Experts and Doctors on molecular sequence data in Nanjing, Jiangsu, China


Locale: Nanjing, Jiangsu, China
Topic: molecular sequence data

Top Publications

  1. Qin M, Huang Y, Yang G, Xu L, Zhou K. [RbcL sequence analysis of Belamcanda chinensis and related medicinal plants of Iris]. Yao Xue Xue Bao. 2003;38:147-52 pubmed
    ..DC.] and relative medicinal plants of Iris including Iris tectorum Maxim., I. dichotoma Pall., I. germanica L. and I. japonica Thunb. by ribulose 1,5-bisphosphate carboxylase Large Gene (rbcL) sequence analysis...
  2. Huang J, Zhang H, Wang J, Yang J. Molecular cloning and characterization of rice 6-phosphogluconate dehydrogenase gene that is up-regulated by salt stress. Mol Biol Rep. 2003;30:223-7 pubmed
    ..Furthermore, Os6PGDH was up-regulated in the shoots under salt stress. It is suggested that 6PGDH in plant may play an important role in cell division and salt response. ..
  3. Dong H, Peng J, Bao Z, Meng X, Bonasera J, Chen G, et al. Downstream divergence of the ethylene signaling pathway for harpin-stimulated Arabidopsis growth and insect defense. Plant Physiol. 2004;136:3628-38 pubmed
    ..Therefore, harpin activates ET signaling while conscribing EIN2 and EIN5 to confer IR and PGE, respectively. ..
  4. Weng H, Yang L, Liu Z, Ding J, Pan A, Zhang D. Novel reference gene, High-mobility-group protein I/Y, used in qualitative and real-time quantitative polymerase chain reaction detection of transgenic rapeseed cultivars. J AOAC Int. 2005;88:577-84 pubmed
    ..These demonstrated that the endogenous PCR detection systems were applicable to the qualitative and quantitative detection of transgenic rapeseed. ..
  5. Miao K, Pan Q, Xue M, Zhou X, Fei X, Tang Y, et al. A novel HLA allele, DRB1*1609, identified in the Chinese Han population*. Tissue Antigens. 2005;66:248-50 pubmed
    ..SBT was performed for cloned DRB1*16-specific polymerase chain reaction fragment. The serological phenotype of DRB1*1609 is equivalent to DR16 antigen. ..
  6. Cao Q, Chen J, Zhu L, Liu Y, Zhou Z, Sha J, et al. A testis-specific and testis developmentally regulated tumor protein D52 (TPD52)-like protein TPD52L3/hD55 interacts with TPD52 family proteins. Biochem Biophys Res Commun. 2006;344:798-806 pubmed
    ..6-fold higher levels in adult testis than in fetal testis. Additionally, the expression profile shows that hD55 is testis-specific, indicating a potential role for hD55 in testis development and spermatogenesis. ..
  7. Wang C, Li P, Ding J, Peng X, Yuan C. Simultaneous identification of Bulbus Fritillariae cirrhosae using PCR-RFLP analysis. Phytomedicine. 2007;14:628-32 pubmed
  8. Liu Y, Liu J, Chen J, Cheng L, Cao Q, Zhu L, et al. Molecular cloning and characterization of a novel splice variant of the LIM domain family gene, PINCH 2, in human testis. Mol Biotechnol. 2007;35:109-18 pubmed
    ..These results suggest that PINCH 2, a novel LIM domain-containing gene, may play an important role in testicular development/spermatogenesis. ..
  9. Dong X, Sun Q, Wei D, Li J, Li J, Tang B, et al. A novel ferritin gene, SferH-5, reveals heterogeneity of the 26.5-kDa subunit of soybean (Glycine max) seed ferritin. FEBS Lett. 2007;581:5796-802 pubmed publisher
    ..Recombinant H-5 was able to assemble, together with co-expressed H-2, as a functional soybean seed ferritin-like complex, H-5/H-2. Our data reveal the potential heterogeneity of the 26.5-kDa subunit of soybean seed ferritin...

More Information

Publications207 found, 100 shown here

  1. Huang J, Wang M, Bao Y, Sun S, Pan L, Zhang H. SRWD: a novel WD40 protein subfamily regulated by salt stress in rice (OryzasativaL.). Gene. 2008;424:71-9 pubmed publisher
    ..Our study correlates WD40 proteins with salt stress in plants and provides fundamental information for the further investigation of plant SRWD proteins...
  2. Sun Y, Cao A, Yang X, Wang X, Chen P. [Screening hv-S/TPK from TAC library of a Triticum aestivum-Haynaldia villosa translocation line]. Sheng Wu Gong Cheng Xue Bao. 2008;24:1327-32 pubmed
    ..The result of fluorescence in situ hybridization (FISH) indicated that the TAC clone containing Hv-S/TPK was from Haynaldia villosa chromosome. ..
  3. Qiu J, Gao C, Zhang M, Chen R, Chi X, Liu F, et al. LYRM1, a novel gene promotes proliferation and inhibits apoptosis of preadipocytes. Eur J Endocrinol. 2009;160:177-84 pubmed publisher
    ..By increasing cell proliferation and lowering the rate of apoptosis, LYRM1 has the potential to modulate the size of the preadipocyte pool and influence adipose tissue homeostasis. ..
  4. Wu X, Liu N, He Y, Chen Y. Cloning, expression, and characterization of a novel diketoreductase from Acinetobacter baylyi. Acta Biochim Biophys Sin (Shanghai). 2009;41:163-70 pubmed
    ..More importantly, based on the unique catalytic activity and excellent stereoselectivity, the DKR could be utilized in the synthesis of valuable chiral drug intermediates, such as Lipitor. ..
  5. Li H, Xing P, Chen M, Bian Y, Wu Q. Short-term bacterial community composition dynamics in response to accumulation and breakdown of Microcystis blooms. Water Res. 2011;45:1702-10 pubmed publisher
  6. Fu G, Xu S, Xie Y, Han B, Nie L, Shen W, et al. Molecular cloning, characterization, and expression of an alfalfa (Medicago sativa L.) heme oxygenase-1 gene, MsHO1, which is pro-oxidants-regulated. Plant Physiol Biochem. 2011;49:792-9 pubmed publisher
    ..In conclusion, MsHO1 may play an important role in oxidative responses...
  7. Liu Z, Li Q, Pan Z, Qu X, Zhang C, Xie Z. Comparative analysis on mRNA expression level and methylation status of DAZL gene between cattle-yaks and their parents. Anim Reprod Sci. 2011;126:258-64 pubmed publisher
    ..01). We propose that the methylation of DAZL gene plays an important role in DAZL transcriptional regulation and maybe have a severe effect on spermatogenesis and male sterility in cattle-yaks. ..
  8. Li B, Fang L, Guo X, Gao J, Song T, Bi J, et al. Epidemiology and evolutionary characteristics of the porcine reproductive and respiratory syndrome virus in China between 2006 and 2010. J Clin Microbiol. 2011;49:3175-83 pubmed publisher
    ..Information from this study will help in understanding the evolutionary characteristics of Chinese PRRSV and assist ongoing efforts to develop and use PRRSV vaccines in the future...
  9. Wang K, Fan W, Cai L, Huang B, Lu C. Genetic analysis of the capsular polysaccharide synthesis locus in 15 Streptococcus suis serotypes. FEMS Microbiol Lett. 2011;324:117-24 pubmed publisher
    ..The characteristics of the CPS synthesis locus suggest that some genes may have been imported into S. suis (or their ancestors) on multiple occasions from different and unknown sources. ..
  10. Dong S, Yin W, Kong G, Yang X, Qutob D, Chen Q, et al. Phytophthora sojae avirulence effector Avr3b is a secreted NADH and ADP-ribose pyrophosphorylase that modulates plant immunity. PLoS Pathog. 2011;7:e1002353 pubmed publisher
    ..Avr3b homologues are present in several sequenced Phytophthora genomes, suggesting that Phytophthora pathogens might share similar strategies to suppress plant immunity. ..
  11. Wang X, Guo L, Shangguan L, Wang C, Yang G, Qu S, et al. Analysis of expressed sequence tags from grapevine flower and fruit and development of simple sequence repeat markers. Mol Biol Rep. 2012;39:6825-34 pubmed publisher
    ..vinifera L, indicating that grapevine EST datasets are a valuable source for the development of functional simple sequence repeat (SSR) markers...
  12. Zhang J, Li H, Wang X, Qi H, Miao X, Zhang T, et al. Phage-derived fully human antibody scFv fragment directed against human vascular endothelial growth factor receptor 2 blocked its interaction with VEGF. Biotechnol Prog. 2012;28:981-9 pubmed publisher
    ..Taken together, our results indicate that we have successfully isolated a scFv which differentially recognizes KDR3 and has potential clinical applications in the treatment of angiogenesis related diseases. ..
  13. Xu Y, Luo Q, Zhou M. Identification and characterization of integron-mediated antibiotic resistance in the phytopathogen Xanthomonas oryzae pv. oryzae. PLoS ONE. 2013;8:e55962 pubmed publisher
    ..To our knowledge, this is the first report of resistance integron in a phytopathogenic bacteria. ..
  14. Chen C, Wang F, Wan H, Jin X, Wei J, Wang Z, et al. Amino acid polymorphisms flanking the EPIYA-A motif of Helicobacter pylori?CagA C-terminal region is associated with gastric cancer in east China: experience from a single center. J Dig Dis. 2013;14:358-65 pubmed publisher
    ..001). Most H.?pylori strains present in our study are of the CagA-ABD subtype. Polymorphisms at amino acids 878 and 879 flanking the EPIYA-A motif are statistically associated with gastric cancer. ..
  15. Shi Y, Lu J, Zhou J, Tan X, He Y, Ding J, et al. Long non-coding RNA Loc554202 regulates proliferation and migration in breast cancer cells. Biochem Biophys Res Commun. 2014;446:448-53 pubmed publisher
    ..These data suggest an important role of Loc554202 in breast tumorigenesis. ..
  16. Xu Y, Li L, Li J, Liu Q. Structural and biological function of NYD-SP15 as a new member of cytidine deaminases. Gene. 2016;583:36-47 pubmed publisher
    ..Furthermore, NYD-SP15 gene over-expression reduced the cells growth and blocked G1 to S phase, which implied a potential inhibition effect on cell growth. ..
  17. Li P, Lu X, Shao M, Long J, Wang J. Genetic diversity of harpins from Xanthomonas oryzae and their activity to induce hypersensitive response and disease resistance in tobacco. Sci China C Life Sci. 2004;47:461-9 pubmed
    ..All expressed hrf1, hrf2 and hrf3 proteins (Harpins) are shown to be able to induce hypersensitive reaction and TMV resistance on tobacco. Among the three proteins, Hrf2 has the highest activity while Hrf3 has the lowest activity. ..
  18. Ruan H, Zhang N, Gao X. Identification of a novel point mutation of mouse proto-oncogene c-kit through N-ethyl-N-nitrosourea mutagenesis. Genetics. 2005;169:819-31 pubmed
    ..Therefore, the Wads mutant may serve as a new disease model of human piebaldism, anemia, deafness, sterility, and mast cell diseases. ..
  19. Yin L, Li J, Zhou Z, Sha J. Identification of a novel testis-specific gene and its potential roles in testis development/spermatogenesis. Asian J Androl. 2005;7:127-37 pubmed
    ..NYD-SP5 is a newly found testis-specific gene with potential roles in testis development and spermatogenesis through a calmodulin-activated enzyme. ..
  20. Wang P, Zhong Z, Zhou J, Cai T, Zhu J. Exopolysaccharide biosynthesis is important for Mesorhizobium tianshanense: plant host interaction. Arch Microbiol. 2008;189:525-30 pubmed publisher
    ..EPS mutants formed significantly less biofilm and displayed severely reduced nodulation capacity than wild type bacteria, suggesting that EPS synthesis can play important roles in the symbiosis process...
  21. Peng Y, Li Y, Liu X, Zhang J, Duan J. Antitumor activity of C-21 steroidal glycosides from Cynanchum auriculatum Royle ex Wight. Phytomedicine. 2008;15:1016-20 pubmed publisher
    ..49 and 24.95 ?M, respectively. Then the in vivo assay further showed that caudatin-2,6-dideoxy-3-O-methy-?-D-cymaropyranoside and caudatin significantly inhibited the growth of transplantable H(22) tumors in mice. ..
  22. Su Y, Yao W, Perez Gutierrez O, Smidt H, Zhu W. Changes in abundance of Lactobacillus spp. and Streptococcus suis in the stomach, jejunum and ileum of piglets after weaning. FEMS Microbiol Ecol. 2008;66:546-55 pubmed publisher
    ..suis became dominant while the proportion of Lactobacillus populations decreased after weaning, which may further result in an increase of S. suis abundance in the intestine...
  23. Song C, Fang J, Li X, Liu H, Thomas Chao C. Identification and characterization of 27 conserved microRNAs in citrus. Planta. 2009;230:671-85 pubmed publisher
    ..Overall, this study in the identification and characterization of miRNAs in citrus can initiate further study on citrus miRNA regulation mechanisms, and it can help us to know more about the important roles of miRNAs in citrus. ..
  24. Jin Y, Song J, Xie Z, Gao H, Yuan X, Xu Z, et al. Prevalence and clinical characteristics of human CoV-HKU1 in children with acute respiratory tract infections in China. J Clin Virol. 2010;49:126-30 pubmed publisher
    ..HCoV-HKU1 is an uncommon virus existing among Chinese children with ARTI. Children with underlying diseases are more vulnerable to viral infection. Only HCoV-HKU1 genotype B circulated locally. ..
  25. Bao C, Guo X, Qi X, Hu J, Zhou M, Varma J, et al. A family cluster of infections by a newly recognized bunyavirus in eastern China, 2007: further evidence of person-to-person transmission. Clin Infect Dis. 2011;53:1208-14 pubmed publisher
    ..We reexamined this family cluster for SFTSV infection...
  26. Wang J, Hou X, Yang X. Identification of conserved microRNAs and their targets in Chinese cabbage (Brassica rapa subsp. pekinensis). Genome. 2011;54:1029-40 pubmed publisher
  27. Li B, Ma J, Xiao S, Zhang X, Wen L, Mao L, et al. Development of a loop-mediated isothermal amplification method for rapid detection of porcine boca-like virus. J Virol Methods. 2012;179:390-5 pubmed publisher
    ..It has capacity for the detection of Pbo-likeV both in the laboratory and on farms. ..
  28. Li H, Wang J, Wu D, Wang H, Tang N, Zhang Y. The origin and evolution of variable number tandem repeat of CLEC4M gene in the global human population. PLoS ONE. 2012;7:e30268 pubmed publisher
  29. Ge Z, Wan P, Han Z. Cloning and characterization of trypsin- and chymotrypsin-like genes in the striped rice stem borer, Chilo suppressalis. Genome. 2012;55:281-8 pubmed publisher
  30. Xue J, Wang Y, Wu P, Wang Q, Yang L, Pan X, et al. A primary survey on bryophyte species reveals two novel classes of nucleotide-binding site (NBS) genes. PLoS ONE. 2012;7:e36700 pubmed publisher
    ..The presence of specific introns highlights the chimerical structures of HNL, PNL and TNL genes, and implies their possible origin via exon-shuffling during the quick lineage separation processes of early land plants...
  31. Zeng J, Zhao D, Huang R, Wu Q. Abundance and community composition of ammonia-oxidizing archaea and bacteria in two different zones of Lake Taihu. Can J Microbiol. 2012;58:1018-26 pubmed publisher
    ..The data obtained in this study would be useful to elucidate the role of ammonia-oxidizing archaea and ammonia-oxidizing bacteria in the nitrogen cycle of freshwater ecosystems. ..
  32. Jin P, Zhou L, Song X, Qian J, Chen L, Ma F. Particularity and universality of a putative Gram-negative bacteria-binding protein (GNBP) gene from amphioxus (Branchiostoma belcheri): insights into the function and evolution of GNBP. Fish Shellfish Immunol. 2012;33:835-45 pubmed publisher
    ..In conclusion, our findings disclose the particularity and universality of AmphiGNBP and provide profound insights into the function and evolution of GNBP. ..
  33. Li Y, Hongyi W, Komatsu M, Ishibashi K, Jinsan L, Ito T, et al. Isolation and characterization of bacterial isolates algicidal against a harmful bloom-forming cyanobacterium Microcystis aeruginosa. Biocontrol Sci. 2012;17:107-14 pubmed
    ..These results suggest that the algicidal bacteria isolated in the present study are potentially useful as biocontrol agents against M. aeruginosa bloom...
  34. Yu Q, Zhu L, Lin J, Zhang Q, Tian Q, Hu W, et al. Functional analyse of GLUT1 and GLUT12 in glucose uptake in goat mammary gland epithelial cells. PLoS ONE. 2013;8:e65013 pubmed publisher
    ..This study contributes to the understanding of how GLUT1 and GLUT12 cooperate in the incorporation of nutrient uptake into mammary gland epithelial cells and the promotion of milk synthesis in the goat mammary gland during lactation. ..
  35. Shan Y, Zheng Y, Guan F, Zhou J, Zhao H, Xia B, et al. Purification and characterization of a novel anti-HSV-2 protein with antiproliferative and peroxidase activities from Stellaria media. Acta Biochim Biophys Sin (Shanghai). 2013;45:649-55 pubmed publisher
    ..6 µmol/min/mg protein, when guaiacol was used as substrate. To our knowledge, this is the first report about an anti-HSV-2 protein with antiproliferative and peroxidase activities from S. media. ..
  36. Shi H, Huang Y, Zhang Y, Li W, Li X, Wang F. High-level expression of a novel thermostable and mannose-tolerant ?-mannosidase from Thermotoga thermarum DSM 5069 in Escherichia coli. BMC Biotechnol. 2013;13:83 pubmed publisher
  37. Chen Q, Sun L, Zhang X, He J, Kwon S, Zhang J, et al. Roseomonas rhizosphaerae sp. nov., a triazophos-degrading bacterium isolated from soil. Int J Syst Evol Microbiol. 2014;64:1127-33 pubmed publisher
    ..nov. is proposed. The type strain is YW11(T) (?=?KACC 17225(T)?=?CCTCC AB2013041(T)). ..
  38. Tang Y, Lou F, Wang J, Zhuang S. Four new isoflavone triglycosides from Sophora japonica. J Nat Prod. 2001;64:1107-10 pubmed
    ..The structures of 1-4 were determined by spectroscopic methods. ..
  39. Ren X, Han Z, Wang Y. Mechanisms of monocrotophos resistance in cotton bollworm, Helicoverpa armigera (Hübner). Arch Insect Biochem Physiol. 2002;51:103-10 pubmed publisher
    ..One of them, the Ala/Thr mutation, is likely to be responsible for the AChE insensitivity to monocrotophos...
  40. Jiao R, He Q, Chen H, Hua Z, Jiao Q, Chiu J. AUF1-like protein binds specifically to DAS cis-acting element that regulates mouse alpha-fetoprotein gene expression. J Cell Biochem. 2006;98:1257-70 pubmed
    ..Our results suggest that the 30-kDa protein is a novel isoform of AUF1 family and is the main component of the DAP-II complex that binds to the DAS sequence. ..
  41. Ding J, Araki H, Wang Q, Zhang P, Yang S, Chen J, et al. Highly asymmetric rice genomes. BMC Genomics. 2007;8:154 pubmed
    ..It might be a consequence of diversifying selection that increased the structural divergence among genomes, and of purifying selection that decreased nucleotide divergence in each R gene locus. ..
  42. Du J, Wang X, Zhang M, Tian D, Yang Y. Unique nucleotide polymorphism of ankyrin gene cluster in Arabidopsis. J Genet. 2007;86:27-35 pubmed
    ..The possible mechanisms for and implications of this elevated nucleotide variation are also discussed, including the suggestion of balancing selection. ..
  43. Jia E, Wang J, Yang Z, Zhu T, Wang L, Chen B, et al. Molecular scanning of the human carboxypeptidase E gene for mutations in Chinese subjects with coronary atherosclerosis. Mol Cell Biochem. 2008;307:31-9 pubmed
    ..027). In the present study, the mutation of CPE gene would not affect the level of glucose, insulin, and proinsulin. The hypothesis of a possible role for mutations in CPE in the development of coronary heart disease needs further study. ..
  44. Yang X, Lin L, Zhang X, Ji Y, Lv J, Zhu Y, et al. Identification of a novel repressor element in the cyclo-oxygenase-2 promoter and its nuclear binding protein. Clin Exp Pharmacol Physiol. 2008;35:1204-8 pubmed publisher
    ..This provides additional data on COX-2 gene regulation and may provide an insight into the clinical treatment of diseases where COX-2 is highly expressed. ..
  45. Lin F, Zhang Y, Jiang M. Alternative splicing and differential expression of two transcripts of nicotine adenine dinucleotide phosphate oxidase B gene from Zea mays. J Integr Plant Biol. 2009;51:287-98 pubmed publisher
    ..These results provide new insight into roles in the expression regulation of plant rboh genes and suggest that ZmrbohB gene may play a role in response to environmental stresses...
  46. Guo L, Lu Z. The fate of miRNA* strand through evolutionary analysis: implication for degradation as merely carrier strand or potential regulatory molecule?. PLoS ONE. 2010;5:e11387 pubmed publisher
    ..Well-conserved miRNA* strands, particularly conservation in seed sequences, maybe afford potential opportunities for contributing to regulation network. The study will broaden our understanding of potential functional miRNA* species. ..
  47. Wang C, Wang X, Kibet N, Song C, Zhang C, Li X, et al. Deep sequencing of grapevine flower and berry short RNA library for discovery of novel microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase. Physiol Plant. 2011;143:64-81 pubmed publisher
    ..These results point to a regulatory role of miRNAs in grapevine berry development and response to various environments. ..
  48. Zhou X, Xu S, Xu J, Chen B, Zhou K, Yang G. Phylogenomic analysis resolves the interordinal relationships and rapid diversification of the laurasiatherian mammals. Syst Biol. 2012;61:150-64 pubmed publisher
    ..Our estimates were similar to those of several studies and suggest that the divergences among these orders occurred within just a few million years. ..
  49. Zhao W, Yang X, Dong S, Sheng Y, Wang Y, Zheng X. Transient silencing mediated by in vitro synthesized double-stranded RNA indicates that PsCdc14 is required for sporangial development in a soybean root rot pathogen. Sci China Life Sci. 2011;54:1143-50 pubmed publisher
    ..Furthermore, dsRNA-mediated transient gene silencing could enable elucidation of P. sojae rapid gene function, facilitating our understanding of the development and pathogenicity mechanisms of this oomycete fungus. ..
  50. Gu W, Xi B, Wu Q, Chao J, Li L, Shen X. [Cloning and distribution pattern of HMGR gene conserved fragment in Alisma orientale]. Zhong Yao Cai. 2011;34:1335-9 pubmed
    ..The HMGR gene conserved fragment from A. orientale was cloned and its distribution pattern was detected for the first time. This work provides a foundation for exploring the synthetic pathway and bioengineering of Alisma terpenes. ..
  51. Wang S, Pan Z, Zhang Q, Xie Z, Liu H, Li Q. Differential mRNA expression and promoter methylation status of SYCP3 gene in testes of yaks and cattle-yaks. Reprod Domest Anim. 2012;47:455-62 pubmed publisher
  52. Lu G, Zheng M, Zhu Y, Sha M, Wu Y, Han X. Selection of peptide inhibitor to matrix metalloproteinase-2 using phage display and its effects on pancreatic cancer cell lines PANC-1 and CFPAC-1. Int J Biol Sci. 2012;8:650-62 pubmed publisher
    ..Furthermore, these two peptides could suppress tumor growth in vivo. Our results indicated that two peptides selected by phase display technology may be used as anticancer drugs in the future. ..
  53. Yu X, Tang J, Wang Q, Ye W, Tao K, Duan S, et al. The RxLR effector Avh241 from Phytophthora sojae requires plasma membrane localization to induce plant cell death. New Phytol. 2012;196:247-60 pubmed publisher
  54. Zhu H, Xu L, Yan R, Song X, Tang F, Wang S, et al. Identification and characterization of a cDNA clone-encoding antigen of Eimeria acervulina. Parasitology. 2012;139:1711-9 pubmed publisher
    ..All the above results suggested that the cSZ-JN2 was a novel E. acervulina antigen and could be an effective candidate for the development of a new vaccine against E. acervulina infection. ..
  55. Sun L, Zhang J, Chen Q, He J, Li Q, Li S. Comamonas jiangduensis sp. nov., a biosurfactant-producing bacterium isolated from agricultural soil. Int J Syst Evol Microbiol. 2013;63:2168-73 pubmed publisher
    ..nov. is proposed. The type strain is YW1(T) (=CCTCC AB 2012033(T)=KACC 16697(T))...
  56. Sun L, Zhang J, Chen Q, He J, Li S. Sphingobacterium caeni sp. nov., isolated from activated sludge. Int J Syst Evol Microbiol. 2013;63:2260-4 pubmed publisher
    ..nov. is proposed. The type strain is DC-8(T) (=CCTCC AB 2012020(T)=KACC 16850(T))...
  57. Hou X, Tang Z, Liu H, Wang N, Ju H, Li K. Discovery of MicroRNAs associated with myogenesis by deep sequencing of serial developmental skeletal muscles in pigs. PLoS ONE. 2012;7:e52123 pubmed publisher
    ..Luciferase activities of report vectors containing the 3'UTR of porcine BMP2 or MAPK1 were downregulated by miR-378, which suggested that miR-378 probably regulated myogenesis though the regulation of these two genes. ..
  58. Zhou L, Pei L, You J, Hou H, Cheng Y, Yang D, et al. Molecular structure, expression pattern and functional characterisation of APRIL in an aquatic mammal. Int Immunopharmacol. 2013;16:171-7 pubmed publisher
    ..The results of this study contribute to our understanding of the immune mechanisms in the finless porpoise and other aquatic mammals. ..
  59. Zhang C, Li G, Wang J, Zhu S, Li H. Cascading cis-cleavage on transcript from trans-acting siRNA-producing locus 3. Int J Mol Sci. 2013;14:14689-99 pubmed publisher
    ..Part of the cascading cis-cleavages was also conserved in Arabidopsis thaliana. Our results will enhance the understanding of the production of sRNAs from non-phased positions that are not set by microRNA-directed cleavage. ..
  60. Huang J, Wang J, Zhang H, Cao Y, Lin C, Wang D, et al. [In silico cloning of glucose-6-phosphate dehydrogenase cDNA from rice (Oryza sativa L.)]. Yi Chuan Xue Bao. 2002;29:1012-6 pubmed
    ..It was also discussed in this paper that the application of in silico cloning in the isolation of functional genes from rice. ..
  61. Wang H, Huo R, Xu M, Lu L, Xu Z, Li J, et al. Cloning and characterization of a novel transcript variant of IQGAP2 in human testis. DNA Seq. 2004;15:319-25 pubmed
    ..The above results suggest the potential role of tsIQGAP2 during spermatogenesis and the mechanism by which tsIQGAP2 regulating spermatogenesis also has been proposed. ..
  62. Huang J, Wang J, Zhang H. Rice ZFP15 gene encoding for a novel C2H2-type zinc finger protein lacking DLN box, is regulated by spike development but not by abiotic stresses. Mol Biol Rep. 2005;32:177-83 pubmed publisher
    ..Besides, ZFP15 was shown to accumulate much more in flowering spike than in immature spike. Thus, ZFP15, as the first characterized C2H2-type zinc finger protein in rice, might play a regulatory role on rice spike development...
  63. Chen R, Qiu W, Liu Z, Cao X, Zhu T, Li A, et al. Identification of JWA as a novel functional gene responsive to environmental oxidative stress induced by benzo[a]pyrene and hydrogen peroxide. Free Radic Biol Med. 2007;42:1704-14 pubmed
    ..Consistently siRNA mediated a knockdown of NFI, which prevented JWA induction. These findings indicate that JWA may serve as a novel environmental stress sensor to protect cells against reactive oxygen species-associated DNA damage. ..
  64. Heuer H, Yin Y, Xue Q, Smalla K, Guo J. Repeat domain diversity of avrBs3-like genes in Ralstonia solanacearum strains and association with host preferences in the field. Appl Environ Microbiol. 2007;73:4379-84 pubmed
    ..A statistically significant association between the originating plant species and internal repeats of the gene was found. Sequences of repeats and variation between nearly clonal strains revealed evidence of frequent recombination...
  65. Fang X, Xu N, Ren S. Cloning, sequencing and identification of single nucleotide polymorphisms of partial sequence on the porcine CACNA1S gene. Sci China C Life Sci. 2008;51:317-25 pubmed publisher
    ..According to the EST of porcine CACNA1S gene published in GenBank (Bx914582, Bx666997), 8 of the 11 SNPs identified in the present study were consistent with the base difference between two EST fragments. ..
  66. Xiong H, Qian J, He T, Li F. Independent transcription of miR-281 in the intron of ODA in Drosophila melanogaster. Biochem Biophys Res Commun. 2009;378:883-9 pubmed publisher
    ..The abundance of miR-281 does not correlate, either positively or negatively, with the expression of any ODA isoform, indicating that ODA has little influence on the transcription of miR-281. ..
  67. Guo X, Li R, Zheng L, Lin D, Sun J, Li S, et al. Jeotgalicoccus huakuii sp. nov., a halotolerant bacterium isolated from seaside soil. Int J Syst Evol Microbiol. 2010;60:1307-10 pubmed publisher
    ..nov. is proposed...
  68. Wang W, Gu W, Gasparich G, Bi K, Ou J, Meng Q, et al. Spiroplasma eriocheiris sp. nov., associated with mortality in the Chinese mitten crab, Eriocheir sinensis. Int J Syst Evol Microbiol. 2011;61:703-8 pubmed publisher
    ..nov. is proposed, belonging to the novel Spiroplasma serological group XLIII. ..
  69. Li J, Liu H, Cao J, Chen L, Gu C, Allen C, et al. PopW of Ralstonia solanacearum, a new two-domain harpin targeting the plant cell wall. Mol Plant Pathol. 2010;11:371-81 pubmed publisher
    ..We conclude that PopW is a new cell wall-associated, hrpB-dependent, two-domain harpin that is conserved across the R. solanacearum species complex. ..
  70. Jiang Y, Xia N, Li X, Shen W, Liang L, Wang C, et al. Molecular cloning and characterization of a phenylalanine ammonia-lyase gene (LrPAL) from Lycoris radiata. Mol Biol Rep. 2011;38:1935-40 pubmed publisher
    ..The GAL content in leaves was significantly induced by MJ and NO, and inhibited by SA. This study enables us to further elucidate the role of LrPAL in the biosynthesis of GAL in Lycoris radiata at a molecular level...
  71. Zhou F, Wang Y, Guan Y, Xu Y, Gao X, Wu W, et al. Construction and characterization of a cDNA library from shark regenerated hepatic tissue. Fish Shellfish Immunol. 2011;30:1170-7 pubmed publisher
    ..Furthermore, the EST cataloguing and profiling of shark will be also benefited to the functional genomic research in this marine species...
  72. Cao A, Xing L, Wang X, Yang X, Wang W, Sun Y, et al. Serine/threonine kinase gene Stpk-V, a key member of powdery mildew resistance gene Pm21, confers powdery mildew resistance in wheat. Proc Natl Acad Sci U S A. 2011;108:7727-32 pubmed publisher
    ..Stpk-V could be induced by Bgt and exogenous H(2)O(2), but it also mediated the increase of endogenous H(2)O(2), leading to cell death and plant resistance when the plant was attacked by Bgt. ..
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