Experts and Doctors on halobacterium in Berlin, Germany


Locale: Berlin, Germany
Topic: halobacterium

Top Publications

  1. Schulz Trieglaff O, Hussong R, Gröpl C, Leinenbach A, Hildebrandt A, Huber C, et al. Computational quantification of peptides from LC-MS data. J Comput Biol. 2008;15:685-704 pubmed publisher
    ..Finally, we compare the performance of our method to several other techniques on three data sets of varying complexity. ..
  2. Scholzen T, Arndt E. The alpha-operon equivalent genome region in the extreme halophilic archaebacterium Haloarcula (Halobacterium) marismortui. J Biol Chem. 1992;267:12123-30 pubmed
    ..The primary structure of HmaRp alpha shows high similarity to a subunit of eukaryotic RNA polymerase II (YeaRpB3, HsaRpB33), whereas the similarity to the eubacterial alpha-subunit of RNA polymerase is only weak. ..
  3. Arndt E, Kimura M. Molecular cloning and nucleotide sequence of the gene for the ribosomal protein S11 from the archaebacterium Halobacterium marismortui. J Biol Chem. 1988;263:16063-8 pubmed
    ..Northern blotting analysis using the S11 coding region as probe has shown that the S11 gene is located on a 2.4-kilobase mRNA, suggesting that it is cotranscribed with other downstream gene(s). ..
  4. Dijk J, van den Broek R, Nasiulas G, Beck A, Reinhardt R, Wittmann Liebold B. The N-terminal sequence of ribosomal protein L10 from the archaebacterium Halobacterium marismortui and its relationship to eubacterial protein L6 and other ribosomal proteins. Biol Chem Hoppe Seyler. 1987;368:921-5 pubmed
    ..Furthermore, several potential cases of homology to other ribosomal components of the three ur-kingdoms have been found. ..
  5. Engemann S, Herfurth E, Briesemeister U, Wittmann Liebold B. Amino acid sequence of the ribosomal protein HS23 from the halophilic Haloarcula marismortui and homology studies to other ribosomal proteins. J Protein Chem. 1995;14:189-95 pubmed
    ..04. Homology studies reveal similarities to the eukaryotic ribosomal protein S8 from Homo sapiens, Rattus norvegicus, Leishmania major, and Saccharomyces cerevisiae. ..
  6. Arndt E, Scholzen T, Kromer W, Hatakeyama T, Kimura M. Primary structures of ribosomal proteins from the archaebacterium Halobacterium marismortui and the eubacterium Bacillus stearothermophilus. Biochimie. 1991;73:657-68 pubmed
    ..Some proteins are highly conserved with 64-76% identity, others are poorly conserved with only 25-34% identical amino acid residues. ..
  7. Arndt E, Kr mer W, Hatakeyama T. Organization and nucleotide sequence of a gene cluster coding for eight ribosomal proteins in the archaebacterium Halobacterium marismortui. J Biol Chem. 1990;265:3034-9 pubmed
    ..A putative promoter is located upstream of orf1. Out of the eight ribosomal proteins five have counterparts in eubacteria only, two in both eubacteria and eukaryotes, and one is exclusively related to an eukaryotic ribosomal protein...
  8. Walsh M, McDougall J, Wittmann Liebold B. Extended N-terminal sequencing of proteins of archaebacterial ribosomes blotted from two-dimensional gels onto glass fiber and poly(vinylidene difluoride) membrane. Biochemistry. 1988;27:6867-76 pubmed
  9. Arndt E. The genes for ribosomal protein L15 and the protein equivalent to secY in the archaebacterium Haloarcula (Halobacterium) marismortui. Biochim Biophys Acta. 1992;1130:113-6 pubmed
    ..The gene order of the halobacterial gene cluster is similar to that in the methanogens and in eubacteria. ..

More Information


  1. Bergmann U, Arndt E. Evidence for an additional archaebacterial gene cluster in Halobacterium marismortui encoding ribosomal proteins HL46e and HL30. Biochim Biophys Acta. 1990;1050:56-60 pubmed
    ..An equivalent to this HL46e/HL30 operon is apparently not present in Escherichia coli. ..
  2. Arndt E, Weigel C. Nucleotide sequence of the genes encoding the L11, L1, L10 and L12 equivalent ribosomal proteins from the archaebacterium Halobacterium marismortui. Nucleic Acids Res. 1990;18:1285 pubmed
  3. Köpke A, Baier G, Wittmann Liebold B. An archaebacterial gene from Methanococcus vannielii encoding a protein homologous to the ribosomal protein L10 family. FEBS Lett. 1989;247:167-72 pubmed
    ..This is not the case for the E. coli proteins but was also observed for the human, Halobacterium and Sulfolobus proteins. ..
  4. Kimura M, Kimura J, Hatakeyama T. Amino acid sequences of ribosomal proteins S11 from Bacillus stearothermophilus and S19 from Halobacterium marismortui. Comparison of the ribosomal protein S11 family. FEBS Lett. 1988;240:15-20 pubmed
    ..The halophilic protein S19 is more related to the eukaryotic (45-49%) than to the eubacterial counterparts (35%). ..
  5. Engemann S, Noelle R, Herfurth E, Briesemeister U, Grelle G, Wittmann Liebold B. Cartography of ribosomal proteins of the 30S subunit from the halophilic Haloarcula marismortui and complete sequence analysis of protein HS26. Eur J Biochem. 1995;234:24-31 pubmed
    ..marismortui. Therefore, it seems to be unlikely that this protein is a real constituent of the H. marismortui ribosome. ..