Affiliation: University of California
- Searching for RNA genes using base-composition statisticsPeter Schattner
Center for Biomolecular Science and Engineering, 227 Sinsheimer Laboratories, University of California, 1156 High Street, Santa Cruz, CA 95064, USA
Nucleic Acids Res 30:2076-82. 2002..In addition, 19 candidate ncRNAs were identified including one with significant homology to several known archaeal RNaseP RNAs...
- Non-coding RNAs: hope or hype?Alexander Huttenhofer
Division of Genomics and RNomics, Innsbruck Medical University Biocenter, Fritz Pregl Strasse 3, 6020 Innsbruck, Austria
Trends Genet 21:289-97. 2005....
- Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genomePeter Schattner
Department of Biomolecular Engineering, University of California, Santa Cruz, 1156 High Street, Santa Cruz, CA 95064, USA
Nucleic Acids Res 32:4281-96. 2004..With this work, 41 of the 44 known pseudouridine modifications in S.cerevisiae rRNA have been linked with a verified snoRNA, providing the most complete accounting of the H/ACA snoRNAs that guide pseudouridylation in any species...
- Automated querying of genome databasesPeter Schattner
Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America
PLoS Comput Biol 3:e1. 2007
- The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAsPeter Schattner
Department of Biomolecular Engineering and the UCSC RNA Center, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95064, USA
Nucleic Acids Res 33:W686-9. 2005..The tRNAscan-SE, snoscan and snoGPS servers are available at http://lowelab.ucsc.edu/tRNAscan-SE/, http://lowelab.ucsc.edu/snoscan/ and http://lowelab.ucsc.edu/snoGPS/, respectively...
- A computational screen for mammalian pseudouridylation guide H/ACA RNAsPeter Schattner
Department of Biomolecular Engineering, UCSC RNA Center, University of California Santa Cruz, 1156 High St, Santa Cruz, Santa Cruz, CA 95064, USA
RNA 12:15-25. 2006..We also determined systematic syntenic conservation among human and mouse H/ACA RNAs. With this work, 82 of 97 ribosomal RNA pseudouridines and 18 of 32 spliceosomal RNA pseudouridines in mammals have been linked to H/ACA guide RNAs...
- The principles of guiding by RNA: chimeric RNA-protein enzymesAlexander Huttenhofer
Innsbruck Biocenter, Medical University Innsbruck, Fritz Pregl Strasse 3, 6020 Innsbruck, Austria
Nat Rev Genet 7:475-82. 2006....
- Genomics made easier: an introductory tutorial to genome dataminingPeter Schattner
Center for Biomolecular Science and Engineering, University of California, Santa Cruz, CA 95065, USA
Genomics 93:187-95. 2009..I also show why doing so typically is more effective than using alternative methods and indicate some of the resources available for learning more about the advanced capabilities of these powerful tools...
- The Bioperl toolkit: Perl modules for the life sciencesJason E Stajich
University Program in Genetics, Duke University, Durham, North Carolina 27710, USA
Genome Res 12:1611-8. 2002..We conclude with a discussion of how the open-source nature of the project has contributed to the development effort...
- eConsultingSiaw Teng Liaw
School of Rural Health, University of Melbourne, Shepparton, Victoria, Australia
Methods Mol Med 141:353-73. 2008....
- Using computer based templates for chronic disease managementHelen Bolger-Harris
School of Psychology, Deakin University, and Health Promotion Coordinator, Kingston Bayside Primary Care Partnership, Victoria
Aust Fam Physician 37:285-8. 2008..To develop these plans, GPs complete forms documenting goals and strategies using computer based templates...
- Therapist-assisted, Internet-based treatment for panic disorder: can general practitioners achieve comparable patient outcomes to psychologists?Kerrie Shandley
Swinburne University of Technology, Faculty of Life and Social Sciences, Mail H31, PO Box 218, Hawthorn, Victoria 3122, Australia
J Med Internet Res 10:e14. 2008..Evidence-based Internet interventions represent a potentially valuable resource to reduce the burden of care and the cost of managing mental health disorders within primary care settings and, at the same time, improve patient outcomes...
- Using computers to work smarter--a guide for GPsPeter Schattner
Department of General Practice, School of Primary Care, Monash University, Victoria
Aust Fam Physician 35:28-31. 2006..Computers have many uses in general practice, but to get the most out of them requires commitment of time and money...