Tao Jia

Summary

Affiliation: Virginia Polytechnic Institute and State University
Country: USA

Publications

  1. ncbi Post-transcriptional regulation of noise in protein distributions during gene expression
    Tao Jia
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev Lett 105:018101. 2010
  2. ncbi Intrinsic noise in stochastic models of gene expression with molecular memory and bursting
    Tao Jia
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev Lett 106:058102. 2011
  3. ncbi Connecting protein and mRNA burst distributions for stochastic models of gene expression
    Vlad Elgart
    Department of Physics, Virginia Tech, Blacksburg, VA 24061, USA
    Phys Biol 8:046001. 2011
  4. ncbi Regulation by small RNAs via coupled degradation: mean-field and variational approaches
    Thierry Platini
    Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev E Stat Nonlin Soft Matter Phys 84:021928. 2011
  5. ncbi Quantifying mRNA synthesis and decay rates using small RNAs
    Vlad Elgart
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, USA
    Biophys J 98:2780-4. 2010
  6. ncbi Applications of Little's Law to stochastic models of gene expression
    Vlad Elgart
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, 24060, USA
    Phys Rev E Stat Nonlin Soft Matter Phys 82:021901. 2010
  7. ncbi Stochastic modeling of regulation of gene expression by multiple small RNAs
    CHARLES BAKER
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev E Stat Nonlin Soft Matter Phys 85:061915. 2012

Detail Information

Publications7

  1. ncbi Post-transcriptional regulation of noise in protein distributions during gene expression
    Tao Jia
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev Lett 105:018101. 2010
    ..The results obtained also demonstrate how different sources of intrinsic noise in gene expression can be discriminated based on observations of regulated protein distributions...
  2. ncbi Intrinsic noise in stochastic models of gene expression with molecular memory and bursting
    Tao Jia
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev Lett 106:058102. 2011
    ..The analytical expressions obtained provide insight into the role of transcriptional, post-transcriptional, and post-translational mechanisms in controlling the noise in gene expression...
  3. ncbi Connecting protein and mRNA burst distributions for stochastic models of gene expression
    Vlad Elgart
    Department of Physics, Virginia Tech, Blacksburg, VA 24061, USA
    Phys Biol 8:046001. 2011
    ..The analytical results obtained in this work can thus serve as useful inputs for a broad range of studies focusing on stochasticity in gene expression...
  4. ncbi Regulation by small RNAs via coupled degradation: mean-field and variational approaches
    Thierry Platini
    Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev E Stat Nonlin Soft Matter Phys 84:021928. 2011
    ..The proposed approach can be applied for quantitative modeling of stochastic gene expression in complex regulatory networks...
  5. ncbi Quantifying mRNA synthesis and decay rates using small RNAs
    Vlad Elgart
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, USA
    Biophys J 98:2780-4. 2010
    ..Our analysis suggests experimental protocols for determining parameters controlling the efficiency of stoichiometric regulation by small RNAs and for analyzing factors and processes regulating changes in mRNA transcription and decay...
  6. ncbi Applications of Little's Law to stochastic models of gene expression
    Vlad Elgart
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, 24060, USA
    Phys Rev E Stat Nonlin Soft Matter Phys 82:021901. 2010
    ..The results obtained show that the degree of transcriptional bursting can, in principle, be determined from changes in mean steady-state protein levels for general stochastic models of gene expression...
  7. ncbi Stochastic modeling of regulation of gene expression by multiple small RNAs
    CHARLES BAKER
    Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA
    Phys Rev E Stat Nonlin Soft Matter Phys 85:061915. 2012
    ..In particular, we show that, in contrast to regulation by a single sRNA, multiple sRNAs provide a mechanism for independently controlling the mean and variance of the regulated protein distribution...