Douglas R Taylor

Summary

Affiliation: University of Virginia
Country: USA

Publications

  1. pmc Phylogenetic analysis of mitochondrial substitution rate variation in the angiosperm tribe Sileneae
    Daniel B Sloan
    Department of Plant and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
    BMC Evol Biol 9:260. 2009
  2. pmc A quantitative genetic analysis of nuclear-cytoplasmic male sterility in structured populations of Silene vulgaris
    D R Taylor
    Department of Biology, University of Virginia, Charlottesville, VA 22903, USA
    Genetics 158:833-41. 2001
  3. pmc Conflicting levels of selection in the accumulation of mitochondrial defects in Saccharomyces cerevisiae
    Douglas R Taylor
    Department of Biology, University of Virginia, Charlottesville, VA 22904 4328, USA
    Proc Natl Acad Sci U S A 99:3690-4. 2002
  4. ncbi request reprint Common features of segregation distortion in plants and animals
    Douglas R Taylor
    Department of Biology, Box 400328, University of Virginia, Charlottesville, VA 22904 4328, USA
    Genetica 117:27-35. 2003
  5. ncbi request reprint Historical range expansion determines the phylogenetic diversity introduced during contemporary species invasion
    Douglas R Taylor
    Department of Biology, University of Virginia, Charlottesville, Virginia 22904 4328, USA
    Evolution 61:334-45. 2007
  6. ncbi request reprint Variation in mutation rate and polymorphism among mitochondrial genes of Silene vulgaris
    Camille M Barr
    Department of Biology, University of Virginia, VA, USA
    Mol Biol Evol 24:1783-91. 2007
  7. pmc Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America
    PLoS Biol 10:e1001241. 2012
  8. pmc Recent acceleration of plastid sequence and structural evolution coincides with extreme mitochondrial divergence in the angiosperm genus Silene
    Daniel B Sloan
    Department of Biology, University of Virginia, VA, USA
    Genome Biol Evol 4:294-306. 2012
  9. pmc Extensive loss of RNA editing sites in rapidly evolving Silene mitochondrial genomes: selection vs. retroprocessing as the driving force
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, Virginia 22904, USA
    Genetics 185:1369-80. 2010
  10. doi request reprint Adaptation and colonization history affect the evolution of clines in two introduced species
    Stephen R Keller
    Department of Biology, University of Virginia, Charlottesville, VA 22904 4328, USA
    New Phytol 183:678-90. 2009

Detail Information

Publications26

  1. pmc Phylogenetic analysis of mitochondrial substitution rate variation in the angiosperm tribe Sileneae
    Daniel B Sloan
    Department of Plant and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
    BMC Evol Biol 9:260. 2009
    ..noctiflora is a recent and isolated evolutionary event. This assessment, however, is based on a very limited sampling of taxa within this diverse genus...
  2. pmc A quantitative genetic analysis of nuclear-cytoplasmic male sterility in structured populations of Silene vulgaris
    D R Taylor
    Department of Biology, University of Virginia, Charlottesville, VA 22903, USA
    Genetics 158:833-41. 2001
    ....
  3. pmc Conflicting levels of selection in the accumulation of mitochondrial defects in Saccharomyces cerevisiae
    Douglas R Taylor
    Department of Biology, University of Virginia, Charlottesville, VA 22904 4328, USA
    Proc Natl Acad Sci U S A 99:3690-4. 2002
    ..The relative intensities of within- and among-cell selection may also explain the tissue specificity of human mitochondrial defects...
  4. ncbi request reprint Common features of segregation distortion in plants and animals
    Douglas R Taylor
    Department of Biology, Box 400328, University of Virginia, Charlottesville, VA 22904 4328, USA
    Genetica 117:27-35. 2003
    ..Non-Mendelian genes may therefore have greater evolutionary importance than their current abundance in nature would suggest...
  5. ncbi request reprint Historical range expansion determines the phylogenetic diversity introduced during contemporary species invasion
    Douglas R Taylor
    Department of Biology, University of Virginia, Charlottesville, Virginia 22904 4328, USA
    Evolution 61:334-45. 2007
    ..Our results provide clear insights into how historical processes may feed forward to influence the phylogenetic diversity of species invading new geographic ranges...
  6. ncbi request reprint Variation in mutation rate and polymorphism among mitochondrial genes of Silene vulgaris
    Camille M Barr
    Department of Biology, University of Virginia, VA, USA
    Mol Biol Evol 24:1783-91. 2007
    ....
  7. pmc Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, Virginia, United States of America
    PLoS Biol 10:e1001241. 2012
    ..Our results raise the hypothesis that changes in recombinational processes, including gene conversion, may be a central force driving the evolution of both mutation rate and genome structure...
  8. pmc Recent acceleration of plastid sequence and structural evolution coincides with extreme mitochondrial divergence in the angiosperm genus Silene
    Daniel B Sloan
    Department of Biology, University of Virginia, VA, USA
    Genome Biol Evol 4:294-306. 2012
    ..These results raise the possibility that common evolutionary forces could be shaping the extreme but distinct patterns of divergence in both organelle genomes within this genus...
  9. pmc Extensive loss of RNA editing sites in rapidly evolving Silene mitochondrial genomes: selection vs. retroprocessing as the driving force
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, Virginia 22904, USA
    Genetics 185:1369-80. 2010
    ....
  10. doi request reprint Adaptation and colonization history affect the evolution of clines in two introduced species
    Stephen R Keller
    Department of Biology, University of Virginia, Charlottesville, VA 22904 4328, USA
    New Phytol 183:678-90. 2009
    ..Colonization history, estimated using genetic markers, is a useful null model for tests of adaptive trait divergence, especially during range expansion and invasion when selection and gene flow may not have reached equilibrium...
  11. pmc Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, VA, USA
    BMC Evol Biol 10:274. 2010
    ..The Caryophyllaceae represents one lineage that has experienced a particularly high rate of mitochondrial gene loss relative to other angiosperms...
  12. pmc The causes of mutation accumulation in mitochondrial genomes
    Maurine Neiman
    Department of Biology, University of Virginia, Charlottesville, VA 22904, USA
    Proc Biol Sci 276:1201-9. 2009
    ..We also describe an experimental framework using variation in mating system between closely related species to disentangle the root causes of mutation accumulation in mitochondrial genomes...
  13. doi request reprint Intraspecific variation in mitochondrial genome sequence, structure, and gene content in Silene vulgaris, an angiosperm with pervasive cytoplasmic male sterility
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, VA 22904, USA
    New Phytol 196:1228-39. 2012
    ..We conclude that S. vulgaris harbors an unusually large degree of variation in mtDNA sequence and structure and discuss the extent to which this variation might be related to CMS...
  14. ncbi request reprint Inheritance and recombination of mitochondrial genomes in plants, fungi and animals
    Camille M Barr
    Department of Biology, University of Virginia, Charlottesville, VA 22904, USA
    New Phytol 168:39-50. 2005
    ....
  15. ncbi request reprint Molecular evolution of insertions and deletion in the chloroplast genome of silene
    Par K Ingvarsson
    Department of Biology, University of Virginia, USA
    Mol Biol Evol 20:1737-40. 2003
    ..We show that coded indel data have high information content for phylogenetic analysis, and indels thus provide useful information to infer phylogenetic relationships at the intraspecific level...
  16. ncbi request reprint The influence of ecology and genetics on behavioral variation in salamander populations across the Eastern Continental Divide
    Leslie J Rissler
    Mountain Lake Biological Station and Department of Biology, University of Virginia, Charlottesville, Virginia 22903, USA
    Am Nat 164:201-13. 2004
    ..This study demonstrates the need to combine both ecology and genetics toward an understanding of the factors affecting species distributions, behavioral variation between populations, and patterns of genetic variation across a landscape...
  17. doi request reprint Evolutionary history of nematodes associated with sweat bees
    Quinn S McFrederick
    Department of Biology, University of Virginia, Charlottesville, VA 22904 4328, United States
    Mol Phylogenet Evol 66:847-56. 2013
    ..Additionally, all halictid hosts come from eusocial or socially polymorphic lineages, suggesting that sociality may be a factor in the suitability of hosts for Acrostichus...
  18. doi request reprint De novo transcriptome assembly and polymorphism detection in the flowering plant Silene vulgaris (Caryophyllaceae)
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, VA 22903, USA
    Mol Ecol Resour 12:333-43. 2012
    ..All of these resources are publicly available through NCBI and/or our website (http://silenegenomics.biology.virginia.edu) and should provide valuable genomic and population genetic tools for the Silene research community...
  19. ncbi request reprint Testing for selection on synonymous sites in plant mitochondrial DNA: the role of codon bias and RNA editing
    Daniel B Sloan
    Department of Biology, University of Virginia, Charlottesville, VA 22904, USA
    J Mol Evol 70:479-91. 2010
    ..Nevertheless, there are important nucleotide composition patterns (particularly the differences between synonymous sites and non-coding DNA) that remain largely unexplained...
  20. ncbi request reprint Evidence for multiple Pleistocene refugia in the postglacial expansion of the eastern tiger salamander, Ambystoma tigrinum tigrinum
    Sheri A Church
    University of Virginia, Department of Biology, Charlottesville, Virginia 22903, USA
    Evolution 57:372-83. 2003
    ..Therefore, these disjunct populations are not of recent origin, but rather exist as relicts of a warmer, more widespread fauna and flora that is now restricted to the Coastal Plain...
  21. ncbi request reprint The phylogenetics of Desmognathine salamander populations across the southern Appalachians
    Leslie J Rissler
    Department of Biology, University of Virginia, 22904 4328, Charlottesville, VA, USA
    Mol Phylogenet Evol 27:197-211. 2003
    ....
  22. pmc Accelerated mutation accumulation in asexual lineages of a freshwater snail
    Maurine Neiman
    Department of Biology, Roy J Carver Center for Comparative Genomics, University of Iowa, Iowa, USA
    Mol Biol Evol 27:954-63. 2010
    ....
  23. pmc Genealogical evidence for epidemics of selfish genes
    Par K Ingvarsson
    Department of Biology, Gilmer Hall, University of Virginia, PO Box 400328, Charlottesville, VA 22904 4328, USA
    Proc Natl Acad Sci U S A 99:11265-9. 2002
    ....
  24. doi request reprint History, chance and adaptation during biological invasion: separating stochastic phenotypic evolution from response to selection
    Stephen R Keller
    Department of Biology, University of Virginia, Charlottesville, VA 22904 4328, USA
    Ecol Lett 11:852-66. 2008
    ..F(ST)). Designs that incorporate a null expectation can reveal the role of history and chance in the evolutionary process, and provide greater insights into evolution during species invasions...
  25. ncbi request reprint The evolution of reproductive isolation in spatially structured populations
    Sheri A Church
    University of Virginia, Department of Biology, Charlottesville 22904, USA
    Evolution 56:1859-62. 2002
    ....
  26. ncbi request reprint Evolutionary rate variation at multiple levels of biological organization in plant mitochondrial DNA
    Daniel B Sloan
    Mol Biol Evol 25:243-6. 2008
    ..Additionally, they should alter our interpretation of many common phylogenetic and population genetic analyses...