Xuming Xu

Summary

Affiliation: Yale University
Country: USA

Publications

  1. pmc Molecular phylogeny of the antiangiogenic and neurotrophic serpin, pigment epithelium derived factor in vertebrates
    Xuming Xu
    Department of Ophthalmology and Visual Science, Yale University School of Medicine, New Haven, CT 06520, USA
    BMC Genomics 7:248. 2006
  2. pmc A biphasic pattern of gene expression during mouse retina development
    Samuel Shao Min Zhang
    Departments of Ophthalmology and Visual Science, Yale School of Medicine, New Haven, Connecticut, USA
    BMC Dev Biol 6:48. 2006
  3. pmc Spatio-temporal transcriptome of the human brain
    Hyo Jung Kang
    Department of Neurobiology and Kavli Institute for Neuroscience, Yale University School of Medicine, New Haven, Connecticut 06510, USA
    Nature 478:483-9. 2011
  4. pmc Comprehensive in silico functional specification of mouse retina transcripts
    Samuel Shao Min Zhang
    Department of Pathology, Yale University School of Medicine, 310 Cedar Street, New Haven, CT 06520, USA
    BMC Genomics 6:40. 2005
  5. ncbi request reprint PEDF and the serpins: phylogeny, sequence conservation, and functional domains
    Joyce Tombran-Tink
    Division of Pharmaceutical Sciences, University of Missouri Kansas City, Kansas City, MO 64110, USA
    J Struct Biol 151:130-50. 2005
  6. doi request reprint Expression of ZnT and ZIP zinc transporters in the human RPE and their regulation by neurotrophic factors
    Kar Wah Leung
    Department of Neural and Behavioral Sciences, Pennsylvania State University College of Medicine, Hershey, Pennsylvania 17033, USA
    Invest Ophthalmol Vis Sci 49:1221-31. 2008

Collaborators

  • Colin J Barnstable
  • Samuel Shao Min Zhang
  • Hongyu Zhao
  • Mark Reimers
  • Feng Cheng
  • J Tombran-Tink
  • Hyo Jung Kang
  • Kar Wah Leung
  • Shrikant Mane
  • Daniel R Weinberger
  • Joel E Kleinman
  • Ying Zhu
  • Matthew B Johnson
  • Sheila Umlauf
  • Yurae Shin
  • AndrĂ© M M Sousa
  • Nenad Sestan
  • Simone Mayer
  • Goran Sedmak
  • Yuka Imamura Kawasawa
  • Mingfeng Li
  • Zeljka Krsnik
  • Alexander Vortmeyer
  • Tobias Guennel
  • Thomas M Hyde
  • Sofia Fertuzinhos
  • Mihovil Pletikos
  • Kyle A Meyer
  • Anita Huttner
  • Steven N Lisgo
  • Magdalene J Seiler
  • Mugen Liu

Detail Information

Publications6

  1. pmc Molecular phylogeny of the antiangiogenic and neurotrophic serpin, pigment epithelium derived factor in vertebrates
    Xuming Xu
    Department of Ophthalmology and Visual Science, Yale University School of Medicine, New Haven, CT 06520, USA
    BMC Genomics 7:248. 2006
    ..Defining the molecular phylogeny of PEDF by bioinformatic analysis is one approach to understanding the link between its gene structure and its function in these biological processes...
  2. pmc A biphasic pattern of gene expression during mouse retina development
    Samuel Shao Min Zhang
    Departments of Ophthalmology and Visual Science, Yale School of Medicine, New Haven, Connecticut, USA
    BMC Dev Biol 6:48. 2006
    ..We investigated expression patterns of retina transcripts during the major embryonic and postnatal developmental stages to provide a systematic view of normal mouse retina development,..
  3. pmc Spatio-temporal transcriptome of the human brain
    Hyo Jung Kang
    Department of Neurobiology and Kavli Institute for Neuroscience, Yale University School of Medicine, New Haven, Connecticut 06510, USA
    Nature 478:483-9. 2011
    ..This study provides a comprehensive data set on the human brain transcriptome and insights into the transcriptional foundations of human neurodevelopment...
  4. pmc Comprehensive in silico functional specification of mouse retina transcripts
    Samuel Shao Min Zhang
    Department of Pathology, Yale University School of Medicine, 310 Cedar Street, New Haven, CT 06520, USA
    BMC Genomics 6:40. 2005
    ..In this study, we have integrated computational bioinformatics and microarray experimental approaches to classify the tissue specificity and developmental distribution of mouse retina transcripts...
  5. ncbi request reprint PEDF and the serpins: phylogeny, sequence conservation, and functional domains
    Joyce Tombran-Tink
    Division of Pharmaceutical Sciences, University of Missouri Kansas City, Kansas City, MO 64110, USA
    J Struct Biol 151:130-50. 2005
    ..Our results suggest that secretion is required for PEDF's activity, that PEDF can migrate to the nucleus, and that PEDF has structural and functional features more common with inhibitory serpins...
  6. doi request reprint Expression of ZnT and ZIP zinc transporters in the human RPE and their regulation by neurotrophic factors
    Kar Wah Leung
    Department of Neural and Behavioral Sciences, Pennsylvania State University College of Medicine, Hershey, Pennsylvania 17033, USA
    Invest Ophthalmol Vis Sci 49:1221-31. 2008
    ..The expression and regulation of zinc transporters in the RPE and the toxicity of zinc to these cells were examined...