Naoko Shima

Summary

Affiliation: University of Minnesota
Country: USA

Publications

  1. pmc Phenotype-based identification of mouse chromosome instability mutants
    Naoko Shima
    The Jackson Laboratory, Bar Harbor, Maine 04609, USA
    Genetics 163:1031-40. 2003
  2. ncbi request reprint Forward genetic screens for meiotic and mitotic recombination-defective mutants in mice
    Laura Reinholdt
    The Jackson Laboratory, Bar Harbor, ME, USA
    Methods Mol Biol 262:87-107. 2004
  3. pmc The mouse genomic instability mutation chaos1 is an allele of Polq that exhibits genetic interaction with Atm
    Naoko Shima
    Department of Biomedical Sciences, College of Veterinary Medicine, Cornell University, 9th Fl Vet Research Tower, Ithaca, NY 14853, USA
    Mol Cell Biol 24:10381-9. 2004
  4. pmc The translesion DNA polymerase theta plays a dominant role in immunoglobulin gene somatic hypermutation
    Hong Zan
    Center for Immunology, School of Medicine and School of Biological Sciences, University of California, Irvine, CA, USA
    EMBO J 24:3757-69. 2005
  5. ncbi request reprint A viable allele of Mcm4 causes chromosome instability and mammary adenocarcinomas in mice
    Naoko Shima
    Department of Genetics, Cell Biology and Development, College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota 55455, USA
    Nat Genet 39:93-8. 2007
  6. pmc A concomitant loss of dormant origins and FANCC exacerbates genome instability by impairing DNA replication fork progression
    Spencer W Luebben
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA Molecular, Cellular, Developmental Biology and Genetics Program, University of Minnesota, Minneapolis, MN 55455, USA
    Nucleic Acids Res 42:5605-15. 2014
  7. pmc A reduction of licensed origins reveals strain-specific replication dynamics in mice
    Tsuyoshi Kawabata
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA
    Mamm Genome 22:506-17. 2011
  8. ncbi request reprint Genetic screen for chromosome instability in mice: Mcm4 and breast cancer
    Naoko Shima
    Department of Genetics, Cell Biology and Development, Medical School and College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota 55455, USA
    Cell Cycle 6:1135-40. 2007
  9. pmc Helq acts in parallel to Fancc to suppress replication-associated genome instability
    Spencer W Luebben
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA, Molecular, Cellular, Developmental Biology and Genetics Graduate Program, University of Minnesota, Minneapolis, MN 55455, USA, Masonic Cancer Center, Minneapolis, MN 55455, USA and College of Veterinary Medicine, University of Minnesota, St Paul, MN 55108, USA
    Nucleic Acids Res 41:10283-97. 2013
  10. pmc Stalled fork rescue via dormant replication origins in unchallenged S phase promotes proper chromosome segregation and tumor suppression
    Tsuyoshi Kawabata
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA
    Mol Cell 41:543-53. 2011

Collaborators

  • J Schimenti
  • Robert J Munroe
  • Spencer W Luebben
  • Tsuyoshi Kawabata
  • Satoru Yamaguchi
  • M Gerard O'Sullivan
  • Charles S Johnson
  • Ilze Matise
  • Tavanna Buske
  • Nathan A Steere
  • Hong Zan
  • Laura Reinholdt
  • Wai Long Lee
  • Monica K Akre
  • Marsha Wallace
  • Ivar Ilves
  • Michael R Botchan
  • Catherine A Andrews
  • Tomoka Nakamura
  • Ivan Liachko
  • Zhenming Xu
  • Yuan Zhong
  • Paolo Casali
  • Ahmed Al-Qahtani
  • Albert J Evinger Iii
  • Terry Ashley

Detail Information

Publications12

  1. pmc Phenotype-based identification of mouse chromosome instability mutants
    Naoko Shima
    The Jackson Laboratory, Bar Harbor, Maine 04609, USA
    Genetics 163:1031-40. 2003
    ....
  2. ncbi request reprint Forward genetic screens for meiotic and mitotic recombination-defective mutants in mice
    Laura Reinholdt
    The Jackson Laboratory, Bar Harbor, ME, USA
    Methods Mol Biol 262:87-107. 2004
    ..Both strategies have proved effective in identifying desired classes of mutations...
  3. pmc The mouse genomic instability mutation chaos1 is an allele of Polq that exhibits genetic interaction with Atm
    Naoko Shima
    Department of Biomedical Sciences, College of Veterinary Medicine, Cornell University, 9th Fl Vet Research Tower, Ithaca, NY 14853, USA
    Mol Cell Biol 24:10381-9. 2004
    ..These data suggest a unique role of Polq in maintaining genomic integrity, which is probably distinctive from the major homologous recombination pathway regulated by ATM...
  4. pmc The translesion DNA polymerase theta plays a dominant role in immunoglobulin gene somatic hypermutation
    Hong Zan
    Center for Immunology, School of Medicine and School of Biological Sciences, University of California, Irvine, CA, USA
    EMBO J 24:3757-69. 2005
    ....
  5. ncbi request reprint A viable allele of Mcm4 causes chromosome instability and mammary adenocarcinomas in mice
    Naoko Shima
    Department of Genetics, Cell Biology and Development, College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota 55455, USA
    Nat Genet 39:93-8. 2007
    ..These findings suggest that hypomorphic alleles of the genes encoding the subunits of the MCM2-7 complex may increase breast cancer risk...
  6. pmc A concomitant loss of dormant origins and FANCC exacerbates genome instability by impairing DNA replication fork progression
    Spencer W Luebben
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA Molecular, Cellular, Developmental Biology and Genetics Program, University of Minnesota, Minneapolis, MN 55455, USA
    Nucleic Acids Res 42:5605-15. 2014
    ....
  7. pmc A reduction of licensed origins reveals strain-specific replication dynamics in mice
    Tsuyoshi Kawabata
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA
    Mamm Genome 22:506-17. 2011
    ..Moreover, p53 is required for the development of mice that suffer from intrinsic replication stress...
  8. ncbi request reprint Genetic screen for chromosome instability in mice: Mcm4 and breast cancer
    Naoko Shima
    Department of Genetics, Cell Biology and Development, Medical School and College of Biological Sciences, University of Minnesota, Minneapolis, Minnesota 55455, USA
    Cell Cycle 6:1135-40. 2007
    ..These findings demonstrate, for the first time, the causative role of an Mcm mutation in cancer development. Furthermore, this raises the possibility that hypomorphic mutations in MCM2-7 genes may increase breast cancer risk in humans...
  9. pmc Helq acts in parallel to Fancc to suppress replication-associated genome instability
    Spencer W Luebben
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA, Molecular, Cellular, Developmental Biology and Genetics Graduate Program, University of Minnesota, Minneapolis, MN 55455, USA, Masonic Cancer Center, Minneapolis, MN 55455, USA and College of Veterinary Medicine, University of Minnesota, St Paul, MN 55108, USA
    Nucleic Acids Res 41:10283-97. 2013
    ..These findings suggest that mammalian HELQ contributes to genome stability in unchallenged conditions through a mechanism distinct from the function of FANCC. ..
  10. pmc Stalled fork rescue via dormant replication origins in unchallenged S phase promotes proper chromosome segregation and tumor suppression
    Tsuyoshi Kawabata
    Department of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, MN 55455, USA
    Mol Cell 41:543-53. 2011
    ..These findings suggest that dormant origins constitute a major pathway for stalled fork recovery, contributing to faithful chromosome segregation and tumor suppression...
  11. ncbi request reprint Functional screen of human MCM2-7 variant alleles for disease-causing potential
    Nathan A Steere
    Department of Genetics, Cell Biology and Development, College of Biological Sciences, Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55455, United States
    Mutat Res 666:74-8. 2009
    ..This screen identified a MCM5 variant allele with pathogenic potential. This allele deserves further investigations on its effect on cancer development in human populations...
  12. ncbi request reprint Methods for the detection of genome instability derived from replication stress in primary mouse embryonic fibroblasts
    Spencer W Luebben
    Department of Genetics, Cell Biology and Development, University of Minnesota, 6 160 Jackson Hall, 321 Church St SE, Minneapolis, MN, 55455, USA
    Methods Mol Biol 1194:341-52. 2014
    ..Then, we describe the cytokinesis-block micronucleus assay, which can be combined with detection of 53BP1 nuclear bodies to measure the levels of replication-associated genome instability carried over into G1 phase of the cell cycle. ..