INDRA SARKAR

Summary

Affiliation: University of Vermont
Country: USA

Publications

  1. ncbi Bioinformatics opportunities for identification and study of medicinal plants
    Vivekanand Sharma
    Department of Microbiology and Molecular Genetics, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 14:238-50. 2013
  2. ncbi Evaluation of biomedical informatics innovations and their impact on public health
    I N Sarkar
    Indra Neil Sarkar, PhD, MLIS, Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics and Department of Computer Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard, N309, Burlington, VT 05405, USA, E mail
    Methods Inf Med 51:93-4. 2012
  3. ncbi A vector space model approach to identify genetically related diseases
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 19:249-54. 2012
  4. ncbi GenBank and PubMed: How connected are they?
    Holly Miller
    MBLWHOI Library, Marine Biological Laboratory, 7 MBL Street, Woods Hole, MA 02543, USA
    BMC Res Notes 2:101. 2009
  5. ncbi Biomedical informatics and translational medicine
    Indra Neil Sarkar
    Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics, University of Vermont, College of Medicine, 89 Beaumont Ave, Given Courtyard N309, Burlington, VT 05405, USA
    J Transl Med 8:22. 2010
  6. ncbi The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy
    Ahmed Ragab Nabhan
    Center for Clinical and Translational Science, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 13:122-34. 2012
  7. ncbi Translational bioinformatics: linking knowledge across biological and clinical realms
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 18:354-7. 2011
  8. ncbi The Barcode of Life Data Portal: bridging the biodiversity informatics divide for DNA barcoding
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont, United States of America
    PLoS ONE 6:e14689. 2011

Research Grants

  1. Enhancing Organism Based Disease Knowledge Via Name Based Taxonomic Intelligence
    INDRA SARKAR; Fiscal Year: 2009
  2. Enhancing Organism Based Disease Knowledge Via Name Based Taxonomic Intelligence
    Indra N Sarkar; Fiscal Year: 2010

Collaborators

Detail Information

Publications8

  1. ncbi Bioinformatics opportunities for identification and study of medicinal plants
    Vivekanand Sharma
    Department of Microbiology and Molecular Genetics, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 14:238-50. 2013
    ..In particular, we highlight areas in medicinal plant research where the application of bioinformatics methodologies may result in quicker and potentially cost-effective leads toward finding plant-based remedies...
  2. ncbi Evaluation of biomedical informatics innovations and their impact on public health
    I N Sarkar
    Indra Neil Sarkar, PhD, MLIS, Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics and Department of Computer Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard, N309, Burlington, VT 05405, USA, E mail
    Methods Inf Med 51:93-4. 2012
    ..As such, the feature articles in this issue describe the evaluation of core infrastructure and fundamental informatics innovations as well as evaluation of informatics-based resources that are a core aspect of public health initiatives...
  3. ncbi A vector space model approach to identify genetically related diseases
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 19:249-54. 2012
    ..This study explored the relationship between diseases through the adaptation of an approach pioneered in the context of information retrieval: vector space models...
  4. ncbi GenBank and PubMed: How connected are they?
    Holly Miller
    MBLWHOI Library, Marine Biological Laboratory, 7 MBL Street, Woods Hole, MA 02543, USA
    BMC Res Notes 2:101. 2009
    ..g., PubMed), GenBank records associated with literature indexed in Medline are identifiable as they contain PubMed identifiers (PMIDs)...
  5. ncbi Biomedical informatics and translational medicine
    Indra Neil Sarkar
    Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics, University of Vermont, College of Medicine, 89 Beaumont Ave, Given Courtyard N309, Burlington, VT 05405, USA
    J Transl Med 8:22. 2010
    ..Based on contributions and advancements in each of these topic areas, the article proposes that biomedical informatics practitioners ("biomedical informaticians") can be essential members of translational medicine teams...
  6. ncbi The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy
    Ahmed Ragab Nabhan
    Center for Clinical and Translational Science, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 13:122-34. 2012
    ..This review summarizes progress to date in understanding the impact of taxon sampling on the accuracy of phylogenetic analysis...
  7. ncbi Translational bioinformatics: linking knowledge across biological and clinical realms
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 18:354-7. 2011
    ....
  8. ncbi The Barcode of Life Data Portal: bridging the biodiversity informatics divide for DNA barcoding
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont, United States of America
    PLoS ONE 6:e14689. 2011
    ....

Research Grants3

  1. Enhancing Organism Based Disease Knowledge Via Name Based Taxonomic Intelligence
    INDRA SARKAR; Fiscal Year: 2009
    ..Through regular collaboration events, such as annual workshops, the proposed research will continually evaluate the value of the deliverables and findings with a team of experts and potential beneficiaries from around the world. ..
  2. Enhancing Organism Based Disease Knowledge Via Name Based Taxonomic Intelligence
    Indra N Sarkar; Fiscal Year: 2010
    ..Through regular collaboration events, such as annual workshops, the proposed research will continually evaluate the value of the deliverables and findings with a team of experts and potential beneficiaries from around the world. ..