P Tarczy-Hornoch

Summary

Affiliation: University of Washington
Country: USA

Publications

  1. pmc Evaluating the accuracy of a functional SNP annotation system
    Terry H Shen
    Departments of Biomedical and Health Informatics, University of Washington, Seattle, WA, USA
    BMC Bioinformatics 10:S11. 2009
  2. pmc On the persistence of supplementary resources in biomedical publications
    Nicholas R Anderson
    Division of Biomedical Health Informatics, University of Washington, USA
    BMC Bioinformatics 7:260. 2006
  3. ncbi request reprint Surfactant replacement increases compliance in premature lamb lungs during partial liquid ventilation in situ
    P Tarczy-Hornoch
    Departments of Pediatrics, Medicine, and Physiology Biophysics, University of Washington, Seattle, Washington 98195, USA
    J Appl Physiol 84:1316-22. 1998
  4. pmc GeneClinics: a hybrid text/data electronic publishing model using XML applied to clinical genetic testing
    P Tarczy-Hornoch
    Department of Pediatrics, University of Washington, Seattle 98195 6320, USA
    J Am Med Inform Assoc 7:267-76. 2000
  5. ncbi request reprint A qualitative study of the implementation of a bioinformatics tool in a biological research laboratory
    Nicholas R Anderson
    Department of Biomedical and Health Informatics, University of Washington, P O Box 357240, Seattle, WA 98195 7240, United States
    Int J Med Inform 76:821-8. 2007
  6. pmc The University of Washington Health Sciences Library BioCommons: an evolving Northwest biomedical research information support infrastructure
    Mark Minie
    Health Sciences Libraries and Information Center and Department of Biomedical and Health Informatics, University of Washington, Seattle, USA
    J Med Libr Assoc 94:321-9. 2006
  7. ncbi request reprint Data integration and genomic medicine
    Brenton Louie
    Department of Medical Education and Biomedical Informatics, University of Washington, Seattle, USA
    J Biomed Inform 40:5-16. 2007
  8. ncbi request reprint Incorporating ideas from computer-supported cooperative work
    Wanda Pratt
    School of Management and Information Systems, University of Missouri, Rolla, MO, USA
    J Biomed Inform 37:128-37. 2004
  9. ncbi request reprint Resident documentation discrepancies in a neonatal intensive care unit
    Aaron E Carroll
    Robert Wood Johnson Clinical Scholars Program, University of Washington, Seattle, Washington 98195 7183, USA
    Pediatrics 111:976-80. 2003
  10. pmc Issues in biomedical research data management and analysis: needs and barriers
    Nicholas R Anderson
    University of Washington, Department of Medical Education and Biomedical Informatics, Box 357240, Seattle, WA 98195 7420, USA
    J Am Med Inform Assoc 14:478-88. 2007

Research Grants

  1. GENESEEK: DATA INTEGRATION SYSTEM FOR GENETIC DATABASES
    Peter Tarczy Hornoch; Fiscal Year: 2002
  2. BioMediator: Biologic Data Integration& Analysis System
    Peter Tarczy Hornoch; Fiscal Year: 2005

Detail Information

Publications20

  1. pmc Evaluating the accuracy of a functional SNP annotation system
    Terry H Shen
    Departments of Biomedical and Health Informatics, University of Washington, Seattle, WA, USA
    BMC Bioinformatics 10:S11. 2009
    ..To evaluate the SNPit system, we developed an alternative gold standard to measure accuracy using sensitivity and specificity. The results of our evaluation demonstrated that our alternative gold standard produced encouraging results...
  2. pmc On the persistence of supplementary resources in biomedical publications
    Nicholas R Anderson
    Division of Biomedical Health Informatics, University of Washington, USA
    BMC Bioinformatics 7:260. 2006
    ..One aspect of this problem can be demonstrated by evaluating the persistence of supplementary data associated with published biomedical papers...
  3. ncbi request reprint Surfactant replacement increases compliance in premature lamb lungs during partial liquid ventilation in situ
    P Tarczy-Hornoch
    Departments of Pediatrics, Medicine, and Physiology Biophysics, University of Washington, Seattle, Washington 98195, USA
    J Appl Physiol 84:1316-22. 1998
    ....
  4. pmc GeneClinics: a hybrid text/data electronic publishing model using XML applied to clinical genetic testing
    P Tarczy-Hornoch
    Department of Pediatrics, University of Washington, Seattle 98195 6320, USA
    J Am Med Inform Assoc 7:267-76. 2000
    ..The ultimate goal is to have an entry in GeneClinics for each entry in the GeneTests directory of medical genetics laboratories-that is, for each disease for which clinical genetic testing is available...
  5. ncbi request reprint A qualitative study of the implementation of a bioinformatics tool in a biological research laboratory
    Nicholas R Anderson
    Department of Biomedical and Health Informatics, University of Washington, P O Box 357240, Seattle, WA 98195 7240, United States
    Int J Med Inform 76:821-8. 2007
    ..To explore how the implementation of a comprehensive new bioinformatics analysis system would affect workflow, collaboration and information management in a small genetic research lab...
  6. pmc The University of Washington Health Sciences Library BioCommons: an evolving Northwest biomedical research information support infrastructure
    Mark Minie
    Health Sciences Libraries and Information Center and Department of Biomedical and Health Informatics, University of Washington, Seattle, USA
    J Med Libr Assoc 94:321-9. 2006
    ....
  7. ncbi request reprint Data integration and genomic medicine
    Brenton Louie
    Department of Medical Education and Biomedical Informatics, University of Washington, Seattle, USA
    J Biomed Inform 40:5-16. 2007
    ..We conclude this paper with challenges still not addressed in genomic medicine and gaps that remain in data integration research to facilitate genomic medicine...
  8. ncbi request reprint Incorporating ideas from computer-supported cooperative work
    Wanda Pratt
    School of Management and Information Systems, University of Missouri, Rolla, MO, USA
    J Biomed Inform 37:128-37. 2004
    ....
  9. ncbi request reprint Resident documentation discrepancies in a neonatal intensive care unit
    Aaron E Carroll
    Robert Wood Johnson Clinical Scholars Program, University of Washington, Seattle, Washington 98195 7183, USA
    Pediatrics 111:976-80. 2003
    ..Medical errors are common and potentially dangerous. Little is known about the role of documentation errors...
  10. pmc Issues in biomedical research data management and analysis: needs and barriers
    Nicholas R Anderson
    University of Washington, Department of Medical Education and Biomedical Informatics, Box 357240, Seattle, WA 98195 7420, USA
    J Am Med Inform Assoc 14:478-88. 2007
    ..A. Identify the current state of data management needs of academic biomedical researchers. B. Explore their anticipated data management and analysis needs. C. Identify barriers to addressing those needs...
  11. pmc Evaluation of probabilistic and logical inference for a SNP annotation system
    Terry H Shen
    Department of Biomedical and Health Informatics, University of Washington, Seattle, WA 98195 7240, USA
    J Biomed Inform 43:407-18. 2010
    ..Evaluations of the methods demonstrate the overall strong predictive value of logical, and logical with probabilistic, inference applied to the domain of SNP annotation...
  12. pmc SNPit: a federated data integration system for the purpose of functional SNP annotation
    Terry H Shen
    Department of Biomedical and Health Informatics, University of Washington, Seattle, WA 98195 7240, USA
    Comput Methods Programs Biomed 95:181-9. 2009
    ..A tool that can help to integrate and analyze the potential functional significance of SNPs is important for understanding the results from genome wide association studies...
  13. pmc Incorporating collaboratory concepts into informatics in support of translational interdisciplinary biomedical research
    E Sally Lee
    Division of Biomedical and Health Informatics, Department of Medical Education and Biomedical Informatics, University of Washington, Seattle, WA 98195 7420, USA
    Int J Med Inform 78:10-21. 2009
    ....
  14. pmc The potential for automated question answering in the context of genomic medicine: an assessment of existing resources and properties of answers
    Casey Lynnette Overby
    Department of Medical Education and Biomedical Informatics, University of Washington, Seattle, WA, USA
    BMC Bioinformatics 10:S8. 2009
    ....
  15. ncbi request reprint Participatory (re)design of a sociotechnical healthcare delivery system: the Group Health Patient-Centered Medical Home
    James T Tufano
    University of Washington School of Medicine, Seattle, Washington, USA
    Stud Health Technol Inform 157:59-65. 2010
    ..The emergent PCMH healthcare delivery system comprises both opportunistic point-of-care and outreach components, many of which leverage and enhance the organization's health information and communication technologies...
  16. pmc People and organizational issues in research systems implementation
    Joan S Ash
    Department of Medical Informatics and Clinical Epidemiology, School of Medicine, Oregon Health and Science University, 3181 SW Sam Jackson Park Road, Portland, OR 97239 3098, USA
    J Am Med Inform Assoc 15:283-9. 2008
    ..This article summarizes that discussion, which covered organizational issues, implications of how knowledge about clinical systems implementation can inform research systems implementation, and those issues unique to each kind of system...
  17. ncbi request reprint The effect of point-of-care personal digital assistant use on resident documentation discrepancies
    Aaron E Carroll
    Children s Health Services Research, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA
    Pediatrics 113:450-4. 2004
    ..We recently found documentation discrepancies in 60% of resident daily-progress notes with respect to patient weight, medications, or vascular lines. To what extent information systems can decrease such discrepancies is unknown...
  18. ncbi request reprint The BioMediator system as a data integration tool to answer diverse biologic queries
    Loren Donelson
    University of Washington, Seattle, WA 98195 7240, USA
    Stud Health Technol Inform 107:768-72. 2004
    ..Finally, we discuss the system's flexibility and generalized approach and give examples of how the system can be extended for a variety of objectives...
  19. ncbi request reprint GeneTests-GeneClinics: genetic testing information for a growing audience
    Roberta A Pagon
    University of Washington, Seattle, Washington, USA
    Hum Mutat 19:501-9. 2002
    ..The use of these combined resources has grown to approximately 3,200 visits/day...
  20. pmc Consumer health information on the Internet
    Aaron E Carroll
    J Am Med Inform Assoc 9:402-3; author reply 403-5. 2002

Research Grants6

  1. GENESEEK: DATA INTEGRATION SYSTEM FOR GENETIC DATABASES
    Peter Tarczy Hornoch; Fiscal Year: 2002
    ..abstract_text> ..
  2. BioMediator: Biologic Data Integration& Analysis System
    Peter Tarczy Hornoch; Fiscal Year: 2005
    ..abstract_text> ..