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Genomes and GenesSpecies | foxi1SummaryGene Symbol: foxi1 Description: forkhead box i1 Alias: cb724, foo, hearsay, hsy, no soul, nos, quadro, quo(l) Species: zebrafish Top Publications
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Publications
Epibranchial and otic placodes are induced by a common Fgf signal, but their subsequent development is independentShun Kuo Sun
Children s Brain Tumour Research Centre, Institute of Genetics, Queen s Medical Centre, University of Nottingham, Nottingham, NG7 2UH, UK
Dev Biol 303:675-86. 2007..However, the forkhead factor, Foxi1, is required for both otic and epibranchial placode development...
The forkhead transcription factor FoxI1 remains bound to condensed mitotic chromosomes and stably remodels chromatin structureJizhou Yan
National Human Genome Research Institute, Genome Technology Branch, NIH, Bldg 50, Rm 5537, 50 South Dr, Bethesda, MD 20892, USA
Mol Cell Biol 26:155-68. 2006..We created a stable cell line expressing FoxI1-green fluorescent protein (GFP) or FoxI1-V5 fusion proteins under control of the reverse tetracycline-controlled ..
FoxA3 and goosecoid promote anterior neural fate through inhibition of Wnt8a activity before the onset of gastrulationIban Seiliez
Institut de Genetique et de Biologie Moleculaire et Cellulaire, CNRS INSERM ULP, 1, rue Laurent Fries, BP10142, 67404 Illkirch Cedex, France
Dev Biol 290:152-63. 2006..Altogether, foxA3 and goosecoid cooperate to promote formation of anterior neural tissue by protecting, as early as blastula stage, presumptive anterior neural cells from an irreversible caudalization by the posteriorizing factor Wnt8a...
Zebrafish msxB, msxC and msxE function together to refine the neural-nonneural border and regulate cranial placodes and neural crest developmentBryan T Phillips
Biology Department, Texas A and M University, College Station, TX 77843 3258, USA
Dev Biol 294:376-90. 2006..These data suggest that mutual antagonism between Msx and Dlx proteins achieves a balance of function required for normal preplacodal differentiation and placement of the neural-nonneural border...
Pax8 and Pax2a function synergistically in otic specification, downstream of the Foxi1 and Dlx3b transcription factorsStefan Hans
Institute of Neuroscience, University of Oregon, Eugene, OR 97403, USA
Development 131:5091-102. 2004..further provide evidence that pax8 expression and pax2a expression are regulated by two independent factors, Foxi1 and Dlx3b, respectively. Combined loss of both factors eliminates all indications of otic specification...
Combinatorial Fgf and Bmp signalling patterns the gastrula ectoderm into prospective neural and epidermal domainsTetsuhiro Kudoh
Department of Anatomy and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK
Development 131:3581-92. 2004..We further show that Bmp signalling does occur within the vegetal prospective neural domain and that Bmp activity promotes the adoption of caudal fate by this tissue...
Fgf-dependent otic induction requires competence provided by Foxi1 and Dlx3bStefan Hans
Institute of Neuroscience, University of Oregon, Eugene, OR 97403, USA
BMC Dev Biol 7:5. 2007..We previously suggested that Foxi1 and Dlx3b may provide competence to form the ear because loss of both foxi1 and dlx3b results in ablation of all ..
Zebrafish foxi one modulates cellular responses to Fgf signaling required for the integrity of ear and jaw patterningRobert M Nissen
Center for Cancer Research and Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
Development 130:2543-54. 2003..We identified foxi one (foo), the zebrafish ortholog of Foxi1 (FREAC6, FKHL10, HFH-3, Fkh10) and a member of the forkhead domain transcriptional regulator family, as the gene ..
Zebrafish foxi1 mediates otic placode formation and jaw developmentKeely S Solomon
Department of Biology, Emory University, Atlanta, GA 30322, USA
Development 130:929-40. 2003..Here, we identify a mutation in zebrafish, hearsay, which disrupts the initiation of placode formation...
Mesendodermal signals required for otic induction: Bmp-antagonists cooperate with Fgf and can facilitate formation of ectopic otic tissueHye Joo Kwon
Biology Department, Texas A and M University, College Station, Texas, USA
Dev Dyn 238:1582-94. 2009..Developmental Dynamics 238:1582-1594, 2009. (c) 2009 Wiley-Liss, Inc...
Genetic interactions underlying otic placode induction and formationKeely S Solomon
Department of Biology, Emory University, Atlanta, Georgia, USA
Dev Dyn 230:419-33. 2004..In zebrafish, fgf3 and fgf8, dlx3b and dlx4b, and foxi1 have been identified as the earliest-acting genes in this process...
A zebrafish model for Waardenburg syndrome type IV reveals diverse roles for Sox10 in the otic vesicleKirsten Dutton
Department of Biology and Biochemistry, Centre for Regenerative Medicine, Developmental Biology Programme, University of Bath, Bath, UK
Dis Model Mech 2:68-83. 2009..We discuss the implication that the deafness in WS4 patients with SOX10 mutations might reflect a haploinsufficiency for SOX10 in the otic epithelium, resulting in patterning and functional abnormalities in the inner ear...
Mechanism of development of ionocytes rich in vacuolar-type H(+)-ATPase in the skin of zebrafish larvaeMasahiro Esaki
Department of Biological Sciences, Tokyo Institute of Technology, Midori ku, Yokohama, Japan
Dev Biol 329:116-29. 2009..In the present study, we analyzed a zebrafish mutant, quadro (quo), deficient in foxi1 gene expression and found that foxi1 is essential for development of an MRC ..
Ectodermal P2X receptor function plays a pivotal role in craniofacial development of the zebrafishSarah Kucenas
Department of Pharmacological and Physiological Science, Saint Louis University School of Medicine, 1402 S Grand Blvd, St Louis, MO, 63104, USA
Purinergic Signal 5:395-407. 2009..These data suggest that p2rx3.1 function in ectodermal cells is involved in purinergic signaling essential for proper craniofacial development and sensory circuit formation in the embryonic and larval zebrafish...
Genome wide screens in yeast to identify potential binding sites and target genes of DNA-binding proteinsJue Zeng
Division of Hematology Oncology, Department of Medicine, University of California, Irvine, CA, USA
Nucleic Acids Res 36:e8. 2008..The experimental approach was validated with the tumor suppressor protein p53 and the forkhead protein FoxI1 using genomic libraries for zebrafish and mouse generated by shotgun cloning of short genomic fragments...
Nkcc1 (Slc12a2) is required for the regulation of endolymph volume in the otic vesicle and swim bladder volume in the zebrafish larvaLeila Abbas
MRC Centre for Developmental and Biomedical Genetics and Department of Biomedical Science, University of Sheffield, Sheffield, UK
Development 136:2837-48. 2009..This exemplifies the use of morpholinos as potential therapeutic agents for genetic disease...
Zebrafish foxo3b negatively regulates canonical Wnt signaling to affect early embryogenesisXun Wei Xie
Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, People s Republic of China
PLoS ONE 6:e24469. 2011..Our studies provide an in vivo model for illustrating function of FOXO transcription factors in embryogenesis...
Pax2/8 proteins coordinate sequential induction of otic and epibranchial placodes through differential regulation of foxi1, sox3 and fgf24Mahesh S Padanad
Biology Department, Texas A and M University, College Station, TX 77843 3258, USA
Dev Biol 351:90-8. 2011..In zebrafish, both are initiated by localized Fgf signaling plus the ubiquitous competence factor Foxi1, and both express pax8 and sox3 in response...
Essential genes for astroglial development and axon pathfinding during zebrafish embryogenesisMichael J F Barresi
Biological Sciences, Smith College, Northampton, Massachusetts 01063, USA
Dev Dyn 239:2603-18. 2010..The genes disrupted in these viral lines have all been identified, providing a powerful new resource for the study of axon guidance, glio- and neurogenesis, and neuron-glial interactions during development of the vertebrate CNS...
Kctd15 inhibits neural crest formation by attenuating Wnt/beta-catenin signaling outputSunit Dutta
Laboratory of Molecular Genetics, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA
Development 137:3013-8. 2010..We propose that Kctd15 inhibits NC formation by attenuating the output of the canonical Wnt pathway, thereby restricting expansion of the NC domain beyond its normal range...
Repression of Hedgehog signalling is required for the acquisition of dorsolateral cell fates in the zebrafish otic vesicleKatherine L Hammond
MRC Centre for Developmental and Biomedical Genetics and Department of Biomedical Science, University of Sheffield, Sheffield, UK
Development 137:1361-71. 2010....
Induction and patterning of trunk and tail neural ectoderm by the homeobox gene eve1 in zebrafish embryosCarlos Cruz
School of Biosciences, University of Exeter, Devon EX4 4SP, UK
Proc Natl Acad Sci U S A 107:3564-9. 2010..We conclude that eve1 is crucial for the organization of the antero-posterior and dorso-ventral axis in the gastrula ectoderm and also has trunk- and tail-promoting activity...
Craniofacial skeletal defects of adult zebrafish Glypican 4 (knypek) mutantsElizabeth E LeClair
Department of Biological Sciences, DePaul University, Chicago, Illinois 60614, USA
Dev Dyn 238:2550-63. 2009..In contrast, gpc4(-/-) larvae never form these domains, suggesting a failure of chondrocyte orientation, though not differentiation. Our findings implicate Gpc4 in the regulation of zebrafish cartilage and bone morphogenesis...
Chordin expression, mediated by Nodal and FGF signaling, is restricted by redundant function of two beta-catenins in the zebrafish embryoMáté Varga
Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
Mech Dev 124:775-91. 2007....
Early developmental specification of the thyroid gland depends on han-expressing surrounding tissue and on FGF signalsThomas Wendl
Institute for Developmental Biology, University of Cologne, Gyrhofstrasse 17, 50923 Koln, Germany
Development 134:2871-9. 2007..FGF-soaked beads can restore thyroid development in han mutants, showing that FGFs act downstream of or in parallel to han. These data suggest that loss of FGF-expressing tissue in han mutants is responsible for the thyroid defects...
Prevalence of the EH1 Groucho interaction motif in the metazoan Fox family of transcriptional regulatorsSergey Yaklichkin
Department of Cell and Developmental Biology, University of Pennsylvania School of Medicine, 1110 Biomedical Research Building II III, 421 Curie Boulevard, Philadelphia, PA 19104, USA
BMC Genomics 8:201. 2007..Defining conserved functional domains that mediate the transcriptional activity of Fox proteins will contribute to a comprehensive understanding of the biological function of Fox family genes...
Expression and phylogenetic analyses of three zebrafish FoxI class genesKeely S Solomon
Department of Biology, Emory University, Atlanta, Georgia, USA
Dev Dyn 228:301-7. 2003..We have reported previously the identification of zebrafish foxi1, which is required for otic placode and jaw development...
Mutations affecting development of the zebrafish earJ Malicki
Cardiovascular Research Center, Massachusetts General Hospital, Charlestown 02129, USA
Development 123:275-83. 1996..Embryos mutant at the quadro locus display abnormal specification of the otic placode...
Zebrafish gcm2 is required for gill filament budding from pharyngeal ectodermBenjamin M Hogan
Ludwig Institute for Cancer Research, Royal Melbourne Hospital, Victoria 3050, Australia
Dev Biol 276:508-22. 2004..This study identifies yet another role for a GCM gene in embryonic development and indicates a role for gcm2 during the evolution of divergent pharyngeal morphologies...
Zebrafish pax8 is required for otic placode induction and plays a redundant role with Pax2 genes in the maintenance of the otic placodeMelinda D Mackereth
Department of Biology, Emory University, Atlanta, GA 30322, USA
Development 132:371-82. 2005..In contrast, the phenotype caused by disrupting foxi1, which is required for pax8 expression, was not enhanced by simultaneously disrupting pax8...
Positioning of the midbrain-hindbrain boundary organizer through global posteriorization of the neuroectoderm mediated by Wnt8 signalingMuriel Rhinn
Department of Genetics, University of Technology Dresden, c o Max Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany
Development 132:1261-72. 2005..Our findings argue that graded Wnt8 activity mediates overall neuroectodermal posteriorization and thus determines the location of the MHB organizer...
Endoderm-derived Fgf3 is necessary and sufficient for inducing neurogenesis in the epibranchial placodes in zebrafishAlexei Nechiporuk
Department of Biological Structure, University of Washington, Seattle, WA 98195 7420, USA
Development 132:3717-30. 2005..Surprisingly, ectodermal foxi1 expression, a marker for the epibranchial placode precursors, is present in both endoderm-deficient embryos and ..
Requirements for endoderm and BMP signaling in sensory neurogenesis in zebrafishJochen Holzschuh
Department of Developmental and Cell Biology, University of California, 5438 McGaugh Hall, Irvine, CA 92697 2300, USA
Development 132:3731-42. 2005..Our results show that the endoderm regulates the differentiation of cranial sensory ganglia, which coordinates the cranial nerves with the segments that they innervate...
The genetics of hearing and balance in zebrafishTeresa Nicolson
Oregon Hearing Research Center and Vollum Institute, Oregon Health and Science University, Portland, Oregon 97239, USA
Annu Rev Genet 39:9-22. 2005..This review addresses the most recent advances in our understanding of how the ear forms and discusses the molecules in hair cells that are essential for sensing sound and movement in the zebrafish...
Zebrafish endoderm formation is regulated by combinatorial Nodal, FGF and BMP signallingMorgane Poulain
National Institute for Medical Research, Division of Developmental Biology, The Ridgeway, Mill Hill, London, UK
Development 133:2189-200. 2006..These results identify a molecular mechanism whereby FGF attenuates Nodal-induced endodermal transcription factors and highlight a potential mechanism whereby mesoderm and endoderm fates could segregate from each other...
Noggin1 and Follistatin-like2 function redundantly to Chordin to antagonize BMP activitySophie Dal-Pra
Institut de Genetique et de Biologie Moleculaire et Cellulaire, UMR 7104, CNRS INSERM ULP, 1 rue Laurent Fries, BP 10142, CU de Strasbourg, 67404 Illkirch Cedex, France
Dev Biol 298:514-26. 2006....
A change in response to Bmp signalling precedes ectodermal fate choiceChris T Dee
Institute of Genetics, University of Nottingham, QMC, Nottingham, UK
Int J Dev Biol 51:79-84. 2007..Hence, we have shown a dynamic change in the molecular machinery underlying the Bmp response in the ectoderm during gastrulation stages of development...
Specification of epibranchial placodes in zebrafishAlexei Nechiporuk
Department of Biological Structure, University of Washington, Seattle, WA 98195 7420, USA
Development 134:611-23. 2007..Here, we show that zebrafish embryos mutant for fgf3 and fgf8 do not express early EB placode markers, including foxi1 and pax2a...
Changes in retinoic acid signaling alter otic patterningStefan Hans
Institute of Neuroscience, University of Oregon, Eugene, OR 97403, USA
Development 134:2449-58. 2007..Excess RA leads to ectopic foxi1 expression throughout the entire preplacodal domain. Foxi1 provides competence to adopt an otic fate...
Mutations in the zebrafish unmask shared regulatory pathways controlling the development of catecholaminergic neuronsS Guo
Department of Neuroscience, Genentech, Inc, 1 DNA Way, South San Francisco, California, 94080, USA
Dev Biol 208:473-87. 1999..The too few mutation leads to a specific reduction in the number of hypothalamic DA neurons. no soul lacks arch-associated NA cells and has defects in pharyngeal arches, and soulless lacks both arch-associated and ..
Research Grants
- Axon guidance in the developing zebrafish brainMICHAEL BARRESI; Fiscal Year: 2004..This research will lead to a better understanding of events critical to establishing neural connections across the midline in the vertebrate brain. ..
- Genetic and molecular dissection of hair-cell functionTeresa Nicolson; Fiscal Year: 2009..The data from these experiments will help to increase our understanding of the biology of deafness genes and may lead to potential therapies for deafness patients. ..
