Affiliation: Yale University
- Efficient yeast ChIP-Seq using multiplex short-read DNA sequencingPhilippe Lefrançois
Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA
BMC Genomics 10:37. 2009....
- Mapping accessible chromatin regions using Sono-SeqRaymond K Auerbach
Program in Computational Biology, Yale University, New Haven, CT 06520, USA
Proc Natl Acad Sci U S A 106:14926-31. 2009..Furthermore, our results provide insights into the mapping of binding sites by using ChIP-Seq experiments and the value of reference samples that should be used in such experiments...
- ChIP-Seq using high-throughput DNA sequencing for genome-wide identification of transcription factor binding sitesPhilippe Lefrançois
Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, USA
Methods Enzymol 470:77-104. 2010..The use of multiplex short-read sequencing (i.e., barcoding) enables the analysis of many ChIP samples simultaneously, which is especially valuable for organisms with small genomes such as yeast...