asparagus Stem Blight Pathogen Phomopsis asparagi. Curr Microbiol. 2017;74:1270-1277 pubmed publisher
    ..asparagi, here we developed a highly efficient and stable Agrobacterium tumefaciens-mediated transformation approach which yielded 150-200 transformants per 1 × 106 conidia...
  78. Li Y, Christie P. The Agrobacterium VirB/VirD4 T4SS: Mechanism and Architecture Defined Through In Vivo Mutagenesis and Chimeric Systems. Curr Top Microbiol Immunol. 2018;418:233-260 pubmed publisher
    The Agrobacterium tumefaciens VirB/VirD4 translocation machine is a member of a superfamily of translocators designated as type IV secretion systems (T4SSs) that function in many species of gram-negative and gram-positive bacteria...
  79. Danne L, Aktas M, Gleichenhagen J, Grund N, Wagner D, Schwalbe H, et al. Membrane-binding mechanism of a bacterial phospholipid N-methyltransferase. Mol Microbiol. 2015;95:313-31 pubmed publisher
    ..lipid phosphatidylcholine (PC) is crucial for stress adaptation and virulence of the plant pathogen Agrobacterium tumefaciens. The phospholipid N-methyltransferase PmtA catalyzes three successive methylations of ..
  80. Grangeon R, Zupan J, Anderson Furgeson J, Zambryski P. PopZ identifies the new pole, and PodJ identifies the old pole during polar growth in Agrobacterium tumefaciens. Proc Natl Acad Sci U S A. 2015;112:11666-71 pubmed publisher
    b>Agrobacterium tumefaciens elongates by addition of peptidoglycan (PG) only at the pole created by cell division, the growth pole, whereas the opposite pole, the old pole, is inactive for PG synthesis...
  81. Schäper S, Krol E, Skotnicka D, Kaever V, Hilker R, Søgaard Andersen L, et al. Cyclic Di-GMP Regulates Multiple Cellular Functions in the Symbiotic Alphaproteobacterium Sinorhizobium meliloti. J Bacteriol. 2016;198:521-35 pubmed publisher
    ..The SMc01790-SMc01796 locus, homologous to the Agrobacterium tumefaciens uppABCDEF cluster governing biosynthesis of a unipolarly localized polysaccharide, was found to be ..
  82. Samorodova A, Tvorogova V, Tkachenko A, Potsenkovskaya E, Lebedeva М, Tikhonovich I, et al. Agrobacterial tumors interfere with nodulation and demonstrate the expression of nodulation-induced CLE genes in pea. J Plant Physiol. 2018;221:94-100 pubmed publisher
    ..Recently, we found that WOX5 homolog in pea is also expressed in nodules and in tumors induced by Agrobacterium tumefaciens. Based on this, we hypothesized that both nodules and agrobacterial tumors may be regulated by and may ..
  83. Takabatake R, Kagiya Y, Minegishi Y, Yeasmin S, Futo S, Noguchi A, et al. Development and evaluation of rapid screening detection methods for genetically modified crops using loop-mediated isothermal amplification. Food Chem. 2018;252:390-396 pubmed publisher
    ..sequences: cauliflower mosaic virus 35S promoter; 5-enolpyruvylshikimate-3-phosphate synthase gene from Agrobacterium tumefaciens strain CP4 (cp4epsps); phosphinothricin acetyltransferase (pat) gene; mannose-6-phosphate isomerase gene;..
  84. Loyola Vargas V, Ochoa Alejo N. An Introduction to Plant Tissue Culture: Advances and Perspectives. Methods Mol Biol. 2018;1815:3-13 pubmed publisher
    ..New technologies, such as the genome editing ones combined with tissue culture and Agrobacterium tumefaciens infection, are currently promising alternatives for the highly specific genetic manipulation of ..
  85. Wang Q, Warelow T, Kang Y, Romano C, Osborne T, Lehr C, et al. Arsenite oxidase also functions as an antimonite oxidase. Appl Environ Microbiol. 2015;81:1959-65 pubmed publisher
    ..Previous work with Agrobacterium tumefaciens strain 5A concluded that oxidation of antimonite [Sb(III)] and arsenite [As(III)] required different ..
  86. Esher S, Granek J, Alspaugh J. Rapid mapping of insertional mutations to probe cell wall regulation in Cryptococcus neoformans. Fungal Genet Biol. 2015;82:9-21 pubmed publisher
    ..Investigators in fungal systems have used the plant pathogen Agrobacterium tumefaciens to create tagged, random mutations for genetic screens in their fungal species of interest through a ..
  87. Petrovicheva A, Joyner J, Muth T. Quantification of Agrobacterium tumefaciens C58 attachment to Arabidopsis thaliana roots. FEMS Microbiol Lett. 2017;364: pubmed publisher
    b>Agrobacterium tumefaciens is the causal agent of crown gall disease and is a vector for DNA transfer in transgenic plants. The transformation process by A...
  88. Gan H, Savka M. One More Decade of Agrobacterium Taxonomy. Curr Top Microbiol Immunol. 2018;418:1-14 pubmed publisher
    ..An updated genome-based phylogeny of ninety-seven Agrobacterium tumefaciens complex isolates representing ten known genomic species is presented, providing additional support to ..
  89. Yepes L, Cieniewicz E, Krenz B, McLane H, Thompson J, Perry K, et al. Causative Role of Grapevine Red Blotch Virus in Red Blotch Disease. Phytopathology. 2018;: pubmed publisher
    ..clones were engineered from the genome of each of the two previously identified phylogenetic clades for Agrobacterium tumefaciens-mediated inoculations of tissue culture-grown Vitis spp. plants...
  90. Ribeiro Neto L, Oliveira A, Lourenço M, Bertoni B, França S, Rosa Santos T, et al. Improving plant transformation using Agrobacterium tumefaciens. Genet Mol Res. 2015;14:6695-8 pubmed publisher
    Here, we report a quick and low-cost method to improve plant transformation using Agrobacterium tumefaciens. This method involves the use of physical wounding, ultrasound, and an increase in exposure time to the bacteria...
  91. Park C, Park C, Shin K, Oh D. Production of d-psicose from d-fructose by whole recombinant cells with high-level expression of d-psicose 3-epimerase from Agrobacterium tumefaciens. J Biosci Bioeng. 2016;121:186-90 pubmed publisher
    ..coli cells expressing the double-site variant (I33L-S213C) d-psicose 3-epimerase (DPEase) from Agrobacterium tumefaciens was highest at 24 h of cultivation time in Terrific Broth (TB) medium among the media tested...
  92. Liu J, Ma G, Chen T, Hou Y, Yang S, Zhang K, et al. Nicotine-degrading microorganisms and their potential applications. Appl Microbiol Biotechnol. 2015;99:3775-85 pubmed publisher
    ..nicotinovorans, Agrobacterium tumefaciens S33, Aspergillus oryzae, and Pseudomonas putida S16...