Ismael A Vergara

Summary

Publications

  1. pmc CooVar: co-occurring variant analyzer
    Ismael A Vergara
    Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, B, C, V5A 1S6, Canada
    BMC Res Notes 5:615. 2012
  2. pmc StAR: a simple tool for the statistical comparison of ROC curves
    Ismael A Vergara
    Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, Chile
    BMC Bioinformatics 9:265. 2008
  3. pmc OrthoClusterDB: an online platform for synteny blocks
    Man Ping Ng
    Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, Canada
    BMC Bioinformatics 10:192. 2009
  4. ncbi request reprint A knowledge-based potential with an accurate description of local interactions improves discrimination between native and near-native protein conformations
    Evandro Ferrada
    Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, Chile
    Cell Biochem Biophys 49:111-24. 2007
  5. pmc Identification of novel transcripts with differential dorso-ventral expression in Xenopus gastrula using serial analysis of gene expression
    Fernando Faunes
    Center for Cell Regulation and Pathology and Center for Aging and Regeneration, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, 8331150, Chile
    Genome Biol 10:R15. 2009
  6. ncbi request reprint Autosomal STR allele frequencies for the CODIS system from a large random population sample in Chile
    Ismael A Vergara
    Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, Chile
    Forensic Sci Int Genet 6:e83-5. 2012

Detail Information

Publications6

  1. pmc CooVar: co-occurring variant analyzer
    Ismael A Vergara
    Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, B, C, V5A 1S6, Canada
    BMC Res Notes 5:615. 2012
    ....
  2. pmc StAR: a simple tool for the statistical comparison of ROC curves
    Ismael A Vergara
    Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, Chile
    BMC Bioinformatics 9:265. 2008
    ..This constitutes the typical scenario for the optimization of parameters when developing new classifiers and also for their performance validation through the comparison to previous art...
  3. pmc OrthoClusterDB: an online platform for synteny blocks
    Man Ping Ng
    Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, Canada
    BMC Bioinformatics 10:192. 2009
    ....
  4. ncbi request reprint A knowledge-based potential with an accurate description of local interactions improves discrimination between native and near-native protein conformations
    Evandro Ferrada
    Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, Chile
    Cell Biochem Biophys 49:111-24. 2007
    ..Some external knowledge-based energy functions that are widely used in model assessment performed poorly, indicating that the benchmark of models and the specific discrimination task tested in this work constitutes a difficult challenge...
  5. pmc Identification of novel transcripts with differential dorso-ventral expression in Xenopus gastrula using serial analysis of gene expression
    Fernando Faunes
    Center for Cell Regulation and Pathology and Center for Aging and Regeneration, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, 8331150, Chile
    Genome Biol 10:R15. 2009
    ..In order to identify novel transcripts involved in dorso-ventral patterning, we compared dorsal and ventral transcriptomes of Xenopus tropicalis at the gastrula stage using serial analysis of gene expression (SAGE)...
  6. ncbi request reprint Autosomal STR allele frequencies for the CODIS system from a large random population sample in Chile
    Ismael A Vergara
    Departamento de Genetica Molecular y Microbiologia, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Alameda 340, Santiago, Chile
    Forensic Sci Int Genet 6:e83-5. 2012
    ..This is the first report of allele frequencies for the thirteen STRs loci defined in the CODIS system from the Chilean population...