A Theologis

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Heterodimeric interactions among the 1-amino-cyclopropane-1-carboxylate synthase polypeptides encoded by the Arabidopsis gene family
    Atsunari Tsuchisaka
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 101:2275-80. 2004
  2. pmc Goodbye to 'one by one' genetics
    A Theologis
    Plant Gene Expression Center, Buchanan Street, Albany, CA 94710, USA
    Genome Biol 2:COMMENT2004. 2001
  3. ncbi request reprint Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana
    A Theologis
    Plant Gene Expression Center USDA U C Berkley, Albany, California 94710, USA
    Nature 408:816-20. 2000
  4. pmc To give or not to give? That is the question
    Athanasios Theologis
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Physiol 135:4-9. 2004
  5. ncbi request reprint LE-ACS4, a fruit ripening and wound-induced 1-aminocyclopropane-1-carboxylate synthase gene of tomato (Lycopersicon esculentum). Expression in Escherichia coli, structural characterization, expression characteristics, and phylogenetic analysis
    J E Lincoln
    Plant Gene Expression Center, Albany, California 94710
    J Biol Chem 268:19422-30. 1993
  6. pmc Protein-protein interactions among the Aux/IAA proteins
    J Kim
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 94:11786-91. 1997
  7. ncbi request reprint Characterization of two members (ACS1 and ACS3) of the 1-aminocyclopropane-1-carboxylate synthase gene family of Arabidopsis thaliana
    X Liang
    Plant Gene Expression Center, Albany, CA 94710, USA
    Gene 167:17-24. 1995
  8. ncbi request reprint 1-aminocyclopropane-1-carboxylate synthase in tomato is encoded by a multigene family whose transcription is induced during fruit and floral senescence
    W H Rottmann
    Plant Gene Expression Center, ARS USDA, Albany, CA 94710
    J Mol Biol 222:937-61. 1991
  9. pmc Early auxin-induced genes encode short-lived nuclear proteins
    S Abel
    Plant Gene Expression Center, Albany, CA 94710
    Proc Natl Acad Sci U S A 91:326-30. 1994
  10. ncbi request reprint The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana
    S Abel
    Plant Gene Expression Center, Albany, CA 94710, USA
    J Mol Biol 251:533-49. 1995

Collaborators

  • Jose M Alonso
  • S Khan
  • S L Salzberg
  • Y Li
  • X Lin
  • J Kim
  • H Chen
  • Claire M Fraser
  • Motoaki Seki
  • Kei Iida
  • Kazuo Shinozaki
  • Yoshihide Hayashizaki
  • Hailing Jin
  • C J Kim
  • Atsunari Tsuchisaka
  • Yoko Okushima
  • Guixia Yu
  • Joseph R Ecker
  • Paul J Overvoorde
  • Kayoko Yamada
  • Alison Smith
  • April Chan
  • Beth Hughes
  • S Abel
  • Charlie Chang
  • Hong Quach
  • Courtney Onodera
  • Hong L Quach
  • Joshua I Armstrong
  • Shiaulou Yuan
  • Joseph M Dale
  • Takeshi Yamagami
  • F Ouellet
  • Shang Gao
  • Xiaoming Zhang
  • A S Tarun
  • Amy Liu
  • Kazunari Arima
  • Amy Lui
  • Irina Mitina
  • Diana Nguyen
  • X Liang
  • Vanessa N Tanner
  • Jun Kawai
  • Shirley X Liu
  • Bao Lam
  • Asako Kamiya
  • Vickie W Hsuan
  • Troy Wu
  • Cristina Meyers
  • Marie M H Chan
  • Michelle Nguyen
  • Eric Koesema
  • George Karlin-Newmann
  • Mani Gurjal
  • Charlie H Chang
  • Nancy F Hansen
  • Kenji Akiyama
  • Masakazu Satou
  • Courtney S Onodera
  • Molly Miranda
  • Ted Jones
  • Fumika Banno
  • Paul Shinn
  • Jeong M Lee
  • Justine M Deng
  • Maiko Nakajima
  • Rosa Cheuk
  • Hank C Wu
  • Cecilia Wong
  • Yasser Ansari
  • Leah Bowser
  • Jenny Banh
  • Jun Lim
  • Mitsue Toriumi
  • Paul X Jiang
  • Piero Carninci
  • Audrey M Southwick
  • Akiko Enju
  • Qimin Chao
  • Chanda Johnson-Hopson
  • Andrew D Goldsmith
  • Meagan Karnes
  • Yuki Yamamura
  • Nathan Choy
  • Erika K Wallender
  • Junko Ishida
  • Takahiro Arakawa
  • Hitomi Sakano
  • Carolyn C Tang

Detail Information

Publications22

  1. pmc Heterodimeric interactions among the 1-amino-cyclopropane-1-carboxylate synthase polypeptides encoded by the Arabidopsis gene family
    Atsunari Tsuchisaka
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 101:2275-80. 2004
    ..Nonfunctional heterodimerization may also play a regulatory role during the plant life cycle...
  2. pmc Goodbye to 'one by one' genetics
    A Theologis
    Plant Gene Expression Center, Buchanan Street, Albany, CA 94710, USA
    Genome Biol 2:COMMENT2004. 2001
    ..It will revolutionize how we answer questions about the biology and evolution of plants as well as how we confront and resolve world-wide agricultural problems...
  3. ncbi request reprint Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana
    A Theologis
    Plant Gene Expression Center USDA U C Berkley, Albany, California 94710, USA
    Nature 408:816-20. 2000
    ..Chromosome 1 contains about 300 gene families with clustered duplications. There are also many repeat elements, representing 8% of the sequence...
  4. pmc To give or not to give? That is the question
    Athanasios Theologis
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Physiol 135:4-9. 2004
  5. ncbi request reprint LE-ACS4, a fruit ripening and wound-induced 1-aminocyclopropane-1-carboxylate synthase gene of tomato (Lycopersicon esculentum). Expression in Escherichia coli, structural characterization, expression characteristics, and phylogenetic analysis
    J E Lincoln
    Plant Gene Expression Center, Albany, California 94710
    J Biol Chem 268:19422-30. 1993
    ..The divergence of this sublineage is a relatively recent event in the evolution of ACC synthase protein...
  6. pmc Protein-protein interactions among the Aux/IAA proteins
    J Kim
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 94:11786-91. 1997
    ..These interactions provide a molecular basis for the developmental and tissue-specific manner of auxin action...
  7. ncbi request reprint Characterization of two members (ACS1 and ACS3) of the 1-aminocyclopropane-1-carboxylate synthase gene family of Arabidopsis thaliana
    X Liang
    Plant Gene Expression Center, Albany, CA 94710, USA
    Gene 167:17-24. 1995
    ..Introduction of TNP into ACS1 restores the ACS activity, whereas its removal from the enzymatically active ACS2 results in a loss of activity. The results suggest that TNP is crucial for expression of ACS activity in E. coli...
  8. ncbi request reprint 1-aminocyclopropane-1-carboxylate synthase in tomato is encoded by a multigene family whose transcription is induced during fruit and floral senescence
    W H Rottmann
    Plant Gene Expression Center, ARS USDA, Albany, CA 94710
    J Mol Biol 222:937-61. 1991
    ..The data indicate that ACC synthase is encoded by a divergent multigene family in tomato that encodes proteins related to aminotransferases...
  9. pmc Early auxin-induced genes encode short-lived nuclear proteins
    S Abel
    Plant Gene Expression Center, Albany, CA 94710
    Proc Natl Acad Sci U S A 91:326-30. 1994
    ..We propose that these proteins act as activators or repressors of genes responsible for mediating the various auxin responses...
  10. ncbi request reprint The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana
    S Abel
    Plant Gene Expression Center, Albany, CA 94710, USA
    J Mol Biol 251:533-49. 1995
    ..These proteins are proposed to mediate tissue-specific and cell-type restricted responses to the hormone during plant growth and development...
  11. pmc IAA17/AXR3: biochemical insight into an auxin mutant phenotype
    F Ouellet
    Plant Gene Expression Center, 800 Buchanan Street, Albany, California 94710, USA
    Plant Cell 13:829-41. 2001
    ..By extension, these findings may provide insight into the effects of analogous mutations in other members of the Aux/IAA gene family...
  12. ncbi request reprint ACS4, a primary indoleacetic acid-responsive gene encoding 1-aminocyclopropane-1-carboxylate synthase in Arabidopsis thaliana. Structural characterization, expression in Escherichia coli, and expression characteristics in response to auxin [corrected]
    S Abel
    Plant Gene Expression Center, Albany, California 94710, USA
    J Biol Chem 270:19093-9. 1995
    ..An ACS4 cDNA was generated by reverse transcriptase-polymerase chain reaction, and the authenticity was confirmed by expression of ACC synthase activity in Escherichia coli...
  13. ncbi request reprint AUXIN RESPONSE FACTOR 2 (ARF2): a pleiotropic developmental regulator
    Yoko Okushima
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Plant J 43:29-46. 2005
    ....
  14. ncbi request reprint Complementation analysis of mutants of 1-aminocyclopropane- 1-carboxylate synthase reveals the enzyme is a dimer with shared active sites
    A S Tarun
    Plant Gene Expression Center, Albany, California 94710, USA
    J Biol Chem 273:12509-14. 1998
    ..The data suggest that ACS functions as a dimer with shared active sites...
  15. pmc Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19
    Yoko Okushima
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Cell 17:444-63. 2005
    ..These observations provide molecular insight into the unique and overlapping functions of ARF gene family members in Arabidopsis...
  16. pmc Unique and overlapping expression patterns among the Arabidopsis 1-amino-cyclopropane-1-carboxylate synthase gene family members
    Atsunari Tsuchisaka
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Physiol 136:2982-3000. 2004
    ..This raises the prospect that functional ACS heterodimers may be formed in planta...
  17. pmc A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana
    Atsunari Tsuchisaka
    Plant Gene Expression Center, Albany, California 94710, USA
    Genetics 183:979-1003. 2009
    ....
  18. ncbi request reprint Empirical analysis of transcriptional activity in the Arabidopsis genome
    Kayoko Yamada
    Plant Gene Expression Center, Albany, CA 94710, USA
    Science 302:842-6. 2003
    ..This approach resulted in completion of approximately 30% of the Arabidopsis ORFeome as a resource for global functional experimentation of the plant proteome...
  19. pmc Identification of inhibitors of auxin transcriptional activation by means of chemical genetics in Arabidopsis
    Joshua I Armstrong
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 101:14978-83. 2004
    ..This strategy promises to yield powerful tools for the discovery of unidentified components of the auxin-signaling networks and the study of auxin's participation in various stages of plant development...
  20. ncbi request reprint Biochemical diversity among the 1-amino-cyclopropane-1-carboxylate synthase isozymes encoded by the Arabidopsis gene family
    Takeshi Yamagami
    Plant Gene Expression Center, United States Department of Agriculture, Albany, California 94710, USA
    J Biol Chem 278:49102-12. 2003
    ..It is proposed that biochemically diverse ACS isozymes function in unique cellular environments for the biosynthesis of C2H4, permitting the signaling molecule to exert its unique effects in a tissue- or cell-specific fashion...
  21. pmc Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana
    Paul J Overvoorde
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Cell 17:3282-300. 2005
    ..The data suggest extensive functional redundancy among Aux/IAA gene family members and that enhanced stability of the AXR3/IAA17 protein severely alters the molecular phenotype, resulting in developmental defects...
  22. pmc The 1-aminocyclopropane-1-carboxylate synthase gene family of Arabidopsis thaliana
    X Liang
    Plant Gene Expression Center, Albany, CA 94710
    Proc Natl Acad Sci U S A 89:11046-50. 1992
    ....