Research Topics
| PATRICK M SUNGSummaryAffiliation: Yale University Country: USA Publications
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Publications
Mechanism of eukaryotic homologous recombinationJoseph San Filippo
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520, USA
Annu Rev Biochem 77:229-57. 2008..Recent progress on elucidating the mechanisms of action of Rad51 and Dmc1 and their cohorts of ancillary factors is reviewed here...
Yeast recombination factor Rdh54 functionally interacts with the Rad51 recombinase and catalyzes Rad51 removal from DNAPeter Chi
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 281:26268-79. 2006..Rad51 complex formation. The Rdh54 expression and purification procedures described here should facilitate the functional dissection of this DNA recombination/repair factor...
Role of the Rad52 amino-terminal DNA binding activity in DNA strand capture in homologous recombinationIdina Shi
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 284:33275-84. 2009..These results provide evidence that DNA binding by the evolutionarily conserved amino terminus of Rad52 is needed for the capture of the second DNA end during homologous recombination...
Purification and assays of Saccharomyces cerevisiae homologous recombination proteinsStephen Van Komen
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut, USA
Methods Enzymol 408:445-63. 2006..Continuing efforts with reconstituted systems that comprise yeast factors will undoubtedly continue to provide insights into the mechanistic intricacy of the homologous recombination machinery...
Saccharomyces cerevisiae MPH1 gene, required for homologous recombination-mediated mutation avoidance, encodes a 3' to 5' DNA helicaseRohit Prakash
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 280:7854-60. 2005..These results, thus, establish Mph1 as an ATP-dependent DNA helicase, and the availability of purified Mph1 should facilitate efforts at deciphering the role of this protein in homologous recombination and mutation avoidance...
Recombination mediator and Rad51 targeting activities of a human BRCA2 polypeptideJoseph San Filippo
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 281:11649-57. 2006..The results thus clarify the role of BRCA2 in Rad51-dependent DNA recombination and repair, and the experimental strategies described herein should be valuable for systematically deciphering this BRCA2 function...
The yeast Hex3.Slx8 heterodimer is a ubiquitin ligase stimulated by substrate sumoylationYang Xie
Department of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, CT 06520 8114, USA
J Biol Chem 282:34176-84. 2007..Our data reveal a novel mechanism of substrate targeting in which sumoylation of a protein can help trigger its subsequent ubiquitination by recruiting a SUMO-binding ubiquitin ligase...
Enhancement of RAD51 recombinase activity by the tumor suppressor PALB2Eloïse Dray
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut, USA
Nat Struct Mol Biol 17:1255-9. 2010..Our results demonstrate the multifaceted role of PALB2 in chromosome damage repair. Because PALB2 mutations can cause cancer or Fanconi anemia, our findings shed light on the mechanism of tumor suppression in humans...
ATP-dependent chromatin remodeling by the Saccharomyces cerevisiae homologous recombination factor Rdh54YoungHo Kwon
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 283:10445-52. 2008..These features of Rdh54 suggest a role of this protein factor in chromatin rearrangement during DNA recombination and repair...
Hed1 regulates Rad51-mediated recombination via a novel mechanismValeria Busygina
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
Genes Dev 22:786-95. 2008..These findings shed light on the function of Hed1 and, importantly, unveil a novel mechanism for the regulation of homologous recombination...
Mechanism of the ATP-dependent DNA end-resection machinery from Saccharomyces cerevisiaeHengyao Niu
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
Nature 467:108-11. 2010..Our reconstituted system should serve as a useful model for delineating the mechanistic intricacy of the DNA break resection process in eukaryotes...
Bipartite stimulatory action of the Hop2-Mnd1 complex on the Rad51 recombinasePeter Chi
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
Genes Dev 21:1747-57. 2007..Thus, our results unveil a bipartite mechanism of Hop2-Mnd1 in homologous DNA pairing: stabilization of the Rad51 presynaptic filament and duplex DNA capture to enhance synaptic complex formation...
Role of ATP hydrolysis in the antirecombinase function of Saccharomyces cerevisiae Srs2 proteinLumir Krejci
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 279:23193-9. 2004..These results highlight the importance of the ATP hydrolysisfueled DNA motor activity in SRS2 functions...
A double Holliday junction dissolvasome comprising BLM, topoisomerase IIIalpha, and BLAP75Steven Raynard
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 281:13861-4. 2006..This function of the BLM-Topo IIIalpha-BLAP75 dissolvasome is likely indispensable for genome maintenance and cancer avoidance...
Biochemical characterization of the RECQ4 protein, mutated in Rothmund-Thomson syndromeMargaret A Macris
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, 333 Cedar St, C130 Sterling Hall of Medicine, New Haven, CT 06520 8024, USA
DNA Repair (Amst) 5:172-80. 2006..Unlike the previously characterized members of the RecQ family, RECQ4 lacks a detectable DNA helicase activity...
Meiotic recombination: an affair of two recombinasesMichael G Sehorn
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520 8024, USA
Cell Cycle 3:1375-7. 2004..The manner in which Rad51 and Dmc1 functionally cooperate in meiotic recombination remains to be determined...
Molecular anatomy of the recombination mediator function of Saccharomyces cerevisiae Rad52Changhyun Seong
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 283:12166-74. 2008..Our results provide a mechanistic framework for rationalizing the multi-faceted role of Rad52 in recombination and DNA repair...
Holliday junction processing activity of the BLM-Topo IIIalpha-BLAP75 complexWendy Bussen
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 282:31484-92. 2007....
Regulation of Rad51 recombinase presynaptic filament assembly via interactions with the Rad52 mediator and the Srs2 anti-recombinaseChanghyun Seong
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 284:24363-71. 2009..Moreover, our biochemical studies have helped identify A320V as a separation-of-function mutation in Rad51 with regards to a differential ablation of Rad52 interaction...
DNA double-strand break processing: the beginning of the endSteven Raynard
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
Genes Dev 22:2903-7. 2008..Three recent studies, including work by Jackson and colleagues (pp. 2767- 2772) in the October 15, 2008, issue of Genes & Development, have begun to shed some light on the intricacy of this process...
Human meiotic recombinase Dmc1 promotes ATP-dependent homologous DNA strand exchangeMichael G Sehorn
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, USA
Nature 429:433-7. 2004..The DNA strand exchange activity of hDmc1 is probably indispensable for repair of DNA double-strand breaks during meiosis and for maintaining the ploidy of meiotic chromosomes...
Synergistic action of the Saccharomyces cerevisiae homologous recombination factors Rad54 and Rad51 in chromatin remodelingYoungHo Kwon
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, 333 Cedar Street, New Haven, CT 06520, USA
DNA Repair (Amst) 6:1496-506. 2007..These results suggest that Rad54-mediated chromatin remodeling coincides with DNA homology search by the Rad51 presynaptic filament and that this process is facilitated by an interaction of Rad54 with histone H3...
Assay for human Rad51-mediated DNA displacement loop formationSteven Raynard
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520, USA
Cold Spring Harb Protoc 2009:pdb.prot5120. 2009..This reconstituted system provides researchers a biochemical means to dissect the mechanisms of the homologous recombination machinery...
FANCI binds branched DNA and is monoubiquitinated by UBE2T-FANCLSimonne Longerich
Department of Molecular Biophysics, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 284:23182-6. 2009..We also demonstrate that FANCI can be ubiquitinated on Lys-523 by the UBE2T-FANCL pair in vitro. These findings should facilitate future efforts directed at elucidating molecular aspects of the FA pathway...
Yeast Mph1 helicase dissociates Rad51-made D-loops: implications for crossover control in mitotic recombinationRohit Prakash
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
Genes Dev 23:67-79. 2009..Importantly, Mph1, but not a helicase-defective variant, dissociates Rad51-made D-loops. Overall, the results from our analyses suggest a new role of Mph1 in promoting the noncrossover repair of DNA double-strand breaks...
Functional interactions of meiotic recombination factors Rdh54 and Dmc1Peter Chi
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520, USA
DNA Repair (Amst) 8:279-84. 2009..The biochemical systems established in this study should be useful for the continuing dissection of the action mechanism of Rdh54 and Dmc1...
Roles of ATP binding and ATP hydrolysis in human Rad51 recombinase functionPeter Chi
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520, USA
DNA Repair (Amst) 5:381-91. 2006..These results help form the basis for understanding the functions of ATP binding and ATP hydrolysis in hRad51-mediated recombination reactions...
Multiplicity of DNA end resection machineries in chromosome break repairHengyao Niu
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
Genes Dev 23:1481-6. 2009..Sinha and colleagues also demonstrated that the DNA end-binding protein complex Ku regulates the activity of AdnAB...
Mechanism of homologous recombination: mediators and helicases take on regulatory functionsPatrick Sung
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, USA
Nat Rev Mol Cell Biol 7:739-50. 2006..Defects in BLM are also associated with the cancer phenotype. The past several years have witnessed dramatic advances in our understanding of the mechanism and regulation of HR...
Rad51 recombinase and recombination mediatorsPatrick Sung
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 278:42729-32. 2003
Functional significance of the Rad51-Srs2 complex in Rad51 presynaptic filament disruptionSierra Colavito
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, CT 06520, USA
Nucleic Acids Res 37:6754-64. 2009..These results highlight the importance of Rad51 interaction in the anti-recombinase function of Srs2, and provide evidence that this Srs2 function can be uncoupled from its helicase activity...
Functional role of BLAP75 in BLM-topoisomerase IIIalpha-dependent holliday junction processingSteven Raynard
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520, USA
J Biol Chem 283:15701-8. 2008..This result provides proof that the functional integrity of the BTB complex is contingent upon the interaction of BLAP75 with Topo IIIalpha...
Promotion and regulation of homologous recombination by DNA helicasesSierra Colavito
Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, 333 Cedar St, SHM C130, New Haven, CT 06520 8024, USA
Methods 51:329-35. 2010..These regulatory pathways function in parallel to promote the usage of the genome-preserving synthesis-dependent strand annealing HR pathway or otherwise suppress crossover formation...
Research Grants
- Molecular Basis of BRCA2-mediated DNA Repair and Cancer AvoidancePatrick Sung; Fiscal Year: 2007..Our studies are therefore highly germane for cancer etiology, as the molecular information derived from them can be exploited to advance cancer diagnosis, prognosis and treatment. ..
- DNA Repair Genes and Proteins of the RAD52 groupPatrick Sung; Fiscal Year: 2010..The results from our research endeavors have direct relevance to understanding the role of homologous recombination in cancer suppression. ..
- BLM-mediated Homologous Recombination Regulation and Tumor SuppressionPatrick Sung; Fiscal Year: 2007..The results from our research endeavors will shed mechanistic light on BLM-dependent control mechanisms of HR and will provide an explanation for the genome instability and cancer susceptibility in BS patients. ..
- Homology-directed Repair of DNA Breaks in HumansPatrick Sung; Fiscal Year: 2007..The results should shed some light on the mechanistic underpinnings of the homologous recombination machinery in human cells and will have important implications for cancer etiology and prevention. ..
- Role of Rad51 Paralogs in Mammalian DNA RepairPatrick Sung; Fiscal Year: 2006..The studies should shed some light on the biological functions of the Rad51 paralogs and contribute to deciphering the mechanism of homologous recombinational repair in higher eukaryotic cells. ..
- FORMATION AND RESOLUTION OF RECOMBINATION INTERMEDIATESPatrick Sung; Fiscal Year: 2006..The studies should provide insights about the mechanisms of the major recombination pathways in eukaryotic cells. ..
- Molecular Basis of BRCA2-mediated DNA Repair and Cancer AvoidancePatrick Sung; Fiscal Year: 2011..Our studies are therefore highly germane for cancer etiology, as the molecular information derived from them can be exploited to advance cancer diagnosis, prognosis and treatment. ..
- FORMATION AND RESOLUTION OF RECOMBINATION INTERMEDIATESPatrick Sung; Fiscal Year: 2010..For these reasons, the studies outlined in the renewal application have direct relevance to cancer biology and public health. ..
- BLM-mediated Homologous Recombination Regulation and Tumor SuppressionPatrick Sung; Fiscal Year: 2010..The results from our research endeavors will shed mechanistic light on BLM-dependent control mechanisms of HR and will provide an explanation for the genome instability and cancer susceptibility in BS patients. ..
- FORMATION AND RESOLUTION OF RECOMBINATION INTERMEDIATESPatrick Sung; Fiscal Year: 2009..For these reasons, the studies outlined in the renewal application have direct relevance to cancer biology and public health. ..
- DNA Repair Genes and Proteins of the RAD52 groupPatrick Sung; Fiscal Year: 2009..abstract_text> ..
- YEAST DNA REPAIR GENES AND PROTEINS OF THE RAD52 GROUPPatrick Sung; Fiscal Year: 1999..These proposed studies represent the starting point in dissecting the molecular mechanism of homologous recombination and repair of chromosomal breakage in eukaryotes. ..
- FORMATION AND RESOLUTION OF RECOMBINATION INTERMEDIATESPatrick Sung; Fiscal Year: 2002..The Msh4 and Msh5 proteins will be purified and biochemical studies will be carried out to test the hypothesis that they interact with the Holliday structure and with other recombination intermediates. ..
- YEAST DNA REPAIR GENES AND PROTEINS OF THE RAD52 GROUPPatrick Sung; Fiscal Year: 2004..The results from these studies will be important for understanding the mechanism of DNA double-strand break re air b recombination in eukaryotes including humans. ..
