A Theologis

Summary

Affiliation: University of California
Country: USA

Publications

  1. pmc Heterodimeric interactions among the 1-amino-cyclopropane-1-carboxylate synthase polypeptides encoded by the Arabidopsis gene family
    Atsunari Tsuchisaka
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 101:2275-80. 2004
  2. pmc Goodbye to 'one by one' genetics
    A Theologis
    Plant Gene Expression Center, Buchanan Street, Albany, CA 94710, USA
    Genome Biol 2:COMMENT2004. 2001
  3. ncbi request reprint Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana
    A Theologis
    Plant Gene Expression Center USDA U C Berkley, Albany, California 94710, USA
    Nature 408:816-20. 2000
  4. pmc To give or not to give? That is the question
    Athanasios Theologis
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Physiol 135:4-9. 2004
  5. ncbi request reprint LE-ACS4, a fruit ripening and wound-induced 1-aminocyclopropane-1-carboxylate synthase gene of tomato (Lycopersicon esculentum). Expression in Escherichia coli, structural characterization, expression characteristics, and phylogenetic analysis
    J E Lincoln
    Plant Gene Expression Center, Albany, California 94710
    J Biol Chem 268:19422-30. 1993
  6. pmc Protein-protein interactions among the Aux/IAA proteins
    J Kim
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 94:11786-91. 1997
  7. ncbi request reprint Characterization of two members (ACS1 and ACS3) of the 1-aminocyclopropane-1-carboxylate synthase gene family of Arabidopsis thaliana
    X Liang
    Plant Gene Expression Center, Albany, CA 94710, USA
    Gene 167:17-24. 1995
  8. ncbi request reprint 1-aminocyclopropane-1-carboxylate synthase in tomato is encoded by a multigene family whose transcription is induced during fruit and floral senescence
    W H Rottmann
    Plant Gene Expression Center, ARS USDA, Albany, CA 94710
    J Mol Biol 222:937-61. 1991
  9. pmc Early auxin-induced genes encode short-lived nuclear proteins
    S Abel
    Plant Gene Expression Center, Albany, CA 94710
    Proc Natl Acad Sci U S A 91:326-30. 1994
  10. ncbi request reprint The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana
    S Abel
    Plant Gene Expression Center, Albany, CA 94710, USA
    J Mol Biol 251:533-49. 1995

Research Grants

  1. The Aux/IAA and ARF Gene Families in Auxin Signaling
    Athanasios Theologis; Fiscal Year: 2005
  2. AUXIN SIGNALING APPARATUS
    Athanasios Theologis; Fiscal Year: 1999
  3. STRUCTURE AND EXPRESSION OF HORMONALLY REGULATED GENES
    Athanasios Theologis; Fiscal Year: 1993

Collaborators

  • Jose M Alonso
  • S Khan
  • Y Li
  • J Kim
  • S L Salzberg
  • M Nguyen
  • X Lin
  • H Chen
  • Claire M Fraser
  • Motoaki Seki
  • Kei Iida
  • Kazuo Shinozaki
  • Yoshihide Hayashizaki
  • Hailing Jin
  • C J Kim
  • Atsunari Tsuchisaka
  • Yoko Okushima
  • Guixia Yu
  • Joseph R Ecker
  • Paul J Overvoorde
  • Kayoko Yamada
  • Beth Hughes
  • April Chan
  • Courtney Onodera
  • Alison Smith
  • S Abel
  • Hong Quach
  • Charlie Chang
  • Hong L Quach
  • Joshua I Armstrong
  • Shiaulou Yuan
  • Joseph M Dale
  • Takeshi Yamagami
  • F Ouellet
  • Xiaoming Zhang
  • Shang Gao
  • Amy Liu
  • Diana Nguyen
  • Irina Mitina
  • Amy Lui
  • Kazunari Arima
  • Vanessa N Tanner
  • X Liang
  • Chanda Johnson-Hopson
  • Troy Wu
  • Hitomi Sakano
  • Curtis J Palm
  • Mitsue Toriumi
  • Paul Shinn
  • Cecilia Wong
  • Justine M Deng
  • Mari Narusaka
  • Shelise Brooks
  • Meagan Karnes
  • Andrew D Goldsmith
  • Jenny Banh
  • Maria Vaysberg
  • Shirley X Liu
  • Hank C Wu
  • Charlie H Chang
  • Kenji Akiyama
  • Courtney S Onodera
  • Erika K Wallender
  • Yasser Ansari
  • Marie M H Chan
  • Asako Kamiya
  • William F Haddon
  • Jun Lim
  • Jun Kawai
  • Leah Bowser
  • Paul Pham
  • Fumika Banno
  • Matthew Tripp
  • Ronald W Davis
  • Masakazu Satou
  • Bao Lam
  • Rosa Cheuk
  • Paul X Jiang
  • Yuki Yamamura
  • Audrey M Southwick
  • Ted Jones
  • Vickie W Hsuan
  • Racquel Tamse
  • Carolyn C Tang
  • Nathan Choy
  • Mani Gurjal
  • Akiko Enju
  • Cristina Meyers
  • George Karlin-Newmann
  • Qimin Chao

Detail Information

Publications21

  1. pmc Heterodimeric interactions among the 1-amino-cyclopropane-1-carboxylate synthase polypeptides encoded by the Arabidopsis gene family
    Atsunari Tsuchisaka
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 101:2275-80. 2004
    ..Nonfunctional heterodimerization may also play a regulatory role during the plant life cycle...
  2. pmc Goodbye to 'one by one' genetics
    A Theologis
    Plant Gene Expression Center, Buchanan Street, Albany, CA 94710, USA
    Genome Biol 2:COMMENT2004. 2001
    ..It will revolutionize how we answer questions about the biology and evolution of plants as well as how we confront and resolve world-wide agricultural problems...
  3. ncbi request reprint Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana
    A Theologis
    Plant Gene Expression Center USDA U C Berkley, Albany, California 94710, USA
    Nature 408:816-20. 2000
    ..Chromosome 1 contains about 300 gene families with clustered duplications. There are also many repeat elements, representing 8% of the sequence...
  4. pmc To give or not to give? That is the question
    Athanasios Theologis
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Physiol 135:4-9. 2004
  5. ncbi request reprint LE-ACS4, a fruit ripening and wound-induced 1-aminocyclopropane-1-carboxylate synthase gene of tomato (Lycopersicon esculentum). Expression in Escherichia coli, structural characterization, expression characteristics, and phylogenetic analysis
    J E Lincoln
    Plant Gene Expression Center, Albany, California 94710
    J Biol Chem 268:19422-30. 1993
    ..The divergence of this sublineage is a relatively recent event in the evolution of ACC synthase protein...
  6. pmc Protein-protein interactions among the Aux/IAA proteins
    J Kim
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 94:11786-91. 1997
    ..These interactions provide a molecular basis for the developmental and tissue-specific manner of auxin action...
  7. ncbi request reprint Characterization of two members (ACS1 and ACS3) of the 1-aminocyclopropane-1-carboxylate synthase gene family of Arabidopsis thaliana
    X Liang
    Plant Gene Expression Center, Albany, CA 94710, USA
    Gene 167:17-24. 1995
    ..Introduction of TNP into ACS1 restores the ACS activity, whereas its removal from the enzymatically active ACS2 results in a loss of activity. The results suggest that TNP is crucial for expression of ACS activity in E. coli...
  8. ncbi request reprint 1-aminocyclopropane-1-carboxylate synthase in tomato is encoded by a multigene family whose transcription is induced during fruit and floral senescence
    W H Rottmann
    Plant Gene Expression Center, ARS USDA, Albany, CA 94710
    J Mol Biol 222:937-61. 1991
    ..The data indicate that ACC synthase is encoded by a divergent multigene family in tomato that encodes proteins related to aminotransferases...
  9. pmc Early auxin-induced genes encode short-lived nuclear proteins
    S Abel
    Plant Gene Expression Center, Albany, CA 94710
    Proc Natl Acad Sci U S A 91:326-30. 1994
    ..We propose that these proteins act as activators or repressors of genes responsible for mediating the various auxin responses...
  10. ncbi request reprint The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana
    S Abel
    Plant Gene Expression Center, Albany, CA 94710, USA
    J Mol Biol 251:533-49. 1995
    ..These proteins are proposed to mediate tissue-specific and cell-type restricted responses to the hormone during plant growth and development...
  11. pmc IAA17/AXR3: biochemical insight into an auxin mutant phenotype
    F Ouellet
    Plant Gene Expression Center, 800 Buchanan Street, Albany, California 94710, USA
    Plant Cell 13:829-41. 2001
    ..By extension, these findings may provide insight into the effects of analogous mutations in other members of the Aux/IAA gene family...
  12. ncbi request reprint ACS4, a primary indoleacetic acid-responsive gene encoding 1-aminocyclopropane-1-carboxylate synthase in Arabidopsis thaliana. Structural characterization, expression in Escherichia coli, and expression characteristics in response to auxin [corrected]
    S Abel
    Plant Gene Expression Center, Albany, California 94710, USA
    J Biol Chem 270:19093-9. 1995
    ..An ACS4 cDNA was generated by reverse transcriptase-polymerase chain reaction, and the authenticity was confirmed by expression of ACC synthase activity in Escherichia coli...
  13. ncbi request reprint AUXIN RESPONSE FACTOR 2 (ARF2): a pleiotropic developmental regulator
    Yoko Okushima
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Plant J 43:29-46. 2005
    ....
  14. pmc Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19
    Yoko Okushima
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Cell 17:444-63. 2005
    ..These observations provide molecular insight into the unique and overlapping functions of ARF gene family members in Arabidopsis...
  15. pmc Unique and overlapping expression patterns among the Arabidopsis 1-amino-cyclopropane-1-carboxylate synthase gene family members
    Atsunari Tsuchisaka
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Physiol 136:2982-3000. 2004
    ..This raises the prospect that functional ACS heterodimers may be formed in planta...
  16. pmc A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana
    Atsunari Tsuchisaka
    Plant Gene Expression Center, Albany, California 94710, USA
    Genetics 183:979-1003. 2009
    ....
  17. ncbi request reprint Empirical analysis of transcriptional activity in the Arabidopsis genome
    Kayoko Yamada
    Plant Gene Expression Center, Albany, CA 94710, USA
    Science 302:842-6. 2003
    ..This approach resulted in completion of approximately 30% of the Arabidopsis ORFeome as a resource for global functional experimentation of the plant proteome...
  18. pmc Identification of inhibitors of auxin transcriptional activation by means of chemical genetics in Arabidopsis
    Joshua I Armstrong
    Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA
    Proc Natl Acad Sci U S A 101:14978-83. 2004
    ..This strategy promises to yield powerful tools for the discovery of unidentified components of the auxin-signaling networks and the study of auxin's participation in various stages of plant development...
  19. ncbi request reprint Biochemical diversity among the 1-amino-cyclopropane-1-carboxylate synthase isozymes encoded by the Arabidopsis gene family
    Takeshi Yamagami
    Plant Gene Expression Center, United States Department of Agriculture, Albany, California 94710, USA
    J Biol Chem 278:49102-12. 2003
    ..It is proposed that biochemically diverse ACS isozymes function in unique cellular environments for the biosynthesis of C2H4, permitting the signaling molecule to exert its unique effects in a tissue- or cell-specific fashion...
  20. pmc Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana
    Paul J Overvoorde
    Plant Gene Expression Center, Albany, California 94710, USA
    Plant Cell 17:3282-300. 2005
    ..The data suggest extensive functional redundancy among Aux/IAA gene family members and that enhanced stability of the AXR3/IAA17 protein severely alters the molecular phenotype, resulting in developmental defects...
  21. pmc The 1-aminocyclopropane-1-carboxylate synthase gene family of Arabidopsis thaliana
    X Liang
    Plant Gene Expression Center, Albany, CA 94710
    Proc Natl Acad Sci U S A 89:11046-50. 1992
    ....

Research Grants15

  1. The Aux/IAA and ARF Gene Families in Auxin Signaling
    Athanasios Theologis; Fiscal Year: 2005
    ..To clone and characterize the age2 mutation, another negative regulator of the auxin signaling pathway.The elucidation of the primary mechanisrn of auxin action is of paramount importance in Plant Science. ..
  2. AUXIN SIGNALING APPARATUS
    Athanasios Theologis; Fiscal Year: 1999
    ..Understanding how auxin controls cell growth, meristem activity, xylogenesis, etc. will allow the engineering of plant species with improved properties and qualities. ..
  3. STRUCTURE AND EXPRESSION OF HORMONALLY REGULATED GENES
    Athanasios Theologis; Fiscal Year: 1993
    ....