Michael R Seringhaus

Summary

Affiliation: Yale University
Country: USA

Publications

  1. pmc Publishing perishing? Towards tomorrow's information architecture
    Michael R Seringhaus
    Department of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, CT 06520, USA
    BMC Bioinformatics 8:17. 2007
  2. pmc Mismatch oligonucleotides in human and yeast: guidelines for probe design on tiling microarrays
    Michael Seringhaus
    Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA
    BMC Genomics 9:635. 2008
  3. ncbi request reprint Divergence of transcription factor binding sites across related yeast species
    Anthony R Borneman
    Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA
    Science 317:815-9. 2007
  4. ncbi request reprint Transcription factor binding site identification in yeast: a comparison of high-density oligonucleotide and PCR-based microarray platforms
    Anthony R Borneman
    Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA
    Funct Integr Genomics 7:335-45. 2007
  5. pmc Uncovering trends in gene naming
    Michael R Seringhaus
    Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520, USA
    Genome Biol 9:401. 2008
  6. pmc Personalized genomic medicine with a patchwork, partially owned genome
    Christopher E Mason
    Program on Neurogenetics, Yale University Medical School, New Haven, Connecticut 06511, USA
    Yale J Biol Med 80:145-51. 2007

Detail Information

Publications6

  1. pmc Publishing perishing? Towards tomorrow's information architecture
    Michael R Seringhaus
    Department of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, CT 06520, USA
    BMC Bioinformatics 8:17. 2007
    ..We present our vision of the optimal information architecture for the biosciences, and close with tangible steps to improve our handling of scientific information today while paving the way for an expansive central index in the future...
  2. pmc Mismatch oligonucleotides in human and yeast: guidelines for probe design on tiling microarrays
    Michael Seringhaus
    Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA
    BMC Genomics 9:635. 2008
    ..Here, we present the results of two large-scale microarray experiments on S. cerevisiae and H. sapiens genomic DNA, to explore MM oligonucleotide behavior with real sample mixtures under tiling-array conditions...
  3. ncbi request reprint Divergence of transcription factor binding sites across related yeast species
    Anthony R Borneman
    Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA
    Science 317:815-9. 2007
    ..Transcription factor binding sites have therefore diverged substantially faster than ortholog content. Thus, gene regulation resulting from transcription factor binding is likely to be a major cause of divergence between related species...
  4. ncbi request reprint Transcription factor binding site identification in yeast: a comparison of high-density oligonucleotide and PCR-based microarray platforms
    Anthony R Borneman
    Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA
    Funct Integr Genomics 7:335-45. 2007
    ..The HDO array platform provides a far more robust array system by all measures than PCR-based arrays, all of which is directly attributable to the large number of probes available...
  5. pmc Uncovering trends in gene naming
    Michael R Seringhaus
    Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT 06520, USA
    Genome Biol 9:401. 2008
    ..We categorize, for instance, those that involve a naming system transferred from another context (for example, Pavlov's dogs). We hope this analysis provides clues to better steer gene naming in the future...
  6. pmc Personalized genomic medicine with a patchwork, partially owned genome
    Christopher E Mason
    Program on Neurogenetics, Yale University Medical School, New Haven, Connecticut 06511, USA
    Yale J Biol Med 80:145-51. 2007
    ..In this brief review, we shall focus on these developments and examine how they are changing our understanding of our genome...