Mark R Flory

Summary

Affiliation: Wesleyan University
Country: USA

Publications

  1. pmc Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas
    Nichole L King
    Institute for Systems Biology, N 34th Street, Seattle, WA 98103, USA
    Genome Biol 7:R106. 2006
  2. ncbi request reprint Quantitative proteomic analysis of the budding yeast cell cycle using acid-cleavable isotope-coded affinity tag reagents
    Mark R Flory
    Department of Molecular Biology and Biochemistry, Wesleyan University, Middletown, CT 06459, USA
    Proteomics 6:6146-57. 2006
  3. ncbi request reprint Assessing bias in experiment design for large scale mass spectrometry-based quantitative proteomics
    Amol Prakash
    Departments of Computer Science and Engineering, University of Washington, Seattle, Washington 98195, USA
    Mol Cell Proteomics 6:1741-8. 2007
  4. ncbi request reprint Pcp1p, an Spc110p-related calmodulin target at the centrosome of the fission yeast Schizosaccharomyces pombe
    Mark R Flory
    Molecular and Cellular Biology Program, University of Washington, Seattle, Washington 98195, USA
    Cell Growth Differ 13:47-58. 2002
  5. ncbi request reprint The centrosomal proteins pericentrin and kendrin are encoded by alternatively spliced products of one gene
    Mark R Flory
    Molecular and Cellular Biology Program, University of Washington, Seattle, WA, 98195 USA
    Genomics 82:401-5. 2003
  6. ncbi request reprint Proteomic approaches for the identification of cell cycle-related drug targets
    Mark R Flory
    Institute for Systems Biology, 1441 North 34th Street, Seattle, WA 98103, USA
    Prog Cell Cycle Res 5:167-71. 2003
  7. ncbi request reprint Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone
    Vivian L MacKay
    Department of Biochemistry, University of Washington, Seattle, WA 98195, USA
    Mol Cell Proteomics 3:478-89. 2004

Collaborators

  • Amol Prakash
  • Ruedi Aebersold
  • TRISHA DAVIS
  • G Lynn Law
  • Nichole L King
  • Hookeun Lee
  • Vivian L MacKay
  • Jeffrey A Ranish
  • Bong Kim
  • Daniel B Martin
  • Eric W Deutsch
  • James S Eddes
  • Alexey I Nesvizhskii
  • Jimmy Eng
  • Brian Raught
  • Parag Mallick
  • Frank Desiere
  • X L Xu
  • David R Morris
  • Eileen Turcott
  • Xiaohong Li
  • David R Goodlett
  • Kyle A Serikawa
  • Lue Ping Zhao

Detail Information

Publications7

  1. pmc Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas
    Nichole L King
    Institute for Systems Biology, N 34th Street, Seattle, WA 98103, USA
    Genome Biol 7:R106. 2006
    ..We highlight the use of this resource for data mining, construction of high quality lists for targeted proteomics, validation of proteins, and software development...
  2. ncbi request reprint Quantitative proteomic analysis of the budding yeast cell cycle using acid-cleavable isotope-coded affinity tag reagents
    Mark R Flory
    Department of Molecular Biology and Biochemistry, Wesleyan University, Middletown, CT 06459, USA
    Proteomics 6:6146-57. 2006
    ..cerevisiae proteins, and will enable further development of technologies for global proteomic analysis of higher eukaryotes...
  3. ncbi request reprint Assessing bias in experiment design for large scale mass spectrometry-based quantitative proteomics
    Amol Prakash
    Departments of Computer Science and Engineering, University of Washington, Seattle, Washington 98195, USA
    Mol Cell Proteomics 6:1741-8. 2007
    ..Moreover we show that reducing bias by correcting for just a few steps, for example randomizing the run order, does not provide much gain in statistical power for biomarker discovery...
  4. ncbi request reprint Pcp1p, an Spc110p-related calmodulin target at the centrosome of the fission yeast Schizosaccharomyces pombe
    Mark R Flory
    Molecular and Cellular Biology Program, University of Washington, Seattle, Washington 98195, USA
    Cell Growth Differ 13:47-58. 2002
    ....
  5. ncbi request reprint The centrosomal proteins pericentrin and kendrin are encoded by alternatively spliced products of one gene
    Mark R Flory
    Molecular and Cellular Biology Program, University of Washington, Seattle, WA, 98195 USA
    Genomics 82:401-5. 2003
    ....
  6. ncbi request reprint Proteomic approaches for the identification of cell cycle-related drug targets
    Mark R Flory
    Institute for Systems Biology, 1441 North 34th Street, Seattle, WA 98103, USA
    Prog Cell Cycle Res 5:167-71. 2003
    ....
  7. ncbi request reprint Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone
    Vivian L MacKay
    Department of Biochemistry, University of Washington, Seattle, WA 98195, USA
    Mol Cell Proteomics 3:478-89. 2004
    ..These observations underscore that analysis of transcript level, albeit extremely important, is insufficient by itself to describe completely the phenotypes of cells under different conditions...