INDRA SARKAR

Summary

Affiliation: University of Vermont
Country: USA

Publications

  1. pmc People, organizational, and leadership factors impacting informatics support for clinical and translational research
    Philip R O Payne
    Department of Biomedical Informatics, The Ohio State University, Columbus, OH, USA
    BMC Med Inform Decis Mak 13:20. 2013
  2. ncbi request reprint Bringing genome tests into clinical practice
    I N Sarkar
    Center for Clinical and Translational Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405 USA E mail
    Yearb Med Inform 8:172-4. 2013
  3. pmc Origins of amyloid-β
    William G Tharp
    Center for Clinical and Translational Science, University of Vermont, Given Courtyard N309, 89 Beaumont Avenue, Burlington, VT 05405, USA
    BMC Genomics 14:290. 2013
  4. pmc Bioinformatics opportunities for identification and study of medicinal plants
    Vivekanand Sharma
    Center for Clinical and Translational Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 14:238-50. 2013
  5. ncbi request reprint Evaluation of biomedical informatics innovations and their impact on public health
    I N Sarkar
    Indra Neil Sarkar, PhD, MLIS, Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics and Department of Computer Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard, N309, Burlington, VT 05405, USA, E mail
    Methods Inf Med 51:93-4. 2012
  6. pmc A vector space model approach to identify genetically related diseases
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 19:249-54. 2012
  7. pmc The Barcode of Life Data Portal: bridging the biodiversity informatics divide for DNA barcoding
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont, United States of America
    PLoS ONE 6:e14689. 2011
  8. pmc Translational bioinformatics: linking knowledge across biological and clinical realms
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 18:354-7. 2011
  9. pmc The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy
    Ahmed Ragab Nabhan
    Center for Clinical and Translational Science, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 13:122-34. 2012
  10. pmc Biomedical informatics and translational medicine
    Indra Neil Sarkar
    Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics, University of Vermont, College of Medicine, 89 Beaumont Ave, Given Courtyard N309, Burlington, VT 05405, USA
    J Transl Med 8:22. 2010

Collaborators

Detail Information

Publications11

  1. pmc People, organizational, and leadership factors impacting informatics support for clinical and translational research
    Philip R O Payne
    Department of Biomedical Informatics, The Ohio State University, Columbus, OH, USA
    BMC Med Inform Decis Mak 13:20. 2013
    ..At the same time, systematic evaluations of optimal people, organizational, and leadership factors that influence the provision of data, information, and knowledge management technologies and methods are notably lacking...
  2. ncbi request reprint Bringing genome tests into clinical practice
    I N Sarkar
    Center for Clinical and Translational Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405 USA E mail
    Yearb Med Inform 8:172-4. 2013
    ..To provide a review of recent progress in the use of genomic data in clinical contexts...
  3. pmc Origins of amyloid-β
    William G Tharp
    Center for Clinical and Translational Science, University of Vermont, Given Courtyard N309, 89 Beaumont Avenue, Burlington, VT 05405, USA
    BMC Genomics 14:290. 2013
    ....
  4. pmc Bioinformatics opportunities for identification and study of medicinal plants
    Vivekanand Sharma
    Center for Clinical and Translational Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 14:238-50. 2013
    ..In particular, we highlight areas in medicinal plant research where the application of bioinformatics methodologies may result in quicker and potentially cost-effective leads toward finding plant-based remedies...
  5. ncbi request reprint Evaluation of biomedical informatics innovations and their impact on public health
    I N Sarkar
    Indra Neil Sarkar, PhD, MLIS, Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics and Department of Computer Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard, N309, Burlington, VT 05405, USA, E mail
    Methods Inf Med 51:93-4. 2012
    ..As such, the feature articles in this issue describe the evaluation of core infrastructure and fundamental informatics innovations as well as evaluation of informatics-based resources that are a core aspect of public health initiatives...
  6. pmc A vector space model approach to identify genetically related diseases
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 19:249-54. 2012
    ..This study explored the relationship between diseases through the adaptation of an approach pioneered in the context of information retrieval: vector space models...
  7. pmc The Barcode of Life Data Portal: bridging the biodiversity informatics divide for DNA barcoding
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont, United States of America
    PLoS ONE 6:e14689. 2011
    ....
  8. pmc Translational bioinformatics: linking knowledge across biological and clinical realms
    Indra Neil Sarkar
    Center for Clinical and Translational Science, University of Vermont, Burlington, Vermont 05405, USA
    J Am Med Inform Assoc 18:354-7. 2011
    ....
  9. pmc The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy
    Ahmed Ragab Nabhan
    Center for Clinical and Translational Science, 89 Beaumont Avenue, Given Courtyard N309, Burlington, VT 05405, USA
    Brief Bioinform 13:122-34. 2012
    ..This review summarizes progress to date in understanding the impact of taxon sampling on the accuracy of phylogenetic analysis...
  10. pmc Biomedical informatics and translational medicine
    Indra Neil Sarkar
    Center for Clinical and Translational Science, Department of Microbiology and Molecular Genetics, University of Vermont, College of Medicine, 89 Beaumont Ave, Given Courtyard N309, Burlington, VT 05405, USA
    J Transl Med 8:22. 2010
    ..Based on contributions and advancements in each of these topic areas, the article proposes that biomedical informatics practitioners ("biomedical informaticians") can be essential members of translational medicine teams...
  11. pmc GenBank and PubMed: How connected are they?
    Holly Miller
    MBLWHOI Library, Marine Biological Laboratory, 7 MBL Street, Woods Hole, MA 02543, USA
    BMC Res Notes 2:101. 2009
    ..g., PubMed), GenBank records associated with literature indexed in Medline are identifiable as they contain PubMed identifiers (PMIDs)...

Research Grants3

  1. Enhancing Organism Based Disease Knowledge Via Name Based Taxonomic Intelligence
    INDRA SARKAR; Fiscal Year: 2009
    ..Through regular collaboration events, such as annual workshops, the proposed research will continually evaluate the value of the deliverables and findings with a team of experts and potential beneficiaries from around the world. ..
  2. Enhancing Organism Based Disease Knowledge Via Name Based Taxonomic Intelligence
    Indra N Sarkar; Fiscal Year: 2010
    ..Through regular collaboration events, such as annual workshops, the proposed research will continually evaluate the value of the deliverables and findings with a team of experts and potential beneficiaries from around the world. ..